Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11745
• Subject: XM_006521571.3
• Aligned Length: 1456
• Identities: 877
• Gaps: 467

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  ---------------------------------------------------------ATGGAGAAAAAGAAA--  15
                                                                     |||||.....||.||  
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG  222

Query   16  -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT  88
             ||||    .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  223  GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT  292

Query   89  TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC  162
            |.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct  293  TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC  366

Query  163  GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC  235
            .||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct  367  AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC  439

Query  236  AAAATGGATCTCTTAC---GACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAA  306
            |.|||||||||||.||   |||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct  440  AGAATGGATCTCTCACGCAGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAA  513

Query  307  AATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCT  380
            ||||||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  514  AATTCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCT  587

Query  381  CCGGCAGATGTTTGGGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAAT  454
            ||||||||||||||||     |.|.||.|.||..|.|.|||  .|||                      |||||
Sbjct  588  CCGGCAGATGTTTGGG-----CAGTTTGGCAAAATCCTAGA--TGTG----------------------GAAAT  632

Query  455  TA-----------CACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGA  517
            .|           |.||||.|                     |.|||||||||||||.||||||||.||.||||
Sbjct  633  AATCTTTAATGAGCGCGGCTC---------------------CAAGGTGAATAATGCAACAGCACGGGTCATGA  685

Query  518  CCAATAAGAAGATGGTCACACCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCG  591
            ||||.||||||||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.||||||||.
Sbjct  686  CCAACAAGAAGATGGTCACGCCATATGCAAATGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCT  759

Query  592  GAGTTATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAG  665
            |||||||||||||||||||||||||||||.||||||||||||||||||||.||.||.||||||.|.||||||||
Sbjct  760  GAGTTATATGCAGCATCCAGCTTTCAAGCTGATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAG  833

Query  666  AGGGGGTATCAACACTTACATTCCTTTAATCA------------TTCCTGGCTTCCCTTACCCTACTGCAGCCA  727
            |||.||.||||||||||||||.|||.||||||            |||||||||||||||||||.||||||||||
Sbjct  834  AGGAGGCATCAACACTTACATCCCTCTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAACTGCAGCCA  907

Query  728  CCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTA  801
            ||||||||||.||||||.|||||||||||.||||||||||||||||||||||.|||||||||||||||||||||
Sbjct  908  CCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTA  981

Query  802  CCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTAT---GG  872
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |.
Sbjct  982  CCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATTCAGC  1055

Query  873  TG--GATATG---------CAGCCTA------------------------------CAGATATGCACAGCCT--  903
            ||  ||.|||         ||..|||                              |.||||| .|||| .|  
Sbjct 1056  TGAAGAAATGTTAACATCTCACTCTAAATCTCTCAGTGGAGTCTCTGTTCCCTTCTCTGATAT-AACAG-ATGG  1127

Query  904  GCTACTGC--------------AACCGCA-----------GCCACCGCTGCTGCAGCCGCTGTAGCCGC-----  947
            |.||||||              ||   ||           ||||..|||       |.|.||    .||     
Sbjct 1128  GTTACTGCTTGTTATAATTATTAA---CATTGTGGTATGGGCCAGGGCT-------CGGGTG----GGCAAGAT  1187

Query  948  TTAC------------------AGTGAC----GGTTATGGCAGGG--TGT--ACACA---GCCGAC--------  984
            ||||                  ||.|||    .||||.||.|.||  |||  ||.||   |..|||        
Sbjct 1188  TTACTCCTCCTTTGGGCTGGGGAGGGACCAGTTGTTAGGGTATGGAATGTTAACTCAAGTGGTGACTGACTGTT  1261

Query  985  -CC---CTACCATGCCCTTGCCCCTGC-CGCTAGCTATGGAGTTGGCGCTGTGGCGAGTTTA---TACCGAG--  1048
             ||   .|||||.|.|.|||...|||| ||||  ||| |.|.|||..||||||       ||   .||||||  
Sbjct 1262  TCCGTAATACCAGGTCGTTGTGGCTGCACGCT--CTA-GTAATTGAGGCTGTG-------TACTTCACCGAGCT  1325

Query 1049  -GTGGCTACAG-----------CCGATTTGCCCCCTAC------------  1074
             |||| ||.||           |||.|.|   |||.|.            
Sbjct 1326  TGTGG-TAGAGCCTAGGGCAAACCGCTGT---CCCAAGAGAATGCTGGGA  1371