Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11745
• Subject: XM_006521565.3
• Aligned Length: 1496
• Identities: 939
• Gaps: 457

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  ---------------------------------------------------------ATGGAGAAAAAGAAA--  15
                                                                     |||||.....||.||  
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG  222

Query   16  -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT  88
             ||||    .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  223  GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT  292

Query   89  TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC  162
            |.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct  293  TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC  366

Query  163  GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC  235
            .||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct  367  AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC  439

Query  236  AAAATGGATCTCTTACGACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAAAAT  309
            |.|||||||||||.|||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||
Sbjct  440  AGAATGGATCTCTCACGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAAAAT  513

Query  310  TCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCTCCG  383
            |||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.||||||||||||||
Sbjct  514  TCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCTCCG  587

Query  384  GCAGATGTTTGG------------------------------------------------------GGGATTCG  403
            ||||||||||||                                                      ||||||||
Sbjct  588  GCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGATTCG  661

Query  404  GGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAGGGC  477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  662  GGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAGGGC  735

Query  478  CGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAATGG  551
            |||||||||||||||||||||||.||||||||.||.||||||||.||||||||||||||.||||||||||||||
Sbjct  736  CGTAAAATCGAGGTGAATAATGCAACAGCACGGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAATGG  809

Query  552  TTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATG  625
            .|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.||||
Sbjct  810  CTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTGATG  883

Query  626  TGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATCA--  697
            ||||||||||||||||.||.||.||||||.|.|||||||||||.||.||||||||||||||.|||.||||||  
Sbjct  884  TGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATCAGT  957

Query  698  ----------TTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAG  761
                      |||||||||||||||||||.||||||||||||||||||||.||||||.|||||||||||.||||
Sbjct  958  CTCCCTTTAGTTCCTGGCTTCCCTTACCCAACTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAG  1031

Query  762  GGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGG  835
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032  GGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGG  1105

Query  836  TTTACCAGGACGGATTTTACGGTGCTGACCTCTAT---GGTG--GATATG---------CAGCCTA--------  887
            |||||||||||||||||||||||||||||||||||   |.||  ||.|||         ||..|||        
Sbjct 1106  TTTACCAGGACGGATTTTACGGTGCTGACCTCTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCTCTC  1179

Query  888  ----------------------CAGATATGCACAGCCT--GCTACTGC--------------AACCGCA-----  918
                                  |.||||| .|||| .|  |.||||||              ||   ||     
Sbjct 1180  AGTGGAGTCTCTGTTCCCTTCTCTGATAT-AACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATTGTG  1248

Query  919  ------GCCACCGCTGCTGCAGCCGCTGTAGCCGC-----TTAC------------------AGTGAC----GG  959
                  ||||..|||       |.|.||    .||     ||||                  ||.|||    .|
Sbjct 1249  GTATGGGCCAGGGCT-------CGGGTG----GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAGTTG  1311

Query  960  TTATGGCAGGG--TGT--ACACA---GCCGAC---------CC---CTACCATGCCCTTGCCCCTGC-CGCTAG  1013
            |||.||.|.||  |||  ||.||   |..|||         ||   .|||||.|.|.|||...|||| ||||  
Sbjct 1312  TTAGGGTATGGAATGTTAACTCAAGTGGTGACTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGCT--  1383

Query 1014  CTATGGAGTTGGCGCTGTGGCGAGTTTA---TACCGAG---GTGGCTACAG-----------CCGATTTGCCCC  1070
            ||| |.|.|||..||||||       ||   .||||||   |||| ||.||           |||.|.|   ||
Sbjct 1384  CTA-GTAATTGAGGCTGTG-------TACTTCACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT---CC  1445

Query 1071  CTAC------------  1074
            |.|.            
Sbjct 1446  CAAGAGAATGCTGGGA  1461