Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11742
- Subject:
- XM_011510869.1
- Aligned Length:
- 5531
- Identities:
- 769
- Gaps:
- 4759
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGAAGCGGGCGGGAGGAGGAGCAACCGGAGCCACCACCGCCGCCGTCTCCACGTCCGCCGGGGCCGGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAACCTGCGGCCGCCCGTAGCGGGGGCCCGCGGAGCGCGGCCGCCGGCCTCCTAGGCGCGCTGCACCTGGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACCCTCGTAGTGGCTGCGGCGCGGGCCGAGAAGGAAGCATTCGTTCAGTCAGAGAGCATAATAGAAGTACTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGTTTTGATGATGGAGGGCTACTACAGATCCTTTGCATTGAGTATCTGCTTATCTTTCACAAGACAGCTTCCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATTTACCGAGACAACACTTGGACTCAGTTCATATCAGCAGAAAAGTATATCTCTCTACCGGGGGAATTGCAGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCATACGATTTGAGCCACCAATGCTGGATTTCCATGAACAACCAGTTGGAATGCCAAAAATGGAAAAAGTCTAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTACATAATCCTAGTTCTGAAGAAACGATTACTTTAGTATCAATATCTGCTACAACATCACATTTTCATGCATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATTTTTTCAAAATAGGAAAATTCTTCCAGGAGGAAATACATCATTTGATGTAGTTTTTCTTGCAAGAGTAGTAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAAATGTAGAAAATACTTTATTTATTAATACATCTAATCATGGGGTATTTACTTACCAGGTATTTGGTGTTGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTCCAAATCCATATCGATTGAGGCCGTTCCTTGGGGCCAGAGTCCCTGTGAATAGCAGTTTCTCACCTATAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAACATCCACAATCCTCACAGTGAGCCTTTACAGGTTGTAGAAATGTACTCTAGTGGAGGAGACCTTCACCTAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACTCCCAACGGGTCAACAAGGAGGTACCAGAAAACTGTGGGAAATTCCTCCTTATGAAACCAAGGGAGTGATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGAGCCAGTTTTTCATCTAGAGAAGCAGATAATCACACAGCCTTCATAAGAATAAAGACTAATGCTTCAGACAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACAGAGTTTATCATTCTTCCTGTTGAGGTTGAAGTTACAACAGCTCCTGGAATTTATTCCTCAACTGAAATGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAGATTTTGGTACACTAAGAACACAAGATCTACCAAAAGTTTTAAACCTTCATTTATTAAATTCAGGAACAAAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATGTACCAATAACAAGTGTTCGACCTACACCACAAAATGATGCTATAACGGTACACTTTAAACCAATTACATT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAAGCATCAGAAAGTAAATACACCAAGGTTGCAAGCATTAGTTTTGATGCATCGAAGGCAAAAAAGCCATCTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTTTTCTGGGAAAATAACAGTTAAAGCAAAGGAAAAGAGTTATTCTAAACTTGAAATACCATATCAAGCAGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GTTTTAGATGGTTATTTGGGATTTGATCATGCTGCAACATTATTTCACATCCGAGACAGCCCTGCTGATCCTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGAAAGGCCAATTTACCTTACTAACACTTTCAGTTTTGCGATCCTCATTCACGATGTGTTGCTACCAGAAGAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAAAACAATGTTTAAAGTTCACAACTTCAGCAAACCAGTCTTAATTCTTCCTAATGAATCAGGATACATTTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACCCTGCTTTTTATGCCTTCCACATCATCCATGCACATTGATAACAACATTTTACTTATTACCAATGCTTCTAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATTTCATTTACCCGTGCGGGTATACACAGGCTTTTTAGATTACTTTGTATTGCCCCCCAAAATAGAGGAACGTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCATAGATTTTGGAGTACTGAGTGCTACAGAAGCAAGTAATATTTTATTTGCAATTATAAACAGCAATCCAATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGTTGGCTATAAAAAGTTGGCATATCATAGGAGACGGTTTATCAATAGAACTTGTAGCTGTGGAAAGAGGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TAGAACTACAATAATTTCAAGCCTGCCAGAGTTTGAAAAATCCTCTTTATCAGATCAATCATCGGTAACATTAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTCAGGCTATTTTGCAGTCTTCAGAGTCAAACTTACTGCAAAAAAATTAGAGGGGATTCATGATGGAGCCATC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGATCACAACAGACTATGAGATCCTGACAATCCCTGTGAAGGCTGTGATTGCAGTAGGCTCACTGACCTGCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCTAAGCACGTGGTTCTTCCACCTTCCTTTCCAGGGAAAATAGTTCATCAAAGTTTAAATATTATGAATTCCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCTCACAGAAGGTAAAAATACAGCAAATACGATCTTTGTCAGAAGATGTGCGATTTTACTATAAACGATTACGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GGCAATAAGGAAGACTTGGAGCCAGGAAAAAAATCAAAGATTGCAAACATTTATTTTGATCCTGGACTACAGTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGGGGATCATTGCTATGTTGGCTTGCCTTTTCTATCCAAATCTGAACCCAAAGTGCAGCCTGGTGTAGCCATGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGAAGATATGTGGGATGCTGACTGGGATTTGCATCAAAGCCTGTTCAAGGGATGGACAGGAATAAAGGAAAAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCAGGTCATAGATTGAGTGCTATATTTGAAGTAAATACAGACCTTCAAAAAAATATAATATCAAAAATCACTGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGAGCTCTCCTGGCCTTCCATACTTAGCTCACCCCGGCACTTGAAATTTCCACTTACTAATACAAACTGCTCCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGAAGAAGAGATTACTTTAGAAAATCCTGCAGATGTTCCTGTCTATGTTCAGTTTATTCCTCTGGCTTTATAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCCAACCCTTCAGTGTTTGTAGATAAGTTAGTATCAAGGTTTAACTTGAGTAAGGTGGCAAAGATAGATTTGAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AACACTAGAATTTCAAGTCTTCAGAAACAGTGCTCATCCACTGCAGAGTTCAACAGGATTTATGGAGGGCCTCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTCGACATTTAATTTTAAACCTAATTTTAAAACCTGGAGAAAAGAAATCTGTCAAAGTAAAGTTTACTCCAGTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CACAACAGAACTGTTTCTTCACTTATCATAGTCAGAAATAACCTGACTGTGATGGATGCTGTGATGGTCCAAGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACAAGGAACAACTGAGAACTTGAGGGTGGCAGGCAAGCTTCCAGGTCCAGGAAGCTCCTTACGCTTTAAAATCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CGGAAGCATTGTTAAAAGATTGTACAGATAGTTTAAAACTAAGAGAACCAAATTTCACATTGAAAAGAACATTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAGGTAGAGAATACAGGACAACTTCAAATTCACATAGAAACCATTGAAATCAGTGGATACTCATGTGAAGGATA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGGCTTTAAAGTTGTTAATTGTCAAGAGTTTACTCTAAGTGCCAATGCTTCTAGAGATATAATCATATTTGCAC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGTTTCTTTTGGTCATTGGAACAGCCTATTTGGAAGCTCAAGGAATATGGGAGCCATTTCGAAGGCGGCTATCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTTGAGGCCTCGAACCCGCCCTTCGATGTGGGAAGGCCATTTGATCTCAGGAGAATCGTTGGTATTTCATCTGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGGAAACTTGAACACACTCAGCTGTGACCCCGGTCACAGTAGGGGGTTCTGTGGAGCAGGCGGTTCATCATCCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GACCCAGTGCCGGGAGTCATAAGCAGTGTGGCCCATCGGTCCACCCACACAGCAGTCACAGCAATAGAAACTCA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GCTGACGTGGAAAACGTCAGAGCCAAAAACAGTTCAAGTACCTCTAGTAGGACTTCTGCTCAAGCAGCTTCTTC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ACAGTCTGCTAACAAAACAAGCCCCCTTGTCTTAGATTCGAACACAGTGACTCAAGGTCATACAGCGGGCAGAA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGTCCAAAGGGGCAAAGCAGAGCCAGCACGGCAGCCAGCACCATGCCCACAGCCCGCTGGAGCAGCACCCTCAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CCTCCTCTGCCACCGCCAGTGCCTCAGCCCCAGGAGCCGCAGCCTGAAAGGCTGTCTCCCGCCCCCCTCGCACA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CCCTTCCCACCCAGAACGTGCCAGCAGCGCGAGGCACAGTTCCGAGGACTCGGACATCACCAGTCTCATAGAAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CCATGGACAAAGACTTCGACCACCATGACTCCCCAGCCCTAGAAGTGTTTACAGAGCAGCCTCCATCGCCATTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CCAAAAAGCAAAGGGAAAGGAAAACCTCTTCAGCGCAAGGTGAAACCACCTAAGAAGCAAGAGGAAAAGGAGAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