Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11896
- Subject:
- XM_006510216.3
- Aligned Length:
- 1860
- Identities:
- 1221
- Gaps:
- 522
Alignment
Query 1 ATGGGTGTGAAAACATTTACTCATAGCTCCTCTTCCCACAGCCAGGAAATGCTTGGAAAGCTAAATATGCTGCG 74
|||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||.|||||||||||.||
Sbjct 1 ATGGGTGTGAAAACATTTACTCACAGCTCCTCTTCCCACAGCCAGGAAATGCTGGGGAAACTAAATATGCTCCG 74
Query 75 AAATGATGGACATTTTTGTGATATCACTATTCGTGTCCAGGACAAAATCTTCCGGGCACATAAGGTGGTACTAG 148
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||.|||||||
Sbjct 75 AAATGATGGACATTTTTGTGATATCACTATTCGTGTCCAGGACAAAATCTTCCGGGCTCACAAGGTAGTACTAG 148
Query 149 CAGCTTGCAGTGATTTCTTTCGCACCAAACTTGTAGGCCAAGCCGAGGATGAGAACAAGAATGTGTTGGATCTG 222
||||||||||||||||||||||.|||||||||||.||||||.|.||.|||||||||||.|||||||||||||||
Sbjct 149 CAGCTTGCAGTGATTTCTTTCGAACCAAACTTGTTGGCCAAACAGAAGATGAGAACAAAAATGTGTTGGATCTG 222
Query 223 CATCATGTTACAGTGACTGGCTTTATACCTCTTTTAGAATATGCTTACACAGCCACTCTATCAATTAACACAGA 296
|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||.||
Sbjct 223 CATCATGTTACAGTGACTGGCTTTATACCTCTTTTAGAATACGCTTACACAGCCACTCTGTCAATTAACACGGA 296
Query 297 AAATATTATTGATGTTCTAGCAGCAGCCAGCTATATGCAAATGTTCAGTGTTGCCAGCACCTGCTCAGAGTTCA 370
|||||||||||||||||||||.|||||||||||||||||||||||.||||||||.||.||.|||||||||||||
Sbjct 297 AAATATTATTGATGTTCTAGCGGCAGCCAGCTATATGCAAATGTTTAGTGTTGCTAGTACATGCTCAGAGTTCA 370
Query 371 TGAAATCAAGCATTTTATGGAATACACCCAACAGCCAACCTGAAAAGGGTCTAGATGCTGGACAAGAAAATAAT 444
||||.|||||.|||||.|||||||||||.||.||||||||.||||||.||||||||||||||||||||||||..
Sbjct 371 TGAAGTCAAGTATTTTGTGGAATACACCTAATAGCCAACCAGAAAAGAGTCTAGATGCTGGACAAGAAAATAGC 444
Query 445 TCTAACTGCAATTTTACTTCTCGAGATGGGAGCATTTCTCCCGTGTCCTCAGAGTGCAGTGTGGTAGAAAGAAC 518
||.||||||||||||||||||||||||||.|||||||||||.|||||.|||||||||||||..||.||.||.||
Sbjct 445 TCCAACTGCAATTTTACTTCTCGAGATGGAAGCATTTCTCCAGTGTCTTCAGAGTGCAGTGCTGTGGAGAGGAC 518
Query 519 CATTCCTGTCTGCCGAGAATCCCGGAGAAAGCGCGAAAGCTACATTGTTATGTCTCCTGAAAGTCCTGTAAAGT 592
||||||||||||||||||.||||||||.||||||.||||||||||||||||||||||.||.|||||.||.||.|
Sbjct 519 CATTCCTGTCTGCCGAGAGTCCCGGAGGAAGCGCAAAAGCTACATTGTTATGTCTCCCGAGAGTCCCGTGAAAT 592
Query 593 GTGGCACACAAACAAGCTCACCCCAGGTATTGAATTCTTCAGCTTCCTACTCAGAAAATAGAAACCAACCAGTT 666
||.||||.||||||||.||.|||||||||.|||||||||||||||||||..||||||||||||..||.||||||
Sbjct 593 GTAGCACCCAAACAAGTTCCCCCCAGGTACTGAATTCTTCAGCTTCCTATGCAGAAAATAGAAGTCAGCCAGTT 666
Query 667 GACTCTTCCTTAGCTTTTCCTTGGACTTTTCCTTTTGGAATTGATCGAAGGATTCAGCCTGAGAAAGTTAAGCA 740
||||||||.||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||..|||||
Sbjct 667 GACTCTTCTTTAGCTTTTCCTTGGACTTTCCCTTTTGGAATAGATCGAAGGATTCAGCCTGAGAAAGCAAAGCA 740
Query 741 AGCAGAAAATACCCGGACTTTAGAATTACCTGGCCCATCTGAGACCGGTAGAAGAATGGCTGATTATGTGACTT 814
.||||||||||||||||||||||||||.|||||||||||.|||.|.|||||||||.|||||||.||||||||||
Sbjct 741 GGCAGAAAATACCCGGACTTTAGAATTGCCTGGCCCATCCGAGGCAGGTAGAAGAGTGGCTGACTATGTGACTT 814
Query 815 GTGAGAGCACAAAAACTACCTTGCCTTTAGGTACCGAAGAAGATGTCCGGGTCAAAGTAGAAAGATTAAGTGAT 888
