Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11917
- Subject:
- NR_036569.1
- Aligned Length:
- 3722
- Identities:
- 608
- Gaps:
- 3061
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCAGAGCACACCGGACTGCGTTTTTTCCGAACGCCAGCAGCAGGGTCAGAAGGGAGGTAGTCGCCCTCCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCCTGGCGTGGATTCCGAGCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTACCAGGTAAAGCCCTATCACGGGGTCGGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACATGCACGGCAGGAGCGGCGGCCCAGCACTCGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAACAAAACGACCACTGAAAACAATGCCGGTGGCAAAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAAAGAAAGGGTCCCAAGTGGTACATCGTCATAGCTGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCTGCGAAAGCTGCCAAAAGTGACATGCAGTGTGGCCATGAGGTCTGCCGGAAGTGACTTGTTGGTGTTATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCTGAGTTAAAATGTGAAGGGATTTTTTTTTTTCAGATTACTGAGAGTCTTCAGTTACTAGAGGCGGATTTCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGACTGAAGACCATGTTGCAGGCCCACAGCTGCCTACAGAACCGTCCCAAAATATGGCAAAGAAACCTATTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGCGATAGGGTCTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTGGACTCATCCTAAAGTGCTGGCCTCTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCCCTGTCTGTGCACACCTCACGGCAAGGGCCAGCCTGTTTCCTCCCGGTCACCTCCAAATCTTGCTGCTTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AATTCAACTCAGAGGCCTAGCCAGGGTTGAGTTCTCACCCACCTGTGCCGCCCTGCCTTGTTACCTGGAAGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCTTGGGGACTGAGCAGGCCCTCACTGTCACTTTAAGAAGGGAATCAGCCACTTTGTGCTCACCACCTCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAAGGTGTGAGAGGAGAGAAGGAAGTGGCTGTTTGGCTGCTGACAACATGAAGACTTCCTGCGATGAGAACAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGCACAGGTGCCGGCCCTGCAGCCCCCAGAACCCGGACTGGAGGGGGCCATGGGGCGCCGGACCCTGGCCCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCTGGGTGCTGCTGACCCTGCGTGTCACTGCAGGGACCCCGGAGGTGTGAGTACAAGTTCGGATGGAGGCCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGAGCTCTCGTCCTTCACCATCCGTTGTGGGTTCCTGGAGTCTGGCTCCATCTCCCTGGTGACTGCCCGCTGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAACCCAGAGCAGCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTGCGCCAACACCACCTTCTGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCAAGTTTGCGTCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGCCCAGCTCAGACCCAGGGCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCTGTCCCGCCGACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTGGGGGTCTCAGGAGTCCTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCTTTGACTGTGGCTACCTCCTTCATCTGCTGTGCCGACAGAAGCACCGCCCTGCCCCTAGGCTCCAGCCATCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACACCAGCTCCTAGGCACTGAGAGCACGAGCATGGGCACCCAGCCAGGCCTCCCAGGCTGCTCTCCACGTCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTATGCCACTATCAACACCAGCTGCTGCCCAGCTACTTTGGACACAGCTCACCCCCGACAGGGGGCCGTCCTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGGCATCACTCCCCACCCACACCGCACACTGGCCCCAGGGCCCTGCTGCCTGGGCCTCCACATCCATCCCTGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACATGGCAGCTTTGTCTCTGTTGAGAATGGACTCTACGCTTAGGCTGGGCAGAGGCCTCCCTGCACTGGTCCTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCCTCACTCTTTTCCCTGACCCTTGGGGCCCAGGGCCATGGAGGGACCCTTAGGAGTTCAATGAGAGAGACCAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGGCCACTGGGCTTTCCCCTTCCCAGGCCTCCTGGGTGCCACCCCCTTACGTTATTCTTGGGCCTCTAATAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTCCCACAGGTGCCTGGCCAGGCCCACCTGCTGCAGATGTGGTCTGTGTGTGTGCATGTGTGGGTGTGTGTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCACAGGTGTGAGTGTGTGAGCAACAGTACCCCATTCCAGTCGTTTCCTGCTGTGACTAAGTCAGCAACACAGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCCTCTGACATGGGCCTTGGCTGTGCTTCTTTGGGGGTGAAGAGATTGGGGAGGAAGTCTCCACCCCTGGGAGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAGAAGCCAGGCATAGCGCGCTGGCTAGGACTCCAGTACCGTGAAGGGAGGCAGTGAGAGCAGACATCTGTGCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCATTCCTGATCTCAAGGGGAAAGCAAGAACAAGGGAGGCTTCCTCAGGATCTCGAACCTGCGGAAGGAGGACC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGTCTGTGTACTTCTGCCAAGTCCAGCTGGACATACAGATCAGGGAGGCTGTCGTGGCAGTCCATCAAGGGGAC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCACCTCACCATCACCCAGGCCCTCAGGCAGCCCCTCCACAGGGCCCCTCTCCTGCCTGGACAGCTCTGCTGGT 2516
