Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11838
- Subject:
- NR_146934.1
- Aligned Length:
- 2384
- Identities:
- 565
- Gaps:
- 1806
Alignment
Query 1 ------------------------------AT-------------GGAGCATGC---CTTTACCCCGT-TGGAG 27
|| |.|||.||| || ||.|| ||..|
Sbjct 1 AAGGCTCCTCAGCCGAGCGCCGAGCGGTCGATCGCCGTAGCTCCCGCAGCCTGCGATCT----CCAGTCTGTGG 70
Query 28 CCCCTGCTTTCCACTG-GGAATTTGAAGTACTGCCTTGTAATTCTTAATCAGCCTTTGGACAACTATTTTCGTC 100
|.|||.|...|||.|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 71 CTCCTACCAGCCATTGTGGAATTTGAAGTACTGCCTTGTAATTCTTAATCAGCCTTTGGACAACTATTTTCGTC 144
Query 101 ATCTTTGGAACAAAGCTCTTTTAAGAGCCTGTGCCGATGGAGGTGCCAACCGCTTATATGATATCACCGAAGGA 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 ATCTTTGGAACAAAGCTCTTTTAAGAGCCTGTGCCGATGGAGGTGCCAACCGCTTATATGATATCACCGAAGGA 218
Query 175 GAGAGAGAAAGCTTTTTGCCTGAATTCATCAATGGAGACTTTGATTCTATTAGGCCTGAAGTCAGAGAATACTA 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 219 GAGAGAGAAAGCTTTTTGCCTGAATTCATCAATGGAGACTTTGATTCTATTAGGCCTGAAGTCAGAGAATACTA 292
Query 249 TGCTACTAAGGGATGTGAGCTCATTTCAACTCCTGATCAAGACCACACTGACTTTACTAAGTGCCTTAAAATGC 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 TGCTACTAAGGGATGTGAGCTCATTTCAACTCCTGATCAAGACCACACTGACTTTACTAAGTGCCTTAAAATGC 366
Query 323 TCCAAAAGAAGATAGAAGAAAAAGACTTAAAGGTTGATGTGATCGTGACACTGGGAGGCCTTGCTGGGCGTTTT 396
||||||||||||||||||||||||||||||||
Sbjct 367 TCCAAAAGAAGATAGAAGAAAAAGACTTAAAG------------------------------------------ 398
Query 397 GACCAGATTATGGCATCTGTGAATACCTTGTTCCAAGCGACTCACATCACTCCTTTTCCAATTATAATAATCCA 470
Sbjct 399 -------------------------------------------------------------------------- 398
Query 471 AGAGGAATCGCTGATCTACCTGCTCCAACCAGGAAAGCACAGGTTGCATGTAGACACTGGAATGGAGGGTGATT 544
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 -------------------------------GGAAAGCACAGGTTGCATGTAGACACTGGAATGGAGGGTGATT 441
Query 545 GGTGTGGCCTTATTCCTGTTGGACAGCCTTGTAGTCAGGTTACAACCACAGGCCTCAAGTGGAACCTCACAAAT 618
|||||||||||||||||||||||||||||||||..|||||||||||||||||||||||||||||||||||||||
Sbjct 442 GGTGTGGCCTTATTCCTGTTGGACAGCCTTGTATGCAGGTTACAACCACAGGCCTCAAGTGGAACCTCACAAAT 515
Query 619 GATGTGCTTGCTTTTGGAACATTGGTCAGTACTTCCAATACCTACGACGGGTCTGGTGTTGTGACTGTGGAAAC 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 GATGTGCTTGCTTTTGGAACATTGGTCAGTACTTCCAATACCTACGACGGGTCTGGTGTTGTGACTGTGGAAAC 589
Query 693 TGACCACCCACTCCTCTGGACCATGGCCATCAAAAGC------------------------------------- 729
|||||||||||||||||||||||||||||||||||||
Sbjct 590 TGACCACCCACTCCTCTGGACCATGGCCATCAAAAGCTAACCTGTTGACTGGCATCCATAAGTGTGCCTCTGCC 663
Query 730 -------------------------------------------------------------------------- 729
Sbjct 664 TTATCTCATTTCTCAACAGTTCATTGCTCAACAAGAACGATTCACCTGGGTTTGCAAGAATCTAAACCTCTCTA 737
Query 730 -------------------------------------------------------------------------- 729
Sbjct 738 GGGGAAGCCCACTGGGTTTAAAGATGTTAGTGTTTAGATAATACAGGTAACATTATAAATGACAGATCTCAATT 811
