Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11985
- Subject:
- NM_001278683.1
- Aligned Length:
- 2511
- Identities:
- 1398
- Gaps:
- 1113
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACTGGGCGAAAAGCCAGCGGTGGCACACCTTGCACTCTGCGTAAAGGGGCGCCTATTATCACCTTGGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACTGGACAGAGCGCCTGGCGGCGGGTGATTCAGTTGGGTGCTCTGGGGCCAGGTGCCACCGGCCATTGTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCAGCTGTGTGCAAGCCAAAGAAGCATGAGGACACTGGAAGACTCCTCGGGGACAGTCCTGCACCGCCTCATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGAGCAGCTGCGCTACGGCAACCTGACTGAGACGCGCACGCTGCTAGCCATCCAGCAGCAGGCCCTGAGGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGGCTGGAACTGGGGGTACAGGGAGCCCCCAGGCCTCCCTGGAGATCCTGGCCCCAGAGGACAGTCAGGTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCAGCAGGCCACCAGGCAGGAGCCCCAGGGCCAGGAGCACCAGGGCGGTGAGAACCACCTGGCAGAGAACACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCTACCGGCTATGCCCACAGCCCAGCAAGGGAGAGGAGCTGCCCACCTATGAGGAGGCCAAAGCCCACTCGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTACTATGCGGCCCAGCAGGCAGGGACCCGGCCACATGCGGGGGACCGAGATCCCCGTGGGGCCCCGGGAGGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTCGGAGGCAGGACGAGGCCCTGCGGGAGCTGAGGCATGGGCACGTGCGCTCGTTGAGTGAACGGCTCCTTCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGTCCCTGGAGAGGAACGGCGCCCGGGCCCCCAGCCACATGAGCTCCTCCCACAGCTTCCCACAGCTGGCCCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAACCAGCAGGGCCCCCCACTGAGGGGCCCCCCTGCTGAGGGCCCAGAGTCCCGAGGACCCCCACCTCAGTACC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCATGTTGTACTAGCTCATGAGACCACCACTGCTGTCACTGACCCACGGTACCGTGCCCGCGGCAGCCCGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCCAGCATGCTGAAGTCAGGATCCTGCAGGCCCAGGTGCCTCCTGTGTTCCTCCAACAGCAGCAGCAGTACCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTACCTGCAGCAATCTCAGGAGCACCCCCCTCCCCCACATCCAGCTGCTCTCGGCCATGGCCCCCTGAGCTCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCAGTCCACCTGCTGTGGAGGGGCCAGTGAGTGCCCAGGCCTCCTCAGCCACCTCGGGCAGTGCCCACCTGGCC 1110
Query 1 ---ATGGAGGCCGTGCTGAGGGAGAATGCCAGGCTGCAGAGAGACAATGAGCGGCTGCAGAGGGAGCTGGAGAG 71
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGATGGAGGCCGTGCTGAGGGAGAATGCCAGGCTGCAGAGAGACAATGAGCGGCTGCAGAGGGAGCTGGAGAG 1184
Query 72 CTCTGCGGAGAAGGCTGGCCGCATTGAGAAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGCCCATGAGAGCC 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTCTGCGGAGAAGGCTGGCCGCATTGAGAAGCTGGAAAGCGAAATCCAGCGGCTCTCTGAGGCCCATGAGAGCC 1258
Query 146 TGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGGACAGTGAAATGAGGAGG 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGAGAAGACCATGCGGAACAAGATGGACAGTGAAATGAGGAGG 1332
Query 220 CTGCAAGACTTCAACCGGGATCTTAGAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCAAGCAAGACACAGGA 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CTGCAAGACTTCAACCGGGATCTTAGAGAGAGATTGGAATCTGCAAATCGCCGCCTGGCAAGCAAGACACAGGA 1406
Query 294 GGCCCAGGCCGGCAGTCAGGACATGGTGGCCAAGCTGCTTGCTCAGAGCTACGAACAGCAGCAGGAGCAAGAGA 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGCCCAGGCCGGCAGTCAGGACATGGTGGCCAAGCTGCTTGCTCAGAGCTACGAACAGCAGCAGGAGCAAGAGA 1480
