Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11745
Subject:
NM_001286418.1
Aligned Length:
1087
Identities:
783
Gaps:
251

Alignment

Query    1  ATGGAGAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTT  74
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAGAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTT  74

Query   75  TACTACCATCCCATTTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACT  148
            ||||||||||||.||.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||
Sbjct   75  TACTACCATCCCGTTCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACT  148

Query  149  ATGCCGGCCAGACCGGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAA  221
            ||||||||||||||.||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||
Sbjct  149  ATGCCGGCCAGACCAGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAA  221

Query  222  CTCACCCAGCACACAAAATGGATCTCTTACGACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACAC  295
            .||||||||||..||.|||||||||||.||                                            
Sbjct  222  TTCACCCAGCAACCAGAATGGATCTCTCAC--------------------------------------------  251

Query  296  AAAGTAGTGAAAATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGG  369
                                                                                      
Sbjct  252  --------------------------------------------------------------------------  251

Query  370  GACCCTGACCTCCGGCAGATGTTTGGGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGC  443
                                                                                      
Sbjct  252  --------------------------------------------------------------------------  251

Query  444  CAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGA  517
                                                         ||||||||||||.||||||||.||.||||
Sbjct  252  ---------------------------------------------GGTGAATAATGCAACAGCACGGGTCATGA  280

Query  518  CCAATAAGAAGATGGTCACACCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCG  591
            ||||.||||||||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.||||||||.
Sbjct  281  CCAACAAGAAGATGGTCACGCCATATGCAAATGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCT  354

Query  592  GAGTTATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAG  665
            |||||||||||||||||||||||||||||.||||||||||||||||||||.||.||.||||||.|.||||||||
Sbjct  355  GAGTTATATGCAGCATCCAGCTTTCAAGCTGATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAG  428

Query  666  AGGGGGTATCAACACTTACATTCCTTTAATCA------------TTCCTGGCTTCCCTTACCCTACTGCAGCCA  727
            |||.||.||||||||||||||.|||.||||||            |||||||||||||||||||.||||||||||
Sbjct  429  AGGAGGCATCAACACTTACATCCCTCTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAACTGCAGCCA  502

Query  728  CCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTA  801
            ||||||||||.||||||.|||||||||||.||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  503  CCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTA  576

Query  802  CCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATGGTGG  875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  577  CCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATGGTGG  650

Query  876  ATATGCAGCCTACAGATATGCACAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCAGCCGCTGTAGCCGCTT  949
            ||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||.||||||||
Sbjct  651  ATATGCAGCCTACAGATATGCACAGCCTGCTACTGCAACCGCAGCCACAGCTGCTGCAGCCGCTGCAGCCGCTT  724

Query  950  ACAGTGACGGTTATGGCAGGGTGTACACAGCCGACCCCTACCATGCCCTTGCCCCTGCCGCTAGCTATGGAGTT  1023
            ||||.||||||||.|||||||||||||||||.|||||||||||||||||.|||||||||||.||||||||||||
Sbjct  725  ACAGCGACGGTTACGGCAGGGTGTACACAGCTGACCCCTACCATGCCCTCGCCCCTGCCGCCAGCTATGGAGTT  798

Query 1024  GGCGCTGTGGCGAGTTTATACCGAGGTGGCTACAGCCGATTTGCCCCCTAC  1074
            |||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  799  GGCGCTGTGGCGAGTTTGTACCGAGGTGGCTACAGCCGATTTGCCCCCTAC  849

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