Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11862
Subject:
XM_017313246.1
Aligned Length:
2430
Identities:
668
Gaps:
1692

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGCCCGGCCCCGGAGAGCAGCGAGTTCGTGCACAGAACATGGGTACAATGTGAGAATGAGAGCTGCCTGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATGGAGGCTGCTGTCCCCTGCAGCTGCAGCCGCAGTGAACCCCAGCGAGCCCTGGTACTGCTTCATGAACACTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACCCCAGCTACAGCAGCTGCTCCGTCTCCGAGGAGGATTTCCCTGAAGAATCTCAGTTCCTTGAAAACGGGTAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAGTTTGTCTATTCACAGCTACCTCTCGGAAGCCTGGTTTTGGTAAAATTACGGAATTGGCCAAGTTGGCCAGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AATACTTTGTCCTGATCCTTTCAAAGGGAAATATGTAACCTATGACCAGGATGGAAATGTTGAAAAGTATTACG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TAGAATTTCTGGGTGACCCCCACTCGACAGCGTGGATGAGTGCAGCGTTTGTTGGACATTTTAGTCTCACGTTA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAGGCAGCAGACTGTACGAAGAAGAAGAGGTGGTATAGAAGTGCCCTCGAGGAAGCATACCAACTCTACAGGTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTCCGCAGAGCAAAGACTAGAAGTGTGCTGCCTGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAGCTGCTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGGTGACCAAGAAAGGGATGCAAGTTTCCAAAATTAATACTGAAAAGAAAAGGCCCAGAGTTAGAAAGAGGAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGGGATGCTGCTTTAAAGTGCTCTGTTGAAATTTTTTGTTCTGATGAAGCCCTATCAAAGGAAAACATGGATGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CACATGGATTCATTACACTGATGACTTCATGCTCCCTGGACCTTGTGAGCCAAAAGCAGCAACTGTTAGCATCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTGTTTCAGAGGGTGAGACAAAAACTCCTCAGGGATTTCAGAGCTTTCTGAAAGCCCGTGGATACATTGCTATC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGAAAAGTGAATGGGAAGATGGAGATGGATGTGGAGGGAGTTTCTCCGCGCCCGGAGCCCATCCCCCGCTCCCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGGGGCTGGCGGAGCCTGCCAGGCGCCGCCACAACCGCCCCAGCCCCAGCCGCAGCCCCAGCAGCAGCTGGCTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGATGAAGTGCCCGGCGAGAGTGCGGGTGCTGAGGACAGCGACGATCCGGAGGCGAGACCCAATGGCGAGAGG  1110

Query    1  ------------------------------------------------------------ATGTACC-------  7
                                                                        |||..||       
Sbjct 1111  GGGGAGAGCAAGTCCAACTCCACAGTGAGAGCCTATCAAAGCAGCAAGTCACGAGTGACCATGAGCCCTGGTTT  1184

Query    8  -----CCCAGT------------------------ACACTTACT---------------------ACTATC---  28
                 ||||||                        ||||.||||                     ||||.|   
Sbjct 1185  CAGCTCCCAGTGGAGCAACAGCCAACCTGCCTGGAACACATACTCCTTCCCAAGAGCGAGCTTACACTACCAGT  1258

Query   29  CTCAT------TAT-----CT-------CCAAACCAAGCAGTCCTATGCACCAGCTCCCCACCCCATGGCTCCT  84
            |||||      |||     ||       |||..||..|||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTCATGCCAGCTATACATACTGCACTGGCCACCCCGTGCAGTCCTATGCACCAGCTCCCCACCCCATGGCTCCT  1332

Query   85  CCCAGCCCCAGCACAAACAGCAGCAGCAACAACAGCAGCAACAACAGCAGCGGGGAACAGTTGAGTAAAACCAA  158
            ||||||||||||||||||||||||||               |||||||||||||||||||||||||||.||.||
Sbjct 1333  CCCAGCCCCAGCACAAACAGCAGCAG---------------CAACAGCAGCGGGGAACAGTTGAGTAAGACAAA  1391

Query  159  CCTGTACATTCGAGGCCTCCCACCAGGCACCACTGACCAGGACCTAATCAAGCTGTGCCAACCGTATGGAAAAA  232
            |||.|||||.|||||.||.||||||||||||||||||||||||||.||||||||.||.||||||||||||||||
Sbjct 1392  CCTATACATCCGAGGACTTCCACCAGGCACCACTGACCAGGACCTCATCAAGCTATGTCAACCGTATGGAAAAA  1465