Query 368 AGCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGCGGCGTGCCGAGCTGCTGGAGCAG 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCCATCGAGGACCAGCGGCGGCGTGCCGAGCTGCTGGAGCAG 1554
Query 442 GCTCTGGGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAGGAGCTGCGCAAGAAGCAGGCCTATGTGGAGAA 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCTCTGGGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAGGAGCTGCGCAAGAAGCAGGCCTATGTGGAGAA 1628
Query 516 AGTGGAGCGGCTGCAGCAGGCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAAGCGGGAGCAGCTGGAGCTGCGTC 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGTGGAGCGGCTGCAGCAGGCGCTCGGGCAGCTGCAGGCAGCCTGTGAGAAGCGGGAGCAGCTGGAGCTGCGTC 1702
Query 590 TGCGGACTCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCACAGCAGAGACAGGCAGGTGCCCCAGGTGGTAGC 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGCGGACTCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCACAGCAGAGACAGGCAGGTGCCCCAGGTGGTAGC 1776
Query 664 AGTGGCAGTGGTGGGTCTCCAGAGCTCAGCGCCCTGCGACTGTCAGAACAACTGCGAGAGAAGGAGGAGCAGAT 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AGTGGCAGTGGTGGGTCTCCAGAGCTCAGCGCCCTGCGACTGTCAGAACAACTGCGAGAGAAGGAGGAGCAGAT 1850
Query 738 CCTGGCGCTGGAGGCCGACATGACCAAGTGGGAGCAGAAGTATTTGGAGGAACGTGCCATGAGGCAGTTTGCCA 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CCTGGCGCTGGAGGCCGACATGACCAAGTGGGAGCAGAAGTATTTGGAGGAACGTGCCATGAGGCAGTTTGCCA 1924
Query 812 TGGATGCGGCTGCCACGGCTGCTGCTCAGCGTGACACCACTCTCATCCGACATTCCCCCCAGCCCTCACCCAGC 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TGGATGCGGCTGCCACGGCTGCTGCTCAGCGTGACACCACTCTCATCCGACATTCCCCCCAGCCCTCACCCAGC 1998
Query 886 AGCAGCTTCAATGAGGGTCTGCTCACTGGTGGCCACAGGCATCAGGAGATGGAAAGCAGGTTAAAGGTGCTCCA 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AGCAGCTTCAATGAGGGTCTGCTCACTGGTGGCCACAGGCATCAGGAGATGGAAAGCAGGTTAAAGGTGCTCCA 2072
Query 960 TGCCCAGATCCTGGAGAAGGATGCAGTGATCAAGGTCCTTCAGCAGCGCTCCAGGAGAGACCCTGGCAAGGCCA 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGCCCAGATCCTGGAGAAGGATGCAGTGATCAAGGTCCTTCAGCAGCGCTCCAGGAGAGACCCTGGCAAGGCCA 2146
Query 1034 TCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGG 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATCTGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGG 2220
Query 1108 CAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGACAGAGCACCCACAGA 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACGCCCCTGCTCGGCTGACTACAGACAGAGCACCCACAGA 2294
Query 1182 GGAGCCAGTGGTCACAGCTCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAGATGGGAGCACCCAGACTGAGG 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GGAGCCAGTGGTCACAGCTCCCCCTGCTGCCCATGCCAAACACGGGAGCAGAGATGGGAGCACCCAGACTGAGG 2368
Query 1256 GCCCCCCAGACAGCACCTCCACCTGCCTGCCACCGGAGCCTGACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGA 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GCCCCCCAGACAGCACCTCCACCTGCCTGCCACCGGAGCCTGACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGA 2442
Query 1330 GCAGCCTCTCTGGACTCTGTAGCTACATCCAGAGTCCAGGACTTGTCAGACATGGTGGAGATACTGATC 1398
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GCAGCCTCTCTGGACTCTGTAGCTACATCCAGAGTCCAGGACTTGTCAGACATGGTGGAGATACTGATC 2511
