Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11742
- Subject:
- XM_005263912.3
- Aligned Length:
- 5549
- Identities:
- 769
- Gaps:
- 4777
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGAAGCGGGCGGGAGGAGGAGCAACCGGAGCCACCACCGCCGCCGTCTCCACGTCCGCCGGGGCCGGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAACCTGCGGCCGCCCGTAGCGGGGGCCCGCGGAGCGCGGCCGCCGGCCTCCTAGGCGCGCTGCACCTGGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACCCTCGTAGTGGCTGCGGCGCGGGCCGAGAAGGAAGCATTCGTTCAGTCAGAGAGCATAATAGAAGTACTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGTTTTGATGATGGAGGGCTACTACAGACCGAGACAACACTTGGACTCAGTTCATATCAGCAGAAAAGTATATC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTCTACCGGGGGAATTGCAGGCCCATACGATTTGAGCCACCAATGCTGGATTTCCATGAACAACCAGTTGGAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCCAAAAATGGAAAAAGTCTACTTACATAATCCTAGTTCTGAAGAAACGATTACTTTAGTATCAATATCTGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAACATCACATTTTCATGCATCATTTTTTCAAAATAGGGTATTTGGTGTTGGAGTTCCAAATCCATATCGATT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGGCCGTTCCTTGGGGCCAGAGTCCCTGTGAATAGCAGTTTCTCACCTATAATAAACATCCACAATCCTCACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGAGCCTTTACAGGTTGTAGAAATGTACTCTAGTGGAGGAGACCTTCACCTAGAACTCCCAACGGGTCAACAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGAGGTACCAGAAAACTGTGGGAAATTCCTCCTTATGAAACCAAGGGAGTGATGAGAGCCAGTTTTTCATCTAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAAGCAGATAATCACACAGCCTTCATAAGAATAAAGACTAATGCTTCAGACAGCACAGAGTTTATCATTCTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGTTGAGGTTGAAGTTACAACAGCTCCTGGAATTTATTCCTCAACTGAAATGTTAGATTTTGGTACACTAAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACACAAGATCTACCAAAAGTTTTAAACCTTCATTTATTAAATTCAGGAACAAAAGATGTACCAATAACAAGTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCGACCTACACCACAAAATGATGCTATAACGGTACACTTTAAACCAATTACATTAAAAGCATCAGAAAGTAAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACACCAAGGTTGCAAGCATTAGTTTTGATGCATCGAAGGCAAAAAAGCCATCTCAGTTTTCTGGGAAAATAACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTTAAAGCAAAGGAAAAGAGTTATTCTAAACTTGAAATACCATATCAAGCAGAAGTTTTAGATGGTTATTTGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTTGATCATGCTGCAACATTATTTCACATCCGAGACAGCCCTGCTGATCCTGTGGAAAGGCCAATTTACCTTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTAACACTTTCAGTTTTGCGATCCTCATTCACGATGTGTTGCTACCAGAAGAAGCCAAAACAATGTTTAAAGTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACAACTTCAGCAAACCAGTCTTAATTCTTCCTAATGAATCAGGATACATTTTTACCCTGCTTTTTATGCCTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACATCATCCATGCACATTGATAACAACATTTTACTTATTACCAATGCTTCTAAATTTCATTTACCCGTGCGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TATACACAGGCTTTTTAGATTACTTTGTATTGCCCCCCAAAATAGAGGAACGTTTCATAGATTTTGGAGTACTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGCTACAGAAGCAAGTAATATTTTATTTGCAATTATAAACAGCAATCCAATTGAGTTGGCTATAAAAAGTTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCATATCATAGGAGACGGTTTATCAATAGAACTTGTAGCTGTGGAAAGAGGCAATAGAACTACAATAATTTCAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCCTGCCAGAGTTTGAAAAATCCTCTTTATCAGATCAATCATCGGTAACATTAGCTTCAGGCTATTTTGCAGTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTCAGAGTCAAACTTACTGCAAAAAAATTAGAGGGGATTCATGATGGAGCCATCCAGATCACAACAGACTATGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GATCCTGACAATCCCTGTGAAGGCTGTGATTGCAGTAGGCTCACTGACCTGCTTCCCTAAGCACGTGGTTCTTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CACCTTCCTTTCCAGGGAAAATAGTTCATCAAAGTTTAAATATTATGAATTCCTTCTCACAGAAGGTAAAAATA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGCAAATACGATCTTTGTCAGAAGATGTGCGATTTTACTATAAACGATTACGGGGCAATAAGGAAGACTTGGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCCAGGAAAAAAATCAAAGATTGCAAACATTTATTTTGATCCTGGACTACAGTGTGGGGATCATTGCTATGTTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCTTGCCTTTTCTATCCAAATCTGAACCCAAAGTGCAGCCTGGTGTAGCCATGCAGGAAGATATGTGGGATGCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACTGGGATTTGCATCAAAGCCTGTTCAAGGGATGGACAGGAATAAAGGAAAATTCAGGTCATAGATTGAGTGC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TATATTTGAAGTAAATACAGACCTTCAAAAAAATATAATATCAAAAATCACTGCTGAGCTCTCCTGGCCTTCCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TACTTAGCTCACCCCGGCACTTGAAATTTCCACTTACTAATACAAACTGCTCCTCAGAAGAAGAGATTACTTTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAAAATCCTGCAGATGTTCCTGTCTATGTTCAGTTTATTCCTCTGGCTTTATATTCCAACCCTTCAGTGTTTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGATAAGTTAGTATCAAGGTTTAACTTGAGTAAGGTGGCAAAGATAGATTTGAGAACACTAGAATTTCAAGTCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCAGAAACAGTGCTCATCCACTGCAGAGTTCAACAGGATTTATGGAGGGCCTCTCTCGACATTTAATTTTAAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTAATTTTAAAACCTGGAGAAAAGAAATCTGTCAAAGTAAAGTTTACTCCAGTTCACAACAGAACTGTTTCTTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACTTATCATAGTCAGAAATAACCTGACTGTGATGGATGCTGTGATGGTCCAAGGACAAGGAACAACTGAGAACT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGAGGGTGGCAGGCAAGCTTCCAGGTCCAGGAAGCTCCTTACGCTTTAAAATCACGGAAGCATTGTTAAAAGAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGTACAGATAGTTTAAAACTAAGAGAACCAAATTTCACATTGAAAAGAACATTTAAGGTAGAGAATACAGGACA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACTTCAAATTCACATAGAAACCATTGAAATCAGTGGATACTCATGTGAAGGATATGGCTTTAAAGTTGTTAATT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTCAAGAGTTTACTCTAAGTGCCAATGCTTCTAGAGATATAATCATATTGTTTACTCCTGATTTTACAGCTTCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AGAGTTATTCGGGAACTGAAGTTTATAACAACCAGTGGCTCTGAGTTTGTATTTATATTGAATGCATCCCTTCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTACCATATGTTAGCAACCTGTGCAGAAGCCCTACCCAGACCTAACTGGGAACTGGCTCTGTATATCATCATCT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGGAATAATGAGTGCACTGTTTCTTTTGGTCATTGGAACAGCCTATTTGGAAGCTCAAGGAATATGGGAGCCA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTTCGAAGGCGGCTATCCTTTGAGGCCTCGAACCCGCCCTTCGATGTGGGAAGGCCATTTGATCTCAGGAGAAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CGTTGGTATTTCATCTGAAGGAAACTTGAACACACTCAGCTGTGACCCCGGTCACAGTAGGGGGTTCTGTGGAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CAGGCGGTTCATCATCCCGACCCAGTGCCGGGAGTCATAAGCAGTGTGGCCCATCGGTCCACCCACACAGCAGT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CACAGCAATAGAAACTCAGCTGACGTGGAAAACGTCAGAGCCAAAAACAGTTCAAGTACCTCTAGTAGGACTTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGCTCAAGCAGCTTCTTCACAGTCTGCTAACAAAACAAGCCCCCTTGTCTTAGATTCGAACACAGTGACTCAAG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GTCATACAGCGGGCAGAAAGTCCAAAGGGGCAAAGCAGAGCCAGCACGGCAGCCAGCACCATGCCCACAGCCCG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CTGGAGCAGCACCCTCAGCCTCCTCTGCCACCGCCAGTGCCTCAGCCCCAGGAGCCGCAGCCTGAAAGGCTGTC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 TCCCGCCCCCCTCGCACACCCTTCCCACCCAGAACGTGCCAGCAGCGCGAGGCACAGTTCCGAGGACTCGGACA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TCACCAGTCTCATAGAAGCCATGGACAAAGACTTCGACCACCATGACTCCCCAGCCCTAGAAGTGTTTACAGAG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CAGCCTCCATCGCCATTGCCAAAAAGCAAAGGGAAAGGAAAACCTCTTCAGCGCAAGGTGAAACCACCTAAGAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GCAAGAGGAAAAGGAGAAGAAGGGAAAGGGAAAGCCACAGGAAGATGAGCTGAAGGACTCTTTGGCTGATGATG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 