GAAGGGAAAGGGAAAGCCACAGGAAGATGAGCTGAAGGACTCTTTGGCTGATGATGATAGCTCCTCCACCACCA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CAGAGACCTCCAACCCTGACACAGAACCGCTCCTCAAGGAGGATACAGAAAAGCAAAAGGGAAAACAAGCCATG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CCTGAAAAACATGAAAGTGAAATGTCTCAAGTGAAGCAAAAAAGCAAAAAACTCTTAAATATTAAGAAAGAAAT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CCCAACAGATGTGAAACCCAGTTCATTAGAACTACCATATACTCCCCCTTTGGAAAGTAAGCAACGTAGAAATC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TCCCAAGCAAGATTCCTCTTCCAACTGCAATGACAAGTGGATCCAAATCACGAAATGCCCAGAAAACAAAAGGT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 ACAAGTAAGTTAGTGGATAACAGACCACCTGCCCTAGCAAAATTCCTCCCGAATAGTCAAGAATTAGGCAACAC 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 CAGTAGCTCAGAGGGTGAAAAAGACTCTCCTCCACCGGAGTGGGATTCCGTTCCAGTTCACAAACCTGGCAGCT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 CTACTGATAGTCTTTATAAACTTTCTCTGCAAACCCTCAACGCAGACATTTTCTTAAAACAACGCCAGACCTCA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 CCGACACCTGCTTCCCCGTCTCCCCCAGCTGCCCCCTGCCCCTTTGTGGCCCGGGGCAGCTACAGCAGCATCGT 4736
Query 1 ----ATGAGTTCTCTCTTTGCTTCTTTTTCA--AGTGACCCTAAAATAAAACAGCCAAATGGAAGCAAACACAA 68
|..||.|| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 CAACAGCAGCTC-----------------CAGCAGTGACCCTAAAATAAAACAGCCAAATGGAAGCAAACACAA 4793
Query 69 GTTGACAAAGGCAGCCTCGCTCCCGGGCAAGAACGGCAACCCCACTTTTGCTGCAGTCACGGCTGGCTACGACA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4794 GTTGACAAAGGCAGCCTCGCTCCCGGGCAAGAACGGCAACCCCACTTTTGCTGCAGTCACGGCTGGCTACGACA 4867
Query 143 AGAGCCCAGGTGGGAATGGCTTTGCTAAAGTTTCTTCAAACAAAACAGGTTTCTCCAGCAGCCTTGGCATTTCA 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4868 AGAGCCCAGGTGGGAATGGCTTTGCTAAAGTTTCTTCAAACAAAACAGGTTTCTCCAGCAGCCTTGGCATTTCA 4941
Query 217 CACGCTCCTGTTGACAGCGATGGCTCAGACAGCTCGGGTTTGTGGAGTCCCGTCAGCAACCCAAGCAGCCCTGA 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4942 CACGCTCCTGTTGACAGCGATGGCTCAGACAGCTCGGGTTTGTGGAGTCCCGTCAGCAACCCAAGCAGCCCTGA 5015
Query 291 CTTCACTCCCCTCAATTCGTTCTCCGCCTTTGGAAACTCTTTTAATCTAACTGGTGAAGTTTTCAGCAAACTCG 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5016 CTTCACTCCCCTCAATTCGTTCTCCGCCTTTGGAAACTCTTTTAATCTAACTGGTGAAGTTTTCAGCAAACTCG 5089
Query 365 GATTATCTCGATCGTGCAATCAGGCCTCACAGAGGAGCTGGAACGAGTTTAATAGTGGCCCTTCATACCTTTGG 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5090 GATTATCTCGATCGTGCAATCAGGCCTCACAGAGGAGCTGGAACGAGTTTAATAGTGGCCCTTCATACCTTTGG 5163
Query 439 GAGTCGCCAGCGACAGATCCCAGTCCTTCCTGGCCAGCCAGTTCCGGCTCCCCGACCCACACAGCCACATCGGT 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5164 GAGTCGCCAGCGACAGATCCCAGTCCTTCCTGGCCAGCCAGTTCCGGCTCCCCGACCCACACAGCCACATCGGT 5237
Query 513 CCTCGGTAACACCAGCGGCCTGTGGTCCACCACTCCATTCAGCAGCTCCATTTGGTCCAGCAACCTTAGCAGCG 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5238 CCTCGGTAACACCAGCGGCCTGTGGTCCACCACTCCATTCAGCAGCTCCATTTGGTCCAGCAACCTTAGCAGCG 5311
Query 587 CCCTTCCCTTCACCACTCCAGCAAACACGCTGGCAAGCATCGGCCTCATGGGCACAGAAAACTCCCCTGCTCCT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5312 CCCTTCCCTTCACCACTCCAGCAAACACGCTGGCAAGCATCGGCCTCATGGGCACAGAAAACTCCCCTGCTCCT 5385
Query 661 CACGCTCCCTCCACCTCCAGTCCAGCTGACGACTTGGGACAGACCTACAACCCGTGGCGGATATGGAGCCCCAC 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5386 CACGCTCCCTCCACCTCCAGTCCAGCTGACGACTTGGGACAGACCTACAACCCGTGGCGGATATGGAGCCCCAC 5459
Query 735 GATTGGAAGAAGAAGCTCGGACCCTTGGTCTAATTCGCACTTTCCTCACGAGAAT 789
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5460 GATTGGAAGAAGAAGCTCGGACCCTTGGTCTAATTCGCACTTTCCTCACGAGAAT 5514