||||||||||||||.|.|||||||||.|||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGAGAGCACAAAACCCACCTTGCCTCTAGGTACAGAAGAAGATGTCCGGGTCAAAGTAGAAAGATTAAGTGAT 888
Query 889 GAGGAGGTCCATGAGGAAGTGTCCCAGCCTGTCAGTGCATCTCAGAGTTCGCTGAGTGATCAGCAGACAGTTCC 962
||||||||||||||||||||||||||||||||.||||||||||||||.||.||||||||||||||||||||.||
Sbjct 889 GAGGAGGTCCATGAGGAAGTGTCCCAGCCTGTTAGTGCATCTCAGAGCTCACTGAGTGATCAGCAGACAGTGCC 962
Query 963 AGGAAGTGAACAAGTCCAAGAGGACCTTCTGATTAGTCCACAGTCTTCCTCTATAGGCTCAGTAGATGAAGGCG 1036
.||||||||||.|||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||.|
Sbjct 963 CGGAAGTGAACCAGTTCAAGAGGACCTTCTGATCAGTCCACAGTCTTCCTCTATAGGCTCAGTAGATGAAGGAG 1036
Query 1037 TTTCTGAGGGCTTGCCTACACTTCAAAGCACGTCTAGCACTAATGCTCCTCCGGATGATGATGATCGATTGGAA 1110
|..||||.||.||||||||||||||.|||||.||||||||.|||||||.|.|.|||||.|||||
Sbjct 1037 TCACTGAAGGATTGCCTACACTTCAGAGCACCTCTAGCACCAATGCTCATGCAGATGACGATGA---------- 1100
Query 1111 AATGTTCAGTATCCCTACCAACTCTACATTGCTCCTTCCACCAGCAGTACAGAGCGACCAAGTCCAAATGGTCC 1184
|||||||||||||||.|||||||||||||||||
Sbjct 1101 -----------------------------------------CAGCAGTACAGAGCGGCCAAGTCCAAATGGTCC 1133
Query 1185 CGACAGACCTTTTCAGTGTCCAACCTGCGGGGTGCGATTCACCCGTATTCAGAACCTAAAGCAGCACATGCTCA 1258
.||||||||.|||||||||||||||||.|||||.||.|||||||||||||||||.|||||.|||||||||||.|
Sbjct 1134 AGACAGACCGTTTCAGTGTCCAACCTGTGGGGTCCGCTTCACCCGTATTCAGAATCTAAAACAGCACATGCTTA 1207
Query 1259 TCCACTCAGGAATTAAACCATTTCAGTGTGACCGCTGTGGGAAAAAGTTCACCAGGGCTTACTCGCTAAAGATG 1332
||||||||||||||||||||||||||||||||.|||||||.||||||||.||||||||||||||||||||||||
Sbjct 1208 TCCACTCAGGAATTAAACCATTTCAGTGTGACTGCTGTGGAAAAAAGTTTACCAGGGCTTACTCGCTAAAGATG 1281
Query 1333 CATCGCCTAAAGCATGAAGGGCATCCCAGGAAA-------TCAGCTTCTAG--ATCTAGCTCTGCCAC--TAAC 1395
||||||||||||||.|||| |.||| ||.|.|.|.|| ||.||| |||||| |.||
Sbjct 1282 CATCGCCTAAAGCACGAAG---------GTAAACGCTGTTTCCGGTGCCAGATATGTAG---TGCCACTTTCAC 1343
Query 1396 TGCTGT-------------------------------------------------------------------- 1401
|.|..|
Sbjct 1344 TTCCTTCGGGGAGTATAAACACCACATGAGGGTTTCCCGGCACATTATCCGCAAGCCTCGGATTTACGAGTGCA 1417
Query 1402 -------------------------------------------------------------------------- 1401
Sbjct 1418 AAACATGTGGCGCCATGTTCACCAACTCTGGAAATTTAATCGTGCACCTGAGGAGTCTGAACCATGAAGCATCA 1491
Query 1402 -------------------------------------------------------------------------- 1401
Sbjct 1492 GAGCTAGCAAACTACTTCCAGAGCAGTGATTTCTTAGTACCGGACTACTTAAACCAGGAGCAAGAAGAGACCCT 1565
Query 1402 -------------------------------------------------------------------------- 1401
Sbjct 1566 TGTTCAGTATGATCTTGGAGAACATACTTTTGAAAGCAACTCTTCTGTTCAAATGCCTGTGATTTCACAGGTCT 1639
Query 1402 -------------------------------------------------------------------------- 1401
Sbjct 1640 CCTCAACCCAGAATTGTGAAAGCACTTTTCCCCTGGGCTCTCTTGGTGGGCTTACAGAGAAGGAGGAGGAACTG 1713
Query 1402 -------------------------------------------------------------------------- 1401
Sbjct 1714 CATGAGCAGCCAAAGACCAGTGCTCCTGCTGAGGCGCCCAGGGATGACCCCCCTAAGGCAGAGCTGCCTGCTAT 1787
Query 1402 ---------- 1401
Sbjct 1788 AACTATTGAG 1797
