Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11745
• Subject: XM_006521564.3
• Aligned Length: 1499
• Identities: 939
• Gaps: 460

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  ---------------------------------------------------------ATGGAGAAAAAGAAA--  15
                                                                     |||||.....||.||  
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG  222

Query   16  -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT  88
             ||||    .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  223  GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT  292

Query   89  TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC  162
            |.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct  293  TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC  366

Query  163  GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC  235
            .||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct  367  AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC  439

Query  236  AAAATGGATCTCTTAC---GACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAA  306
            |.|||||||||||.||   |||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct  440  AGAATGGATCTCTCACGCAGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAA  513

Query  307  AATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCT  380
            ||||||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  514  AATTCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCT  587

Query  381  CCGGCAGATGTTTGG------------------------------------------------------GGGAT  400
            |||||||||||||||                                                      |||||
Sbjct  588  CCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGAT  661

Query  401  TCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAG  474
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  662  TCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAG  735

Query  475  GGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAA  548
            ||||||||||||||||||||||||||.||||||||.||.||||||||.||||||||||||||.|||||||||||
Sbjct  736  GGCCGTAAAATCGAGGTGAATAATGCAACAGCACGGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAA  809

Query  549  TGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAG  622
            |||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|
Sbjct  810  TGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTG  883

Query  623  ATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATC  696
            |||||||||||||||||||.||.||.||||||.|.|||||||||||.||.||||||||||||||.|||.|||||
Sbjct  884  ATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATC  957

Query  697  A------------TTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTT  758
            |            |||||||||||||||||||.||||||||||||||||||||.||||||.|||||||||||.|
Sbjct  958  AGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAACTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCT  1031

Query  759  GAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTG  832
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032  GAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTG  1105

Query  833  TGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTAT---GGTG--GATATG---------CAGCCTA-----  887
            ||||||||||||||||||||||||||||||||||||||   |.||  ||.|||         ||..|||     
Sbjct 1106  TGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCT  1179

Query  888  -------------------------CAGATATGCACAGCCT--GCTACTGC--------------AACCGCA--  918
                                     |.||||| .|||| .|  |.||||||              ||   ||  
Sbjct 1180  CTCAGTGGAGTCTCTGTTCCCTTCTCTGATAT-AACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATT  1248

Query  919  ---------GCCACCGCTGCTGCAGCCGCTGTAGCCGC-----TTAC------------------AGTGAC---  957
                     ||||..|||       |.|.||    .||     ||||                  ||.|||   
Sbjct 1249  GTGGTATGGGCCAGGGCT-------CGGGTG----GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAG  1311

Query  958  -GGTTATGGCAGGG--TGT--ACACA---GCCGAC---------CC---CTACCATGCCCTTGCCCCTGC-CGC  1010
             .||||.||.|.||  |||  ||.||   |..|||         ||   .|||||.|.|.|||...|||| |||
Sbjct 1312  TTGTTAGGGTATGGAATGTTAACTCAAGTGGTGACTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGC  1385

Query 1011  TAGCTATGGAGTTGGCGCTGTGGCGAGTTTA---TACCGAG---GTGGCTACAG-----------CCGATTTGC  1067
            |  ||| |.|.|||..||||||       ||   .||||||   |||| ||.||           |||.|.|  
Sbjct 1386  T--CTA-GTAATTGAGGCTGTG-------TACTTCACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT--  1446

Query 1068  CCCCTAC------------  1074
             |||.|.            
Sbjct 1447  -CCCAAGAGAATGCTGGGA  1464