Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_11984
Subject:
XM_017316613.1
Aligned Length:
1643
Identities:
1188
Gaps:
307

Alignment

Query    1  ATGGCTGACTCAGAAGCACTCCCCTCCCTTGCTGGGGACCCAGTGGCTGTGGAAGCCTTGCTCCGGGCCGTGTT  74
            ||||||||||||.||.|||||....||||.|.|||||||||.|||||||||||.||||||||||.||.||||||
Sbjct    1  ATGGCTGACTCAAAACCACTCAGGACCCTGGATGGGGACCCCGTGGCTGTGGAGGCCTTGCTCCAGGACGTGTT  74

Query   75  TGGGGTTGTTGTGGATGAGGCCATTCAGAAAGGAACCAGTGTCTCCCAGAAGGTCTGTGAGTGGAAGGAGCCTG  148
            ||||.|||||||.|||||||||||||.|||.||.|||||||.|||..||||||||||.||.|||||||||||||
Sbjct   75  TGGGATTGTTGTAGATGAGGCCATTCTGAAGGGGACCAGTGCCTCTGAGAAGGTCTGCGAATGGAAGGAGCCTG  148

Query  149  AGGAGCTGAAGCAGCTGCTGGATTTGGAGCTGCGGAGCCAGGGCGAGTCACAGAAGCAGATCCTGGAGCGGTGT  222
            |.||.||.||||||||||||||.||||||||||.|||||||||||||||.|.|.||||||||||||||||.||.
Sbjct  149  AAGAACTCAAGCAGCTGCTGGACTTGGAGCTGCAGAGCCAGGGCGAGTCCCGGGAGCAGATCCTGGAGCGCTGC  222

Query  223  CGGGCTGTGATTCGCTACAGTGTCAAGACTGGTCACCCTCGGTTCTTCAACCAGCTCTTCTCTGGGTTGGATCC  296
            |||.|||||||||.||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||
Sbjct  223  CGGACTGTGATTCACTACAGTGTCAAGACTGGTCACCCCCGGTTCTTCAACCAGCTCTTCTCAGGGTTAGATCC  296

Query  297  CCATGCTCTGGCCGGGCGCATTATCACTGAGAGCCTCAACACCAGCCAGTACACATATGAAATCGCCCCCGTGT  370
            ||||||||||||.||||||||.|||||.||||||||||||||.|||||||||||||||||.||.||||||||||
Sbjct  297  CCATGCTCTGGCTGGGCGCATCATCACGGAGAGCCTCAACACTAGCCAGTACACATATGAGATTGCCCCCGTGT  370

Query  371  TTGTGCTCATGGAAGAGGAGGTGCTGAGGAAACTGCGGGCCCTGGTGGGCTGGAGCTCTGGGGACGGAATCTTC  444
            |||||||||||||||||||||||||||.||||||.||.||||||||||||||||.|||||||||.||..|||||
Sbjct  371  TTGTGCTCATGGAAGAGGAGGTGCTGAAGAAACTCCGTGCCCTGGTGGGCTGGAACTCTGGGGATGGGGTCTTC  444

Query  445  TGCCCTGGTGGCTCCATCTCCAACATGTATGCTGTAAATCTGGCCCGCTATCAGCGCTACCCGGATTGCAAGCA  518
            ||.||||||||||||||||||||||||||.||..|.||.||||||||||.||||||||||||.||.||||||||
Sbjct  445  TGTCCTGGTGGCTCCATCTCCAACATGTACGCCATGAACCTGGCCCGCTTTCAGCGCTACCCAGACTGCAAGCA  518

Query  519  GAGGGGCCTCCGCACACTGCCGCCCCTGGCCCTATTCACATCGAAGGAGTGTCACTACTCCATCCAGAAGGGAG  592
            ||||||||||||..|.|||||||||.||||.||.|||||.||.|||||||||||||||||||||...|||||||
Sbjct  519  GAGGGGCCTCCGGGCCCTGCCGCCCTTGGCTCTCTTCACTTCAAAGGAGTGTCACTACTCCATCACCAAGGGAG  592

Query  593  CTGCGTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAAAATGGTCCCCGAG  666
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||..|||.||||.|||
Sbjct  593  CTGCTTTTCTGGGACTTGGCACCGACAGTGTCCGAGTGGTCAAGGCTGATGAGAGAGGGAGGATGATCCCTGAG  666

Query  667  GATCTGGAGAGGCAGATTGGTATGGCCGAGGCTGAGGGTGCTGTGCCGTTCCTGGTCAGTGCCACCTCTGGCAC  740
            ||.||||||||||||||...|.||||.|||||||||||..|||||||.||.||||||||||||||||||||.||
Sbjct  667  GACCTGGAGAGGCAGATCATTCTGGCAGAGGCTGAGGGCTCTGTGCCATTTCTGGTCAGTGCCACCTCTGGTAC  740

