Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11825
- Subject:
- XR_374064.3
- Aligned Length:
- 2085
- Identities:
- 1006
- Gaps:
- 997
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTCATGAAGCAGGGATATTTTTGCAGGAGTTTGAGGGGTGTGTCGAAGTCTAGGACCTGAAGGATTGGTGTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGGTGACCATTTGCGACACAAATATACCAGGCTCAGCACTACATCAACAGAACGTGGCTTCATGTGGAATCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCCTTGTAGATGGGCTGACCACGGATTCCTCTCGCACCTATTAACGTTGTGTGAGGGCGGCAGTGGGTGCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAGGGAGGGGCGGCAGAAGGAGCTGTGAGGATATGTGCCCCGCCAGTGTCTTTGTATGTTAGCATGTTCCAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTCTCCCTGTAGCGCCTAGTTTCAGTGTGTCTCTCTGTGTGTGTATGTCTCTGAGTCTCTGCCTCCTTTGGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTCTCGCTCTTCTTAGCGGGGAGGGGATTGGTCACGCATGACTCATCTTGAACGGAGCGGGGCTCCAGCGGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCGGTCGTCGCCGCAGCTGGAAGGGGAGGAGGACAACGAGGAGGGAGAACAGGAGGAGGAAGAGGAGGAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAAGAGGAGGAGGAGGCGGCAGCCGCAGAAGCAGCTGCAGGGACCTCTCCAAGTTTGTCGGGACCTTCTTCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGCAGTGGTGCTGGCAGCCAGGGAGGCCAGGACTGCGCTCAGGCCGGGGGCGGGGAGCTGGGGCTGGGCCCGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCGGCGGGGCCGGAGCCTCGGTTCTCCAGCTCTCCCAGCAGCCTCTGCCCCCAGGACGCCCGAGGCCCCACTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCGCCTCTCTTCGCACTGCGCGCCCACCGAGCCCTCCCGCTCCCGGGCCCATGTACTGGAAGCATGAGAGCGC 814
Query 1 ----------------------------------------------------------------ATGGCCCAGC 10
||||||||||
Sbjct 815 CGCCCCGGCGCTGCCCGAGGGCTGCCGGTTGCCGGCGGAGGGCGGCCCCACCACCGACCAGGTGATGGCCCAGC 888
Query 11 CAGGGTCCGGCTGCAAAGCGACCACCCGCTGTCTTGAAGGGACCGCGCCGCCCGCCATGGCTCAGTCTGACGCC 84
||||||||||||||||||||||||||||||||||.|||||||||||.|||||.||||||||||||||.|||||.
Sbjct 889 CAGGGTCCGGCTGCAAAGCGACCACCCGCTGTCTCGAAGGGACCGCTCCGCCTGCCATGGCTCAGTCAGACGCA 962
Query 85 GAGGCCCTGGCAGGAGCTCTGGACAAGGACGAGGGTCAG-GCCTCCCCATGTACGCCCAGCACGCCATCTGTCT 157
||||||.|||||||.|||||||||||||||||.||| || |||||||||||||||||||||||.||.|||||||
Sbjct 963 GAGGCCTTGGCAGGCGCTCTGGACAAGGACGAAGGT-AGAGCCTCCCCATGTACGCCCAGCACACCGTCTGTCT 1035
Query 158 GCTCACCGCCCTCTGCCGCCTCCTCCGTGCCGTCTGCAGGCAAGAACATCTGCTCCAGCTGCGGCCTCGAGATC 231
||||.|||||||||||.|||||.||||||||||||||.||||||||.|||||||||||.|||||.||.||||||
Sbjct 1036 GCTCGCCGCCCTCTGCTGCCTCTTCCGTGCCGTCTGCCGGCAAGAATATCTGCTCCAGTTGCGGTCTGGAGATC 1109
Query 232 CTGGACCGATATCTGCTCAAGGTCAACAACCTCATCTGGCACGTGCGGTGCCTCGAGTGCTCCGTGTGTCGCAC 305
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 CTGGACCGGTATCTGCTCAAGGTCAACAACCTCATCTGGCACGTGCGGTGCCTCGAGTGCTCCGTGTGTCGCAC 1183
Query 306 GTCGCTGAGGCAGCAGAACAGCTGCTACATCAAGAACAAGGAGATCTTCTGCAAGATGGACTACTTCAGCCGAT 379
