Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11752
Subject:
XM_017319134.1
Aligned Length:
1263
Identities:
685
Gaps:
489

Alignment

Query    1  ATGGCCTCGCGCTGGTGGCGGTGGCGGCGCGGCTGCTCCTGGAAGCCGGCGGCGCGGAGCCCCGGGCCCGGCTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCCCGGCCGTGCGGTACCGTTGGGGCCGAGCGCCGCTGCCGAAGTCCGCGCGCAGGTTCATAGGCGGAAGGGAC  148
                                                                               |.|..||
Sbjct    1  -------------------------------------------------------------------ATGACAC  7

Query  149  TTGACTTGT---CTCAGATACCCTATATTAATCTTGTGAAGCATTTAACATCTGCCTGTCCAAATGTATG--TC  217
            .|.||.|.|   .|||||||||||||.|||.||||.|||||..|||||..|||||||..||||  .||||  |.
Sbjct    8  ATTACCTTTATAATCAGATACCCTATTTTAGTCTTATGAAGATTTTAATGTCTGCCTCCCCAA--CTATGCATA  79

Query  218  GTATATCACGGTTTCATCACACAACCCCAGACA-------------GTAAAACACACAGTGGTGAAAAATACAC  278
            |||||||||.|||||||||.|..||.|||| ||             ||.||||.||.||||||||.|||||||.
Sbjct   80  GTATATCACAGTTTCATCAAAGGACACCAG-CAATGTGCAGTTGTCGTCAAACTCAGAGTGGTGAGAAATACAG  152

Query  279  CGATCCTTTCAAACTCGGTTGGAGAGACTTGAAAGGTCTGTATGAGGACATTAGAAAGGAACTGCTTATATCAA  352
            .||||||||.|||||.||.||||||||||||||||||||||||||.||||||||||||||.||||..||.||.|
Sbjct  153  TGATCCTTTTAAACTTGGCTGGAGAGACTTGAAAGGTCTGTATGAAGACATTAGAAAGGAGCTGCACATCTCCA  226

Query  353  CATCAGAACTTAAGGAAATGTCTGAGTACTACTTTGATGGGAAAGGGAAAGCCTTTCGACCAATTATTGTGGCG  426
            |...||||||.|||||.|||||.||.||||||||.|||||.|||||.|||||||||.||||.||||||||||.|
Sbjct  227  CCAGAGAACTAAAGGACATGTCCGAATACTACTTCGATGGCAAAGGAAAAGCCTTTAGACCGATTATTGTGGTG  300

Query  427  CTAATGGCCCGAGCATGCAATATTCATCATAACAACTCCCGACATGTGCAAGCCAGCCAGCGCGCCATAGCCTT  500
            ||||||||||||||.||.||||||||||||||.||..|||||.|..|||||||||||||||||.||||||||||
Sbjct  301  CTAATGGCCCGAGCGTGTAATATTCATCATAATAATGCCCGAGAGATGCAAGCCAGCCAGCGCTCCATAGCCTT  374

Query  501  AATTGCAGAAATGATCCACACTGCTAGTCTGGTTCACGATGACGTTATTGACGATGCAAGTTCTCGAAGAGGAA  574
            |.||||||||||||||||||||||||.|||||||||.||||||||||||||.||||||||||||||||||||||
Sbjct  375  AGTTGCAGAAATGATCCACACTGCTACTCTGGTTCATGATGACGTTATTGATGATGCAAGTTCTCGAAGAGGAA  448

Query  575  AACACACAGTTAATAAGATCTGGGGTGAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCATCT  648
            ||||.|||||||||||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct  449  AACATACAGTTAATAAAATCTGGGGTGAGAAAAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCGTCT  522

Query  649  ATAGCTCTGGCACGAATTGGAAATACAACTGTTATATCTATTTTAACCCAAGTTATTGAAGATTTGGTGCGTGG  722
            .|||||||||||||.||||||||.|||.|||||.|||||||.|||.||||||||||||||||||||||||||||
Sbjct  523  GTAGCTCTGGCACGGATTGGAAACACAGCTGTTGTATCTATGTTAGCCCAAGTTATTGAAGATTTGGTGCGTGG  596

Query  723  TGAATTTCTTCAGCTCGGGTCAAAAGAAAATGAGAATGAAAGATTTGCACACTACCTTGAGAAGACATTCAAGA  796
            |||||||||||||||.||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||
Sbjct  597  TGAATTTCTTCAGCTAGGGTCAAAAGAAAATGAGAATGAAAGGTTTGCCCACTACCTTGAGAAGACCTTCAAGA  670

Query  797  AGACCGCCAGCCTGATAGCCAACAGTTGTAAAGCAGT-------------------------------------  833
            ||||.||||||||||||||||||||||||||||||||                                     
Sbjct  671  AGACAGCCAGCCTGATAGCCAACAGTTGTAAAGCAGTCTCTGTCCTGGGTTGCCCTGACCCAGTGGTGCATGAG  744

Query  834  --------------------------------------------------------------------------  833
                                                                                      
Sbjct  745  ATAGCCTATCAGTATGGGAAAAATGTTGGAATAGCTTTTCAGCTCATAGATGATGTATTGGATTTCACCTCATG  818

Query  834  --------------------------------------------------------------------------  833
                                                                                      
Sbjct  819  TTCTGACCAGATGGGCAAGCCAACATCTGCAGACCTGAAGCTAGGCATAGCCACTGGCCCTGTCTTGTTTGCTT  892

Query  834  ------ATTTCCCAGAAATGAATGCTATGATCATGCGACGGTTCAGTTTGCCTGGAGATGTAGACAGAGCTCGA  901
                  |.|||||||||||||||||||||||.|||.||||||||||||||||.||||||||.||||||||.|||
Sbjct  893  GCCAGCAGTTCCCAGAAATGAATGCTATGATAATGAGACGGTTCAGTTTGCCAGGAGATGTGGACAGAGCACGA  966

Query  902  CAGTATGTACTACAGAG---------------------------------------------------------  918
            |||||||||.|||||||                                                         
Sbjct  967  CAGTATGTATTACAGAGTGATGGCGTGCAGCAAACAACCTACCTCGCCCAGCAGTACTGCCACAAAGCTGTGAG  1040

Query  919  --------------------------------------------------------------------------  918
                                                                                      
Sbjct 1041  AGAGATCAGGAAGCTTAGACCATCTACAGAAAGGGACGCCCTCATTCAGCTTTCAGAAAGTGTGCTCACCAGAG  1114

Query  919  -----  918
                 
Sbjct 1115  ATAAA  1119