Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_11917
• Subject: NM_001371931.1
• Aligned Length: 893
• Identities: 592
• Gaps: 256

Alignment

Query   1  ATGGGTCGGCCCCTGCTGCTGCCCCTACTGCCCCTGCTGCTGCCGCCAGCATTTCTGCAGCCTAGTGGCTCCAC  74
           ||||||||||||||||||||||||||.||||.||||||||.||||||||||||||||||||||.||||||||||
Sbjct   1  ATGGGTCGGCCCCTGCTGCTGCCCCTGCTGCTCCTGCTGCAGCCGCCAGCATTTCTGCAGCCTGGTGGCTCCAC  74

Query  75  AGGATCTGGTCCAAGCTACCTTTATGGGGTCACTCAACCAAAACACCTCTCAGCCTCCATGGGTGGCTCTGTGG  148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  75  AGGATCTGGTCCAAGCTACCTTTATGGGGTCACTCAACCAAAACACCTCTCAGCCTCCATGGGTGGCTCTGTGG  148

Query 149  AAATCCCCTTCTCCTTCTATTACCCCTGGGAGTTAGCCACAGCTCCCGACGTGAGAATATCCTGGAGACGGGGC  222
           |||||||||||||||||||||||||||||||||||||||.||.||||.||||||||||||||||||||||||||
Sbjct 149  AAATCCCCTTCTCCTTCTATTACCCCTGGGAGTTAGCCATAGTTCCCAACGTGAGAATATCCTGGAGACGGGGC  222

Query 223  CACTTCCACGGGCAGTCCTTCTACAGCACAAGGCCGCCTTCCATTCACAAGGATTATGTGAACCGGCTCTTTCT  296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223  CACTTCCACGGGCAGTCCTTCTACAGCACAAGGCCGCCTTCCATTCACAAGGATTATGTGAACCGGCTCTTTCT  296

Query 297  GAACTGGACAGAGGGTCAGAAGAGCGGCTTCCTCAGGATCTCCAACCTGCAGAAGCAGGACCAGTCTGTGTATT  370
           |||||||||||||||||||.||||||||||||||||||||||.|||||||.||||.||||||||||||||||||
Sbjct 297  GAACTGGACAGAGGGTCAGGAGAGCGGCTTCCTCAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATT  370

Query 371  TCTGCCGAGTTGAGCTGGACACACGGAGCTCAGGGAGGCAGCAGTGGCAGTCCATCGAGGGGACCAAACTCTCC  444
           ||||||||||.|||||||||||.|||||.||||||||||||||||.||||||||||.||||||||||||||.||
Sbjct 371  TCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACC  444

Query 445  ATCACCCAGG--GTCAGCAGC-----------GGA----CTAAAGC--CACAACCCC---AGC------CAGGG  490
           ||||||||||  |||| ||.|           |||    |   |||  |||||||.|   |||      |||||
Sbjct 445  ATCACCCAGGCTGTCA-CAACCACCACCACCTGGAGGCCC---AGCAGCACAACCACCATAGCCGGCCTCAGGG  514

Query 491  AACCCTTC--------CAAA----ACACAGA------------------GGA----GCCATATG----------  520
                 ||        ||||    ||.||||                  |||    |||||..|          
Sbjct 515  ------TCACAGAAAGCAAAGGGCACTCAGAATCATGGCACCTAAGTCTGGACACTGCCATCAGGGTTGCATTG  582

Query 521  ----------------AGAATATCA-----GGAAT-----------------------------GAAGGACA--  542
                           |.|.|.|||     |||.|                             ||||||.|  
Sbjct 583  GCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACTGCTGTGCCTCCTCCTCCTGTGGTGGAGGAGAAGGAAAGG  656

Query 543  ----------------------------AA------ATAC---AGATCCCAA------GCTAAATCCCAAGC--  571
                                       ||      ||||   ||||||  |      ||   |||.| |||  
Sbjct 657  CTTGAGCCACCGCACCCGGCCAGTTTGGAATCTGTTATACGGGAGATCC--ATGTGTGGC---ATCTC-AGCAG  724

Query 572  -----TCC------ACCT--------CAC----CC----------AGAGCAC----CTCCCAGCCACC-----G  603
                |||      |.||        |||    ||          ||||.||    || ||||.||.|     |
Sbjct 725  AGTTGTCCATTGGAAACTTGGATGTACACATTTCCAGTTCAAAAGAGAGGACAAGGCT-CCAGGCAGCAATGAG  797

Query 604  TCC--CCTCAAGAGCCCCCAGAACGAGACCCTGTA-CTCTGTCTTAAAGGC-CTAACCAATGGACAGCCCTCTC  673
           |.|  ||||||.|.||.||| |||..||  |.||| |         |.||| |.||.||.| |||..|      
Sbjct 798  TTCTACCTCAATATCCTCCA-AACCTGA--CAGTAGC---------AGGGCGCCAAGCAGT-GACTTC------  852

Query 674  AAGAC  678
                
Sbjct 853  -----  852