Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11862
- Subject:
- NM_001172121.1
- Aligned Length:
- 1405
- Identities:
- 666
- Gaps:
- 668
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGGAGGGCGACTTCTCATTCGGAGCAATGCTAATGGAGTCACTCAGTCCAACTCCACAGTGAGAGCCTA 74
Query 1 -------------------------ATGTACC------------CCCAGT------------------------ 13
|||..|| ||||||
Sbjct 75 TCAAAGCAGCAAGTCACGAGTGACCATGAGCCCTGGTTTCAGCTCCCAGTGGAGCAACAGCCAACCTGCCTGGA 148
Query 14 ACACTTACT---------------------ACTATC---CTCAT------TAT-----CTCCA-----AACCAA 47
||||.|||| ||||.| ||||| ||| ||.|| .|||..
Sbjct 149 ACACATACTCCTTCCCAAGAGCGAGCTTACACTACCAGTCTCATGCCAGCTATACATACTGCACTGGCCACCCC 222
Query 48 GCAGTCCTATGCACCAGCTCCCCACCCCATGGCTCCTCCCAGCCCCAGCACAAACAGCAGCAGCAACAACAGCA 121
| .||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 G-TGTCCTATGCACCAGCTCCCCACCCCATGGCTCCTCCCAGCCCCAGCACAAACAGCAGCAG----------- 284
Query 122 GCAACAACAGCAGCGGGGAACAGTTGAGTAAAACCAACCTGTACATTCGAGGCCTCCCACCAGGCACCACTGAC 195
|||||||||||||||||||||||||||.||.|||||.|||||.|||||.||.||||||||||||||||||
Sbjct 285 ----CAACAGCAGCGGGGAACAGTTGAGTAAGACAAACCTATACATCCGAGGACTTCCACCAGGCACCACTGAC 354
Query 196 CAGGACCTAATCAAGCTGTGCCAACCGTATGGAAAAATTGTATCTACAAAGGCAATTCTTGACAAAAACACAAA 269
||||||||.||||||||.||.|||||||||||||||||.|||||.||||||||||||||||||||.||.||.||
Sbjct 355 CAGGACCTCATCAAGCTATGTCAACCGTATGGAAAAATCGTATCCACAAAGGCAATTCTTGACAAGAATACGAA 428
Query 270 TCAGTGCAAAGGTTATGGTTTTGTAGATTTTGACAGTCCTGCAGCCGCACAGAAAGCGGTAGCATCTCTCAAGG 343
|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||.||.||..|.||||
Sbjct 429 TCAGTGCAAAGGTTATGGTTTTGTAGATTTTGATAGTCCTGCAGCCGCACAGAAAGCAGTGGCGTCCTTGAAGG 502
Query 344 CAAATGGCGTGCAGGCACAGATGGCTAAGCAACAAGAGCAAGACCCAACAAACCTATACATCTCAAATCTCCCC 417
|||||||||||||.|||||||||||.||||||||||||||||||||.||.||.||||||||||||||.||.|||
Sbjct 503 CAAATGGCGTGCAAGCACAGATGGCCAAGCAACAAGAGCAAGACCCTACGAATCTATACATCTCAAACCTTCCC 576
Query 418 ATTTCTATGGATGAGCAGGAGCTTGAGAATATGCTGAAACCCTTTGGACATGTCATTTCCACAAGAATACTAAG 491
||.||.|||||||||||||||||.|||||.|||||.||.|||||||||||.||.||.|||||.|||||.||.||
Sbjct 577 ATCTCCATGGATGAGCAGGAGCTGGAGAACATGCTAAAGCCCTTTGGACACGTGATATCCACCAGAATCCTGAG 650
Query 492 AGACGCTAATGGAGTCAGCAGAGGTGTTGGCTTTGCCAGAATGGAGTCTACTGAAAAATGTGAAGTGGTAATTC 565
.||.|||||.|||||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||.||||
Sbjct 651 GGATGCTAACGGAGTCAGCAGGGGCGTTGGCTTTGCCAGAATGGAGTCTACGGAAAAATGTGAAGTGGTGATTC 724
Query 566 AACATTTTAATGGAAAATATCTGAAAACACCACCAGGCATCCCAGCCCCCAGTGAGCCTTTGCTGTGCAAATTC 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.
Sbjct 725 AACATTTTAATGGAAAATATCTGAAAACACCACCAGGCATCCCAGCCCCCAGTGAGCCTTTGCTGTGCAAGTTT 798
Query 640 GCTGATGGAGGACAAAAGAAGCGACAGAATCAAAGCAAATATACCCAGAATGGGAGGCCTTGGCCCAGGGAAGG 713
|||||.||||||||.||||||.|||||..|||.|||||..|.||||||||.||||||||.||||||||.|||||
Sbjct 799 GCTGACGGAGGACAGAAGAAGAGACAGGGTCAGAGCAAGCACACCCAGAACGGGAGGCCATGGCCCAGAGAAGG 872
Query 714 AGAGGCTGGCATGGCTTTGACCTATGACCCCAC--CTGCC------AA-------------------------- 753
||||||||||||||||.|||||||||||||||| ||||| ||
Sbjct 873 AGAGGCTGGCATGGCTCTGACCTATGACCCCACAGCTGCCCTACAGAACGGATTTTATTCTTCACCGTACAGTC 946
Query 754 -------------------------------------------------------------------------- 753
Sbjct 947 TCGCAACCAACCGCATGATCCCACAGACATCTATCACGCCCTTCATTGCCGCTTCCCCTGTCTCCACATACCAG 1020
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1021 GGTGCTGTGATCACACCCGCCGTGGACCACCCCATGTCAATGCAGCCAACTAACATCGTGGGTCCCCTGACGCA 1094
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1095 GCAGATGAACCATCTTTCCCTGGGGACAGCAGGAACGATTCAATCCCAAGACAGAATTATGGTACTTCACCAGC 1168
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1169 TGTTATGTCAGTATATGACTGCTGCTCCTATGCAAGGGACCTACATTCCCCAGTACACGCCTGTGCCTCCGACA 1242
Query 754 -------------------------------------------------------------------------- 753
Sbjct 1243 GCTGTTTCTATTGAAGGTGTTGTTGCTGATACCTCTCCCCAGACGGTGGCCCCCTCATCCCAGGACAGCAGTGG 1316
Query 754 ------------------------------------------------------------------------- 753
Sbjct 1317 TCAGCAGCAACAGTTAGCAGTGGACACACCCAGTGAACACGCACCGGCATACTCCTTCCAACAGTCCAAACCA 1389