Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11825
• Subject: NM_001083125.1
• Aligned Length: 1196
• Identities: 938
• Gaps: 172

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTACTGGAAGCATGAGAGCGCCGCCCCGGCGCTGCCCGAGGGCTGCCGGTTGCCGGCGGAGGGCGGCCCCAC  74

Query    1  -------------ATGGCCCAGCCAGGGTCCGGCTGCAAAGCGACCACCCGCTGTCTTGAAGGGACCGCGCCGC  61
                         ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||
Sbjct   75  CACCGACCAGGTGATGGCCCAGCCAGGGTCCGGCTGCAAAGCGACCACCCGCTGTCTCGAAGGGACCGCTCCGC  148

Query   62  CCGCCATGGCTCAGTCTGACGCCGAGGCCCTGGCAGGAGCTCTGGACAAGGACGAGGGTCAG-GCCTCCCCATG  134
            |.||||||||||||||.|||||.||||||.|||||||.|||||||||||||||||.||| || |||||||||||
Sbjct  149  CTGCCATGGCTCAGTCAGACGCAGAGGCCTTGGCAGGCGCTCTGGACAAGGACGAAGGT-AGAGCCTCCCCATG  221

Query  135  TACGCCCAGCACGCCATCTGTCTGCTCACCGCCCTCTGCCGCCTCCTCCGTGCCGTCTGCAGGCAAGAACATCT  208
            ||||||||||||.||.|||||||||||.|||||||||||.|||||.||||||||||||||.||||||||.||||
Sbjct  222  TACGCCCAGCACACCGTCTGTCTGCTCGCCGCCCTCTGCTGCCTCTTCCGTGCCGTCTGCCGGCAAGAATATCT  295

Query  209  GCTCCAGCTGCGGCCTCGAGATCCTGGACCGATATCTGCTCAAGGTCAACAACCTCATCTGGCACGTGCGGTGC  282
            |||||||.|||||.||.||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  296  GCTCCAGTTGCGGTCTGGAGATCCTGGACCGGTATCTGCTCAAGGTCAACAACCTCATCTGGCACGTGCGGTGC  369

Query  283  CTCGAGTGCTCCGTGTGTCGCACGTCGCTGAGGCAGCAGAACAGCTGCTACATCAAGAACAAGGAGATCTTCTG  356
            |||||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||.|||
Sbjct  370  CTCGAGTGCTCCGTGTGTCGCACATCGCTGAGGCAGCAGAATAGCTGCTACATCAAGAACAAGGAGATCTACTG  443

Query  357  CAAGATGGACTACTTCAGCCGATTCGGGACCAAGTGTGCCCGGTGCGGCCGACAGATCTACGCCAGCGACTGGG  430
            ||||||||||||||||||||||||.||.||||||||.||||||||||||.||||.|||||.|||||.|||||||
Sbjct  444  CAAGATGGACTACTTCAGCCGATTTGGAACCAAGTGCGCCCGGTGCGGCAGACAAATCTATGCCAGTGACTGGG  517

Query  431  TGCGGAGAGCTCGCGGCAACGCCTACCACCTGGCCTGCTTCGCCTGCTTCTCGTGCAAGCGCCAGCTGTCCACT  504
            |||||.|.||.||||||||.||||||||||||||.||.|||||||||||.||.||||||||||||||.|||||.
Sbjct  518  TGCGGCGCGCACGCGGCAATGCCTACCACCTGGCATGTTTCGCCTGCTTTTCCTGCAAGCGCCAGCTATCCACC  591

Query  505  GGTGAGGAGTTCGGCCTGGTCGAGGAGAAGGTGCTCTGCCGCATCCACTACGACACCATGATTGAGAACCTCAA  578
            ||||||||.||||||||.||.||||||||||||||.|||||||||||.||||||||||||||.|||||||||||
Sbjct  592  GGTGAGGAATTCGGCCTCGTTGAGGAGAAGGTGCTTTGCCGCATCCATTACGACACCATGATCGAGAACCTCAA  665

Query  579  GAGGGCCGCCGAGAACGGGAACGGCCTCACGTTGGAGGGGGCAGTGCCCTCGGAACAGGACAGTCAACCCAAGC  652
            ||||||||||||||||||||||||.||||||.||||||||||||||||||||||||||||||||||.|||||||
Sbjct  666  GAGGGCCGCCGAGAACGGGAACGGTCTCACGCTGGAGGGGGCAGTGCCCTCGGAACAGGACAGTCAGCCCAAGC  739

Query  653  CGGCCAAGCGCGCGCGGACGTCCTTCACCGCGGAACAGCTGCAGGTTATGCAGGCGCAGTTCGCGCAGGACAAC  726
            |.|||||||||||||||||||||||||||||.||.||..|||||||||||||||||||||||||||||||||||
Sbjct  740  CAGCCAAGCGCGCGCGGACGTCCTTCACCGCAGAGCAATTGCAGGTTATGCAGGCGCAGTTCGCGCAGGACAAC  813

Query  727  AACCCCGACGCTCAGACGCTGCAGAAGCTGGCGGACATGACGGGCCTCAGCCGGAGAGTCATCCAGGTGTGGTT  800
            |||||.|||||.|||||||||||||||||.||||||||||||||||||||.||.||.|||||||||||||||||
Sbjct  814  AACCCGGACGCGCAGACGCTGCAGAAGCTAGCGGACATGACGGGCCTCAGTCGCAGGGTCATCCAGGTGTGGTT  887

Query  801  TCAAAACTGCCGGGCGCGTCATAAAAAGCACACGCCGCAACACCCAGTGCCGCCCTCGGGGGCGCCCCCGTCCC  874
            ||||||||||||.|||||||||||||||||.||.|||||.|||||||||||||||||.|||||.||||||.|||
Sbjct  888  TCAAAACTGCCGAGCGCGTCATAAAAAGCATACACCGCAGCACCCAGTGCCGCCCTCTGGGGCACCCCCGACCC  961

Query  875  GCCTTCCCTCCGCCCTGTCCGACGACATCCACTACACCCCGTTCAGCAGCCCCGAGCGGGCGCGCATGGTCACC  948
            ||||.||.||.||||||||||||||||||||||||.|.||||||||||||||.|||.|||||||||||||||||
Sbjct  962  GCCTCCCTTCTGCCCTGTCCGACGACATCCACTACTCTCCGTTCAGCAGCCCAGAGAGGGCGCGCATGGTCACC  1035

Query  949  CTGCACGGCTACATTGAGAGTCA----GGTACAGTGCGGGCAGGT-GCACTGCCGGC---TGCCTTACACC---  1011
            .||||||||||||||||||||||    ..|.||||.|       | .|.||||||||   |||   |||.|   
Sbjct 1036  TTGCACGGCTACATTGAGAGTCATCCTTTTTCAGTAC-------TAACGCTGCCGGCGCTTGC---ACATCTGT  1099

Query 1012  ------GCACCCCCC--GTCCACCTCAAAGCCGATATGGATGGGCCGCTCTCCAACCGGGGTGAGAAGGTCATC  1077
                  |||||.|.|  .|.|.|||||                |||||                          
Sbjct 1100  CCATGGGCACCACACAGCTGCCCCTCA----------------GCCGC--------------------------  1131

Query 1078  CTTTTTCAGTAC  1089
                        
Sbjct 1132  ------------  1131