Query 1 -----------------------------ATGGGTCGGCCCCTGCTGCTGCCCCTACTGCCCCTGCTGCTGCCG 45
||||||||||||||||||||||||||.||||.||||||||.||||
Sbjct 2517 CTCCCCGTCCCCTGGAGAAGAACAAGGCCATGGGTCGGCCCCTGCTGCTGCCCCTGCTGCTCCTGCTGCAGCCG 2590
Query 46 CCAGCATTTCTGCAGCCTAGTGGCTCCACAGGATCTGGTCCAAGCTACCTTTATGGGGTCACTCAACCAAAACA 119
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CCAGCATTTCTGCAGCCTGGTGGCTCCACAGGATCTGGTCCAAGCTACCTTTATGGGGTCACTCAACCAAAACA 2664
Query 120 CCTCTCAGCCTCCATGGGTGGCTCTGTGGAAATCCCCTTCTCCTTCTATTACCCCTGGGAGTTAGCCACAGCTC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||
Sbjct 2665 CCTCTCAGCCTCCATGGGTGGCTCTGTGGAAATCCCCTTCTCCTTCTATTACCCCTGGGAGTTAGCCATAGTTC 2738
Query 194 CCGACGTGAGAATATCCTGGAGACGGGGCCACTTCCACGGGCAGTCCTTCTACAGCACAAGGCCGCCTTCCATT 267
||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CCAACGTGAGAATATCCTGGAGACGGGGCCACTTCCACGGGCAGTCCTTCTACAGCACAAGGCCGCCTTCCATT 2812
Query 268 CACAAGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGAAGAGCGGCTTCCTCAGGATCTCCAA 341
||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||.||
Sbjct 2813 CACAAGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGGAGAGCGGCTTCCTCAGGATCTCAAA 2886
Query 342 CCTGCAGAAGCAGGACCAGTCTGTGTATTTCTGCCGAGTTGAGCTGGACACACGGAGCTCAGGGAGGCAGCAGT 415
|||||.||||.||||||||||||||||||||||||||||.|||||||||||.|||||.||||||||||||||||
Sbjct 2887 CCTGCGGAAGGAGGACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAGGGAGGCAGCAGT 2960
Query 416 GGCAGTCCATCGAGGGGACCAAACTCTCCATCACCCAGG--GTCAGCAGC-----------GGA----CTAAAG 472
.||||||||||.||||||||||||||.|||||||||||| |||| ||.| ||| | ||
Sbjct 2961 TGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAGGCTGTCA-CAACCACCACCACCTGGAGGCCC---AG 3030
Query 473 C--CACAACCCC---AGC------CAGGGAACCCTTC--------CAAA----ACACAGA-------------- 509
| |||||||.| ||| ||||| || |||| ||.||||
Sbjct 3031 CAGCACAACCACCATAGCCGGCCTCAGGG------TCACAGAAAGCAAAGGGCACTCAGAATCATGGCACCTAA 3098
Query 510 ----GGA----GCCATATG--------------------------AGAATATCA-----GGAAT---------- 534
||| |||||..| |.|.|.||| |||.|
Sbjct 3099 GTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACTGCTGTGCCTC 3172
Query 535 -------------------GAAGGACAAAATA-CAGATC-CCAAGC--TAAATCCCAAGCTCCACCTCA----- 580
|||||| ||..|| |||..| |||||| |.|.|.|..| |||.|..|
Sbjct 3173 CTCCTCCTGTGGTGGAGGAGAAGGA-AAGGTAGCAGGGCGCCAAGCAGTGACTTCTGA---CCAACAGAGTGTG 3242
Query 581 ----------------------CCCAGAGCACCT---------CCC-------AG----CCAC---CGTCCCCT 609
|||.|||.||.| ||| || |||| |||.|||
Sbjct 3243 GGGAGAAGGGATGTGTATTAGCCCCGGAGGACGTGATGTGAGACCCGCTTGTGAGTCCTCCACACTCGTTCCC- 3315
Query 610 CA----------------AGAGCCCC-------------------------------CAGAACGA------GAC 630
|| |||||.|| |||||.|| |.|
Sbjct 3316 CATTGGCAAGATACATGGAGAGCACCCTGAGGACCTTTAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCTGGGTC 3389
Query 631 CCTGTA-CTCTGTC----------TTA-----AAG-GCCT--AACCAATGGA-CAGCC-CTCT-CAA-GAC--- 678
||||.| |.|.|.| ||| ||| |||| |.||| ||| ||.|| |.|| ||| ||.
Sbjct 3390 CCTGAATCACCGACTGGAGGAGAGTTACCTACAAGAGCCTTCATCCA--GGAGCATCCACACTGCAATGATATA 3461
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3462 GGAATGAGGTCTGAACTCCACTGAATTAAACCACTGGCATTTGGGGGCTGTTTATTATAGCAGTGCAAAGAGTT 3535
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3536 CCTTTATCCTCCCCAAGGATGGAAAAATACAATTTATTTTGCTTACCATACACCCCTTTTCTCCTCGTCCACAT 3609
Query 679 -------------------------------------------------------------------------- 678
Sbjct 3610 TTTCCAATCTGTATGGTGGCTGTCTTCTATGGCAGAAGGTTTTGGGGAATAAATAGCGTGAAATGCTGCTGACA 3683
Query 679 ---------------------- 678
Sbjct 3684 AAAAAAAAAAAAAAAAAAAAAA 3705