Query  233  TTGTATCTACAAAGGCAATTCTTGACAAAAACACAAATCAGTGCAAAGGTTATGGTTTTGTAGATTTTGACAGT  306
            |.|||||.||||||||||||||||||||.||.||.|||||||||||||||||||||||||||||||||||.|||
Sbjct 1466  TCGTATCCACAAAGGCAATTCTTGACAAGAATACGAATCAGTGCAAAGGTTATGGTTTTGTAGATTTTGATAGT  1539

Query  307  CCTGCAGCCGCACAGAAAGCGGTAGCATCTCTCAAGGCAAATGGCGTGCAGGCACAGATGGCTAAGCAACAAGA  380
            ||||||||||||||||||||.||.||.||..|.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct 1540  CCTGCAGCCGCACAGAAAGCAGTGGCGTCCTTGAAGGCAAATGGCGTGCAAGCACAGATGGCCAAGCAACAAGA  1613

Query  381  GCAAGACCCAACAAACCTATACATCTCAAATCTCCCCATTTCTATGGATGAGCAGGAGCTTGAGAATATGCTGA  454
            |||||||||.||.||.||||||||||||||.||.|||||.||.|||||||||||||||||.|||||.|||||.|
Sbjct 1614  GCAAGACCCTACGAATCTATACATCTCAAACCTTCCCATCTCCATGGATGAGCAGGAGCTGGAGAACATGCTAA  1687

Query  455  AACCCTTTGGACATGTCATTTCCACAAGAATACTAAGAGACGCTAATGGAGTCAGCAGAGGTGTTGGCTTTGCC  528
            |.|||||||||||.||.||.|||||.|||||.||.||.||.|||||.|||||||||||.||.||||||||||||
Sbjct 1688  AGCCCTTTGGACACGTGATATCCACCAGAATCCTGAGGGATGCTAACGGAGTCAGCAGGGGCGTTGGCTTTGCC  1761

Query  529  AGAATGGAGTCTACTGAAAAATGTGAAGTGGTAATTCAACATTTTAATGGAAAATATCTGAAAACACCACCAGG  602
            ||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1762  AGAATGGAGTCTACGGAAAAATGTGAAGTGGTGATTCAACATTTTAATGGAAAATATCTGAAAACACCACCAGG  1835

Query  603  CATCCCAGCCCCCAGTGAGCCTTTGCTGTGCAAATTCGCTGATGGAGGACAAAAGAAGCGACAGAATCAAAGCA  676
            |||||||||||||||||||||||||||||||||.||.|||||.||||||||.||||||.|||||..|||.||||
Sbjct 1836  CATCCCAGCCCCCAGTGAGCCTTTGCTGTGCAAGTTTGCTGACGGAGGACAGAAGAAGAGACAGGGTCAGAGCA  1909

Query  677  AATATACCCAGAATGGGAGGCCTTGGCCCAGGGAAGGAGAGGCTGGCATGGCTTTGACCTATGACCCCAC--CT  748
            |..|.||||||||.||||||||.||||||||.|||||||||||||||||||||.||||||||||||||||  ||
Sbjct 1910  AGCACACCCAGAACGGGAGGCCATGGCCCAGAGAAGGAGAGGCTGGCATGGCTCTGACCTATGACCCCACAGCT  1983

Query  749  GCC------AA---------------------------------------------------------------  753
            |||      ||                                                               
Sbjct 1984  GCCCTACAGAACGGATTTTATTCTTCACCGTACAGTCTCGCAACCAACCGCATGATCCCACAGACATCTATCAC  2057

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2058  GCCCTTCATTGCCGCTTCCCCTGTCTCCACATACCAGGGTGCTGTGATCACACCCGCCGTGGACCACCCCATGT  2131

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2132  CAATGCAGCCAACTAACATCGTGGGTCCCCTGACGCAGCAGATGAACCATCTTTCCCTGGGGACAGCAGGAACG  2205

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2206  TATATGACTGCTGCTCCTATGCAAGGGACCTACATTCCCCAGTACACGCCTGTGCCTCCGACAGCTGTTTCTAT  2279

Query  754  --------------------------------------------------------------------------  753
                                                                                      
Sbjct 2280  TGAAGGTGTTGTTGCTGATACCTCTCCCCAGACGGTGGCCCCCTCATCCCAGGACAGCAGTGGTCAGCAGCAAC  2353

Query  754  --------------------------------------------------------------  753
                                                                          
Sbjct 2354  AGTTAGCAGTGGACACACCCAGTGAACACGCACCGGCATACTCCTTCCAACAGTCCAAACCA  2415

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