ATAGCTCCTCCACCACCACAGAGACCTCCAACCCTGACACAGAACCGCTCCTCAAGGAGGATACAGAAAAGCAA 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AAGGGAAAACAAGCCATGCCTGAAAAACATGAAAGTGAAATGTCTCAAGTGAAGCAAAAAAGCAAAAAACTCTT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAATATTAAGAAAGAAATCCCAACAGATGTGAAACCCAGTTCATTAGAACTACCATATACTCCCCCTTTGGAAA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GTAAGCAACGTAGAAATCTCCCAAGCAAGATTCCTCTTCCAACTGCAATGACAAGTGGATCCAAATCACGAAAT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GCCCAGAAAACAAAAGGTACAAGTAAGTTAGTGGATAACAGACCACCTGCCCTAGCAAAATTCCTCCCGAATAG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TCAAGAATTAGGCAACACCAGTAGCTCAGAGGGTGAAAAAGACTCTCCTCCACCGGAGTGGGATTCCGTTCCAG 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 TTCACAAACCTGGCAGCTCTACTGATAGTCTTTATAAACTTTCTCTGCAAACCCTCAACGCAGACATTTTCTTA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 AAACAACGCCAGACCTCACCGACACCTGCTTCCCCGTCTCCCCCAGCTGCCCCCTGCCCCTTTGTGGCCCGGGG 4736
Query 1 ----------------------ATGAGTTCTCTCTTTGCTTCTTTTTCA--AGTGACCCTAAAATAAAACAGCC 50
|..||.|| || |||||||||||||||||||||||
Sbjct 4737 CAGCTACAGCAGCATCGTCAACAGCAGCTC-----------------CAGCAGTGACCCTAAAATAAAACAGCC 4793
Query 51 AAATGGAAGCAAACACAAGTTGACAAAGGCAGCCTCGCTCCCGGGCAAGAACGGCAACCCCACTTTTGCTGCAG 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4794 AAATGGAAGCAAACACAAGTTGACAAAGGCAGCCTCGCTCCCGGGCAAGAACGGCAACCCCACTTTTGCTGCAG 4867
Query 125 TCACGGCTGGCTACGACAAGAGCCCAGGTGGGAATGGCTTTGCTAAAGTTTCTTCAAACAAAACAGGTTTCTCC 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4868 TCACGGCTGGCTACGACAAGAGCCCAGGTGGGAATGGCTTTGCTAAAGTTTCTTCAAACAAAACAGGTTTCTCC 4941
Query 199 AGCAGCCTTGGCATTTCACACGCTCCTGTTGACAGCGATGGCTCAGACAGCTCGGGTTTGTGGAGTCCCGTCAG 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4942 AGCAGCCTTGGCATTTCACACGCTCCTGTTGACAGCGATGGCTCAGACAGCTCGGGTTTGTGGAGTCCCGTCAG 5015
Query 273 CAACCCAAGCAGCCCTGACTTCACTCCCCTCAATTCGTTCTCCGCCTTTGGAAACTCTTTTAATCTAACTGGTG 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5016 CAACCCAAGCAGCCCTGACTTCACTCCCCTCAATTCGTTCTCCGCCTTTGGAAACTCTTTTAATCTAACTGGTG 5089
Query 347 AAGTTTTCAGCAAACTCGGATTATCTCGATCGTGCAATCAGGCCTCACAGAGGAGCTGGAACGAGTTTAATAGT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5090 AAGTTTTCAGCAAACTCGGATTATCTCGATCGTGCAATCAGGCCTCACAGAGGAGCTGGAACGAGTTTAATAGT 5163
Query 421 GGCCCTTCATACCTTTGGGAGTCGCCAGCGACAGATCCCAGTCCTTCCTGGCCAGCCAGTTCCGGCTCCCCGAC 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5164 GGCCCTTCATACCTTTGGGAGTCGCCAGCGACAGATCCCAGTCCTTCCTGGCCAGCCAGTTCCGGCTCCCCGAC 5237
Query 495 CCACACAGCCACATCGGTCCTCGGTAACACCAGCGGCCTGTGGTCCACCACTCCATTCAGCAGCTCCATTTGGT 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5238 CCACACAGCCACATCGGTCCTCGGTAACACCAGCGGCCTGTGGTCCACCACTCCATTCAGCAGCTCCATTTGGT 5311
Query 569 CCAGCAACCTTAGCAGCGCCCTTCCCTTCACCACTCCAGCAAACACGCTGGCAAGCATCGGCCTCATGGGCACA 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5312 CCAGCAACCTTAGCAGCGCCCTTCCCTTCACCACTCCAGCAAACACGCTGGCAAGCATCGGCCTCATGGGCACA 5385
Query 643 GAAAACTCCCCTGCTCCTCACGCTCCCTCCACCTCCAGTCCAGCTGACGACTTGGGACAGACCTACAACCCGTG 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5386 GAAAACTCCCCTGCTCCTCACGCTCCCTCCACCTCCAGTCCAGCTGACGACTTGGGACAGACCTACAACCCGTG 5459
Query 717 GCGGATATGGAGCCCCACGATTGGAAGAAGAAGCTCGGACCCTTGGTCTAATTCGCACTTTCCTCACGAGAAT 789
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5460 GCGGATATGGAGCCCCACGATTGGAAGAAGAAGCTCGGACCCTTGGTCTAATTCGCACTTTCCTCACGAGAAT 5532