Query  741  CACTGTGCTAGGGGCCTTTGACCCCCTGGAGGCAATTGCTGATGTGTGCCAGCGTCATGGGCTATGGCTGCATG  814
            |||.||||||||||||||||||||||||||.||||||||.|||||.||||||||.||.||.||.|||.|.||||
Sbjct  741  CACCGTGCTAGGGGCCTTTGACCCCCTGGATGCAATTGCCGATGTTTGCCAGCGACACGGACTGTGGTTCCATG  814

Query  815  TGGATGCTGCCTGGGGTGGGAGCGTCCTGCTGTCACAGACACACAGGCATCTCCTGGATGGGATCCAGAGGGCT  888
            ||||||||||||||||||||||||||||||||||.|.|||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGATGCTGCCTGGGGTGGGAGCGTCCTGCTGTCTCGGACACACAGGCATCTCCTGGATGGGATCCAGAGGGCT  888

Query  889  GACTCTGTGGCCTGGAATCCCCACAAGCTCCTCGCAGCAGGCCTGCAATGCTCTGCACTTCTTCTCCAGGATAC  962
            |||||||||||||||||.||.||||||||.|||||.|||||.|||||.|||||.||.||||||||||.|||.||
Sbjct  889  GACTCTGTGGCCTGGAACCCTCACAAGCTTCTCGCCGCAGGGCTGCAGTGCTCCGCTCTTCTTCTCCGGGACAC  962

Query  963  CTCGAACCTGCTCAAGCGCTGCCATGGGTCCCAGGCCAGCTACCTTTTCCAGCAGGACAAGTTCTACGATGTGG  1036
            |||||||||||||||||||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||
Sbjct  963  CTCGAACCTGCTCAAGCGCTGCCATGGATCCCAGGCCAGCTACCTCTTCCAGCAAGACAAGTTCTACGATGTGG  1036

Query 1037  CTCTGGACACGGGAGACAAGGTGGTGCAGTGTGGCCGCCGTGTGGACTGTCTGAAGCTGTGGCTCATGTGGAAG  1110
            ||||||||||.||||||||.||||||||||||||||||||.|||||||||||||||||.|||||||||||||||
Sbjct 1037  CTCTGGACACCGGAGACAAAGTGGTGCAGTGTGGCCGCCGCGTGGACTGTCTGAAGCTATGGCTCATGTGGAAG  1110

Query 1111  GCACAGGGCGATCAAGGGCTGGAGCGGCGCATCGACCAGGCCTTTGTCCTTGCCCGGTACCTGGTGGAGGAAAT  1184
            ||||||||.|..||.|||.|||||||||||||||||||||||||||..||..||||||||.||||||||||.||
Sbjct 1111  GCACAGGGTGGGCAGGGGTTGGAGCGGCGCATCGACCAGGCCTTTGCTCTCACCCGGTACTTGGTGGAGGAGAT  1184

Query 1185  GAAGAAGCGGGAAGGGTTTGAGCTAGTCATGG------------------------------------------  1216
            .||.|||||||||||.||||||.|.||.||||                                          
Sbjct 1185  TAAAAAGCGGGAAGGATTTGAGTTGGTAATGGAGGTAGGACTCCTGGCTCCTTTGAATGCCTCTCCCAGCCCCC  1258

Query 1217  --------------------------------------------------------------------------  1216
                                                                                      
Sbjct 1259  ACCTTGTTCCAGACATGAAGCCTCATAAAGGACCAGGAGCAAAGACAGGGAAACAACCCCTTCTTTCCTTCCTT  1332

Query 1217  ------------------------------------------------AGCCTGAGTTTGTCAATGTGTGTTTC  1242
                                                            ||||.|||||.|||||.|||||.|||
Sbjct 1333  CCTCCCTCCCTTCCTTCCCCAACTCATGCCTCCCTCATCCCTCCCCTCAGCCCGAGTTCGTCAACGTGTGCTTC  1406

Query 1243  TGGTTCGTACCCCCCAGCCTGCGAGGGAAGCAGGAGAGTCCAGATTACCACGAAAGGCTGTCAAAGGTGGCCCC  1316
            |||||.||.||.||||||||.||.||||||.|||||||||||||||||..|.||||||||||..||||||||||
Sbjct 1407  TGGTTTGTGCCTCCCAGCCTTCGGGGGAAGAAGGAGAGTCCAGATTACAGCCAAAGGCTGTCTCAGGTGGCCCC  1480

Query 1317  CGTGCTCAAGGAGCGCATGGTGAAGGAGGGCTCCATGATGATTGGCTACCAGCCCCACGGGACCCGGGGCAACT  1390
            .|||||||||||||||||||                                                      
Sbjct 1481  TGTGCTCAAGGAGCGCATGG------------------------------------------------------  1500

Query 1391  TCTTCCGTGTGGTTGTGGCCAACTCTGCACTGACCTGTGCTGATATGGACTTCCTCCTCAACGAGCTGGAGCGG  1464
                                                                                      
Sbjct 1501  --------------------------------------------------------------------------  1500

Query 1465  CTAGGCCAGGACCTG  1479
                           
Sbjct 1501  ---------------  1500

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