Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11745
- Subject:
- XM_006521567.3
- Aligned Length:
- 1465
- Identities:
- 929
- Gaps:
- 443
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC 148
Query 1 --------------------------ATGGAGAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCCGACAACA 48
||| |||||||||||||||||.||||||
Sbjct 149 GCACAGAGGAGGCGGCCGACGGCGGGATG---------------------CAGGGTAACCAGGAGCCAACAACA 201
Query 49 ACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAGAATGGAATTCCCACAGA 122
||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||.|||||||||||||||||
Sbjct 202 ACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGTTCCCACCACCTCCACAAAATGGAATTCCCACAGA 275
Query 123 GTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACCGGTGAGCATAACCTGACACTCTACGGAAGTACGC 196
.|||||.||||||||||||||.||||||||||||||||||.||||.|||||||||||.||||||||.|||||||
Sbjct 276 ATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACCAGTGAACATAACCTGACCCTCTACGGGAGTACGC 349
Query 197 AAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACACAAAATGGATCTCTTAC---GACAGAAGGTGGAGC 266
|||| ||.||.||.|||||.|||||.||||||||||..||.|||||||||||.|| |||||||||||||||
Sbjct 350 -AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACCAGAATGGATCTCTCACGCAGACAGAAGGTGGAGC 422
Query 267 ACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAAAATTCAGAGAGTAAATCTACCCCGAAACGGCTGC 340
||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||.|
Sbjct 423 ACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAAAATTCAGAGAGTAAATCTACGCCCAAGCGACTAC 496
Query 341 ATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCTCCGGCAGATGTTTGG------------------- 395
||||||||||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 497 ATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTA 570
Query 396 -----------------------------------GGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGC 434
|||||||||||||||||||||||||||||||||||||||
Sbjct 571 GATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGC 644
Query 435 AGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCAC 508
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 645 AGACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCAACAGCAC 718
Query 509 GTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTA 582
|.||.||||||||.||||||||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.
Sbjct 719 GGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAATGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTG 792
Query 583 TATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCT 656
||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||.||.||.||||||.|
Sbjct 793 TATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTGATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTT 866
Query 657 ATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATCA------------TTCCTGGCTTCCCTTACCCTA 718
.|||||||||||.||.||||||||||||||.|||.|||||| |||||||||||||||||||.|
Sbjct 867 GTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAA 940
Query 719 CTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTC 792
|||||||||||||||||||.||||||.|||||||||||.||||||||||||||||||||||.||||||||||||
Sbjct 941 CTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTC 1014
Query 793 CGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCT 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 CGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCT 1088
Query 867 CTAT---GGTG--GATATG---------CAGCCTA------------------------------CAGATATGC 896
|||| |.|| ||.||| ||..||| |.||||| .
Sbjct 1089 CTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCTCTCAGTGGAGTCTCTGTTCCCTTCTCTGATAT-A 1161
Query 897 ACAGCCT--GCTACTGC--------------AACCGCA-----------GCCACCGCTGCTGCAGCCGCTGTAG 943
|||| .| |.|||||| || || ||||..||| |.|.||
Sbjct 1162 ACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATTGTGGTATGGGCCAGGGCT-------CGGGTG--- 1221
Query 944 CCGC-----TTAC------------------AGTGAC----GGTTATGGCAGGG--TGT--ACACA---GCCGA 983
.|| |||| ||.||| .||||.||.|.|| ||| ||.|| |..||
Sbjct 1222 -GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAGTTGTTAGGGTATGGAATGTTAACTCAAGTGGTGA 1294
Query 984 C---------CC---CTACCATGCCCTTGCCCCTGC-CGCTAGCTATGGAGTTGGCGCTGTGGCGAGTTTA--- 1041
| || .|||||.|.|.|||...|||| |||| ||| |.|.|||..|||||| ||
Sbjct 1295 CTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGCT--CTA-GTAATTGAGGCTGTG-------TACTT 1358
Query 1042 TACCGAG---GTGGCTACAG-----------CCGATTTGCCCCCTAC------------ 1074
.|||||| |||| ||.|| |||.|.| |||.|.
Sbjct 1359 CACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT---CCCAAGAGAATGCTGGGA 1413