Query 730 -------------------------------------------------------------------------- 729
Sbjct 812 TTATAGTAGTGGGAAAGATACATGCTAAGAAAGCAAATAAGCTCTATTATATTCGGTTGGAACCTAATGGGAAT 885
Query 730 -------------------------------------------------------------------------- 729
Sbjct 886 CATTCCACTATACAATTCAGTACTGATTATTCTTCTTACATTATTAATCATTCCATTTATCCTAGAAAATTGTT 959
Query 730 -------------------------------------------------------------------------- 729
Sbjct 960 TTTAATTTGAATCAGAGAAAACTGTTGAGGTTCCTCTTGGAGTCTAGAACATCCTTAAATGTCTAACAACAAGG 1033
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1034 GCTACCTCTGAGTACCTTTTAGTATTAGTTTTCTGTATATGATATATATTATCTTATACTGAAAAAAAATTCCT 1107
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1108 TTCAGATTGGGGTGTTAGAAGTGCACCAGGTCACTCTGACCTTATTACTGTCTTTGGTATTGTCTTAAATAAAT 1181
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1182 CAAGAATCATTGACCTAATTGTTAAATTTAAAAATAGGTAGTTAGCAATAGGTGGAAAGAGAAATGATGTGAAA 1255
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1256 GATAAATGATGATTCGTGGAGCCCTACTCACACATTAACCCCCAAATTCAAAAGTAAGAATGCAAAAGTCTAGA 1329
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1330 GGGGGTAACAGTCTGCATCATCATCACAACCTAAATGGAGAAAGCTGTGCAGAGGAAACTTAAGCATAAAAATT 1403
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1404 GAATTCGTTTCTGACATACCTTAGACTGAAAAACTGTTGGTTCATCCAGAAGTGTATTCATATTACCAGAAAAT 1477
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1478 GAGTTTGTCTATGGGGATACATGAACTTCATATACTAAGGAGCCTAACTCCAAAGCCTGCGTTCTCATCCCAGT 1551
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1552 CTGATATTCACCTAAGTTTCCGGACCCTTTTCCTTAGCTGTAAAATGGAAGCGGTTGGACTGATGGTGTCTGAG 1625
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1626 GTTCTTTCCCACACTGAAATTCTAAATATTGACACTTAGCAGTCATAGGGCTGATAATACACACAGTTACTGAC 1699
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1700 TTAGCCTAAACAACCTGGTGCATCGAAATGTATTCACCTTTCTTTTGTAAAGAGACCATCTTCTATCTTCTTTC 1773
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1774 CACCTTTCTCTGTTTTATGAAACCAACTGTTGACATACAAACCATGATTGAAGGAGAACCTGTCCAACATGTTT 1847
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1848 TATGTACACAAATCCCTATGTTGCTATAAGAAAAGTGAAAGTAACTGTTTTCTTCTTGGTGCTATGACAGTGTG 1921
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1922 AGACTCAGGTTGTCTGTAGAGAATGAAAGGAGCAGTGGCCCGCGTGATTGTGGCATTTAAGGAGCAGTGGCCCA 1995
Query 730 -------------------------------------------------------------------------- 729
Sbjct 1996 TGTGACTGTGGCATTTTCGGCACTTTTCATTACTTTCTGCTTGACCGGAAGTTGAGGCTTAGCTATGTTTCCAT 2069
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2070 CTTCAGTTTCTGAAGACTAGTTATATATTCCTTACTAGAAATATATTCATAATATATAAAAGAAATATATCTGT 2143
Query 730 -------------------------------------------------------------------------- 729
Sbjct 2144 GATTTTAAAATTTTGCTACCAAAGAATGCATGTTCTGTGTGCCCTGAAAATGTTACCAGTGTTAATAAATGGAT 2217
Query 730 ---------------- 729
Sbjct 2218 ACTTATCAAAAAAGAA 2233
