Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11752
- Subject:
- XM_017319134.1
- Aligned Length:
- 1263
- Identities:
- 685
- Gaps:
- 489
Alignment
Query 1 ATGGCCTCGCGCTGGTGGCGGTGGCGGCGCGGCTGCTCCTGGAAGCCGGCGGCGCGGAGCCCCGGGCCCGGCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCCCGGCCGTGCGGTACCGTTGGGGCCGAGCGCCGCTGCCGAAGTCCGCGCGCAGGTTCATAGGCGGAAGGGAC 148
|.|..||
Sbjct 1 -------------------------------------------------------------------ATGACAC 7
Query 149 TTGACTTGT---CTCAGATACCCTATATTAATCTTGTGAAGCATTTAACATCTGCCTGTCCAAATGTATG--TC 217
.|.||.|.| .|||||||||||||.|||.||||.|||||..|||||..|||||||..|||| .|||| |.
Sbjct 8 ATTACCTTTATAATCAGATACCCTATTTTAGTCTTATGAAGATTTTAATGTCTGCCTCCCCAA--CTATGCATA 79
Query 218 GTATATCACGGTTTCATCACACAACCCCAGACA-------------GTAAAACACACAGTGGTGAAAAATACAC 278
|||||||||.|||||||||.|..||.|||| || ||.||||.||.||||||||.|||||||.
Sbjct 80 GTATATCACAGTTTCATCAAAGGACACCAG-CAATGTGCAGTTGTCGTCAAACTCAGAGTGGTGAGAAATACAG 152
Query 279 CGATCCTTTCAAACTCGGTTGGAGAGACTTGAAAGGTCTGTATGAGGACATTAGAAAGGAACTGCTTATATCAA 352
.||||||||.|||||.||.||||||||||||||||||||||||||.||||||||||||||.||||..||.||.|
Sbjct 153 TGATCCTTTTAAACTTGGCTGGAGAGACTTGAAAGGTCTGTATGAAGACATTAGAAAGGAGCTGCACATCTCCA 226
Query 353 CATCAGAACTTAAGGAAATGTCTGAGTACTACTTTGATGGGAAAGGGAAAGCCTTTCGACCAATTATTGTGGCG 426
|...||||||.|||||.|||||.||.||||||||.|||||.|||||.|||||||||.||||.||||||||||.|
Sbjct 227 CCAGAGAACTAAAGGACATGTCCGAATACTACTTCGATGGCAAAGGAAAAGCCTTTAGACCGATTATTGTGGTG 300
Query 427 CTAATGGCCCGAGCATGCAATATTCATCATAACAACTCCCGACATGTGCAAGCCAGCCAGCGCGCCATAGCCTT 500
||||||||||||||.||.||||||||||||||.||..|||||.|..|||||||||||||||||.||||||||||
Sbjct 301 CTAATGGCCCGAGCGTGTAATATTCATCATAATAATGCCCGAGAGATGCAAGCCAGCCAGCGCTCCATAGCCTT 374
Query 501 AATTGCAGAAATGATCCACACTGCTAGTCTGGTTCACGATGACGTTATTGACGATGCAAGTTCTCGAAGAGGAA 574
|.||||||||||||||||||||||||.|||||||||.||||||||||||||.||||||||||||||||||||||
Sbjct 375 AGTTGCAGAAATGATCCACACTGCTACTCTGGTTCATGATGACGTTATTGATGATGCAAGTTCTCGAAGAGGAA 448
Query 575 AACACACAGTTAATAAGATCTGGGGTGAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCATCT 648
||||.|||||||||||.|||||||||||.||.||||||||||||||||||||||||||||||||||||||.|||
Sbjct 449 AACATACAGTTAATAAAATCTGGGGTGAGAAAAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTGCAGCGTCT 522
Query 649 ATAGCTCTGGCACGAATTGGAAATACAACTGTTATATCTATTTTAACCCAAGTTATTGAAGATTTGGTGCGTGG 722
.|||||||||||||.||||||||.|||.|||||.|||||||.|||.||||||||||||||||||||||||||||
Sbjct 523 GTAGCTCTGGCACGGATTGGAAACACAGCTGTTGTATCTATGTTAGCCCAAGTTATTGAAGATTTGGTGCGTGG 596
Query 723 TGAATTTCTTCAGCTCGGGTCAAAAGAAAATGAGAATGAAAGATTTGCACACTACCTTGAGAAGACATTCAAGA 796
|||||||||||||||.||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||
Sbjct 597 TGAATTTCTTCAGCTAGGGTCAAAAGAAAATGAGAATGAAAGGTTTGCCCACTACCTTGAGAAGACCTTCAAGA 670
Query 797 AGACCGCCAGCCTGATAGCCAACAGTTGTAAAGCAGT------------------------------------- 833
||||.||||||||||||||||||||||||||||||||
Sbjct 671 AGACAGCCAGCCTGATAGCCAACAGTTGTAAAGCAGTCTCTGTCCTGGGTTGCCCTGACCCAGTGGTGCATGAG 744
Query 834 -------------------------------------------------------------------------- 833
Sbjct 745 ATAGCCTATCAGTATGGGAAAAATGTTGGAATAGCTTTTCAGCTCATAGATGATGTATTGGATTTCACCTCATG 818
Query 834 -------------------------------------------------------------------------- 833
Sbjct 819 TTCTGACCAGATGGGCAAGCCAACATCTGCAGACCTGAAGCTAGGCATAGCCACTGGCCCTGTCTTGTTTGCTT 892
Query 834 ------ATTTCCCAGAAATGAATGCTATGATCATGCGACGGTTCAGTTTGCCTGGAGATGTAGACAGAGCTCGA 901
|.|||||||||||||||||||||||.|||.||||||||||||||||.||||||||.||||||||.|||
Sbjct 893 GCCAGCAGTTCCCAGAAATGAATGCTATGATAATGAGACGGTTCAGTTTGCCAGGAGATGTGGACAGAGCACGA 966
Query 902 CAGTATGTACTACAGAG--------------------------------------------------------- 918
|||||||||.|||||||
Sbjct 967 CAGTATGTATTACAGAGTGATGGCGTGCAGCAAACAACCTACCTCGCCCAGCAGTACTGCCACAAAGCTGTGAG 1040
Query 919 -------------------------------------------------------------------------- 918
Sbjct 1041 AGAGATCAGGAAGCTTAGACCATCTACAGAAAGGGACGCCCTCATTCAGCTTTCAGAAAGTGTGCTCACCAGAG 1114
Query 919 ----- 918
Sbjct 1115 ATAAA 1119