.|||||||||||||||||.||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1184 ATCGCTGAGGCAGCAGAATAGCTGCTACATCAAGAACAAGGAGATCTACTGCAAGATGGACTACTTCAGCCGAT 1257
Query 380 TCGGGACCAAGTGTGCCCGGTGCGGCCGACAGATCTACGCCAGCGACTGGGTGCGGAGAGCTCGCGGCAACGCC 453
|.||.||||||||.||||||||||||.||||.|||||.|||||.||||||||||||.|.||.||||||||.|||
Sbjct 1258 TTGGAACCAAGTGCGCCCGGTGCGGCAGACAAATCTATGCCAGTGACTGGGTGCGGCGCGCACGCGGCAATGCC 1331
Query 454 TACCACCTGGCCTGCTTCGCCTGCTTCTCGTGCAAGCGCCAGCTGTCCACTGGTGAGGAGTTCGGCCTGGTCGA 527
|||||||||||.||.|||||||||||.||.||||||||||||||.|||||.||||||||.||||||||.||.||
Sbjct 1332 TACCACCTGGCATGTTTCGCCTGCTTTTCCTGCAAGCGCCAGCTATCCACCGGTGAGGAATTCGGCCTCGTTGA 1405
Query 528 GGAGAAGGTGCTCTGCCGCATCCACTACGACACCATGATTGAGAACCTCAAGAGGGCCGCCGAGAAC------- 594
||||||||||||.|||||||||||.||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1406 GGAGAAGGTGCTTTGCCGCATCCATTACGACACCATGATCGAGAACCTCAAGAGGGCCGCCGAGAACGGCTGCC 1479
Query 595 -----------------------------------------------GGGAACGGCCTCACGTTGGAGGGGGCA 621
||||||||.||||||.|||||||||||
Sbjct 1480 ACTAGAAGAGATGGGGACGCGTGGTCAGCCGCTTCTGTCGCCCCCCAGGGAACGGTCTCACGCTGGAGGGGGCA 1553
Query 622 GTGCCCTCGGAACAGGACAGTCAACCCAAGCCGGCCAAGCGCGCGCGGACGTCCTTCACCGCGGAACAGCTGCA 695
|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.||.||..||||
Sbjct 1554 GTGCCCTCGGAACAGGACAGTCAGCCCAAGCCAGCCAAGCGCGCGCGGACGTCCTTCACCGCAGAGCAATTGCA 1627
Query 696 GGTTATGCAGGCGCAGTTCGCGCAGGACAACAACCCCGACGCTCAGACGCTGCAGAAGCTGGCGGACATGACGG 769
||||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||
Sbjct 1628 GGTTATGCAGGCGCAGTTCGCGCAGGACAACAACCCGGACGCGCAGACGCTGCAGAAGCTAGCGGACATGACGG 1701
Query 770 GCCTCAGCCGGAGAGTCATCCAGGTGTGGTTTCAAAACTGCCGGGCGCGTCATAAAAAGCACACGCCGCAACAC 843
|||||||.||.||.|||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||.|||
Sbjct 1702 GCCTCAGTCGCAGGGTCATCCAGGTGTGGTTTCAAAACTGCCGAGCGCGTCATAAAAAGCATACACCGCAGCAC 1775
Query 844 CCAGTGCCGCCCTCGGGGGCGCCCCCGTCCCGCCTTCCCTCCGCCCTGTCCGACGACATCCACTACACCCCGTT 917
||||||||||||||.|||||.||||||.|||||||.||.||.||||||||||||||||||||||||.|.|||||
Sbjct 1776 CCAGTGCCGCCCTCTGGGGCACCCCCGACCCGCCTCCCTTCTGCCCTGTCCGACGACATCCACTACTCTCCGTT 1849
Query 918 CAGCAGCCCCGAGCGGGCGCGCATGGTCACCCTGCACGGCTACATTGAGAGTCAGGTACAGTGCGGGCAGGTGC 991
|||||||||.|||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1850 CAGCAGCCCAGAGAGGGCGCGCATGGTCACCTTGCACGGCTACATTGAGAGTCAGGTACAGTGCGGGCAGGTGC 1923
Query 992 ACTGCCGGCTGCCTTACACCGCACCCCCCGTCCACCTCAAAGCCGATATGGATGGGCCGCTCTCCAACCGGGGT 1065
|||||||.||||||||||||||.|||||.||||||||||||||.|||.||||.||.||||||||||.|||||||
Sbjct 1924 ACTGCCGACTGCCTTACACCGCGCCCCCTGTCCACCTCAAAGCTGATTTGGACGGCCCGCTCTCCAGCCGGGGT 1997
Query 1066 GAGAAGGTCATCCTTTTTCAGTAC-------------------------------------------------- 1089
||||||||||||||||||||||||
Sbjct 1998 GAGAAGGTCATCCTTTTTCAGTACTAACGCTGCCGGCGCTTGCACATCTGTCCATGGGCACCACACAGCTGCCC 2071
Query 1090 ------------- 1089
Sbjct 2072 CTCAGCCGCTGAG 2084
