Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_11985
- Subject:
- XM_006511772.2
- Aligned Length:
- 2401
- Identities:
- 1194
- Gaps:
- 1019
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGGTGCTCTGAGACCAGGTGCCTGCTGGCCATTGTCTAGGCAGGTGTGTGCAAGCCAGAGAAGCATGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACACTGGAAGACTCCTCAGGGACAGTCCTGCACCGTCTCATCCAAGAGCAGCTGCGCTACGGCAACCTGACAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGACTCGCACTCTGCTGGCTATCCAGCAGCAGGCCCTGCGGGGTGGGGCTGGAGCTGGGGGCACGGGGAGCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGCTTCCTTGGAGATCGGAGCACCCGAGGACAGTCAGGTGCTGCAGCAAGCCACCAGGCAGGAGCCCCAGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAGGAGCATCAGGGTGGAGAGACCCACCTGGCAGAGAACAGGCTGTACCGGCTGTGCCCACAGCCCAGCAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGAAGAGTTGCCCACCTATGAGGAGGCCAAAGCCCATTCGCAGTACTACGCAGCGCAGCAGGCAGGGTCCCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGCATGTTGGGGACCGGGATCCTAGAGGAGGGGTGTCCGGAGGCGGCCGGCGACAGGATGAAGCTCTTCGAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCTGAGGCATGGCCATGTGCGCTCCTTGAGTGAACGGCTTCTGCAACTGTCCCTGGAAAGAAACGGTGCTCGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCCCAGCCACATGAGCTCTTCCCACAGCTTCCCTCAGCTGGCCCGCAGCCAGCAGGGCCCCCAACCCCGAGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCCCAGCTGAGGGCCCAGAGCCCCGCGGGCCACCACCTCAGTACCCACACGCTGTAATGGCTCAGGAGACTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCTGTCACTGACCCAAGATACCGACCCCGAAGCAGCCCACACTTCCAGCATGCCGAAGTCAGGATCCTGCAGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCCAGGTACCACCGGTGTTCCTCCAGCAGCAGCAGTACCAGTACCTGCCACAGCCCCAGGAGCACTCTCCACCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTCCACCCGGCAGCTCTGGGCCATGGACCCCCAAGCTCCTTTGGTCCACCTGCAGTGGAGGGACCACCCAGTGC 962
Query 1 ----------------------------------ATGGAGGCCGTGCTGAGGGAGAATGCCAGGCTGCAGAGAG 40
||||||.|.||.||||||||||||||||||||||||||.|
Sbjct 963 CCAGGCCACCTTGGGCAGTGCCCACCTGGCCCAGATGGAGACTGTACTGAGGGAGAATGCCAGGCTGCAGAGGG 1036
Query 41 ACAATGAGCGGCTGCAGAGGGAGCTGGAGAGCTCTGCGGAGAAGGCTGGCCGCATTGAGAAGCTGGAAAGCGAA 114
||||||||||..|||||||.||||||||||||.||.|.|||||||||||||||||.||.||||||||||..|||
Sbjct 1037 ACAATGAGCGATTGCAGAGAGAGCTGGAGAGCACTTCAGAGAAGGCTGGCCGCATAGAAAAGCTGGAAAATGAA 1110
Query 115 ATCCAGCGGCTCTCTGAGGCCCATGAGAGCCTGACCAGAGCCTCCTCCAAGCGTGAGGCCCTGGAGAAGACCAT 188
|||||||||||||||||||||||.||||||||||..||..||||.|||||||||||||||||||||||||||||
Sbjct 1111 ATCCAGCGGCTCTCTGAGGCCCACGAGAGCCTGATGAGGACCTCTTCCAAGCGTGAGGCCCTGGAGAAGACCAT 1184
Query 189 GCGGAACAAGATGGACAGTGAAATGAGGAGGCTGCAAGACTTCAACCGGGATCTTAGAGAGAGATTGGAATCTG 262
|.||||||||||||||.||||.|||||..||.||||.|||||||||||.||.||||||||||||||||||||.|
Sbjct 1185 GAGGAACAAGATGGACGGTGAGATGAGACGGTTGCAGGACTTCAACCGAGACCTTAGAGAGAGATTGGAATCGG 1258
Query 263 CAAATCGCCGCCTGGCAAGCAAGACACAGGAGGCCCAGGCCGGCAGTCAGGACATGGTGGCCAAGCTGCTTGCT 336
||||.||||.|||||||||||||||.|||||.||||||||.||||||||||||||||||||.||.||||||||.
Sbjct 1259 CAAACCGCCACCTGGCAAGCAAGACCCAGGAAGCCCAGGCGGGCAGTCAGGACATGGTGGCGAAACTGCTTGCC 1332
Query 337 CAGAGCTACGAACAGCAGCAGGAGCAAGAGAAGCTGGAGCGAGAGATGGCACTGCTGCGCGGCGCCATCGAGGA 410
||||||||.||.|||||.|||||.||.||||||||||||||.|||||||||||||||||.||.|||||||||||
Sbjct 1333 CAGAGCTATGAGCAGCAACAGGAACAGGAGAAGCTGGAGCGGGAGATGGCACTGCTGCGTGGTGCCATCGAGGA 1406
Query 411 CCAGCGGCGGCGTGCCGAGCTGCTGGAGCAGGCTCTGGGCAATGCGCAGGGCCGGGCAGCTCGAGCCGAAGAGG 484
|||||||||.|.|||.||.||||||||||||||||||||||||||.||..||||.||.||.||.||.|||||||
Sbjct 1407 CCAGCGGCGACATGCTGAACTGCTGGAGCAGGCTCTGGGCAATGCACAAAGCCGTGCCGCCCGGGCTGAAGAGG 1480
Query 485 AGCTGCGCAAGAAGCAGGCCTATGTGGAGAAAGTGGAGCGGCTGCAGCAGGCGCTCGGGCAGCTGCAGGCAGCC 558
||||.|||||.||||||||||||||||||||.||||||||||||||||||||.||.||||||.|||||||.|||
Sbjct 1481 AGCTACGCAAAAAGCAGGCCTATGTGGAGAAGGTGGAGCGGCTGCAGCAGGCACTGGGGCAGTTGCAGGCTGCC 1554
Query 559 TGTGAGAAGCGGGAGCAGCTGGAGCTGCGTCTGCGGACTCGCCTGGAGCAGGAACTCAAGGCCCTGCGTGCACA 632
|||||.|||||.||||||.||||||||||||||||.||.||||||||||||||||||||.|||.||||||||||
Sbjct 1555 TGTGAAAAGCGAGAGCAGTTGGAGCTGCGTCTGCGCACGCGCCTGGAGCAGGAACTCAAAGCCTTGCGTGCACA 1628
Query 633 GCAGAGACAGGCAGGTGCCC---CAGGTGGTAGCAGTGGCAG---TGGTGGGTCTCCAGAGCTCAGCGCCCTGC 700
||||||.|||.||||..||| ||||||||.|| ||||| |||||||||..|.||||||||.|||||||
Sbjct 1629 GCAGAGGCAGACAGGCACCCTCGCAGGTGGTGGC---GGCAGCCATGGTGGGTCCGCCGAGCTCAGTGCCCTGC 1699
Query 701 GACTGTCAGAACAACTGCGAGAGAAGGAGGAGCAGATCCTGGCGCTGGAGGCCGACATGACCAAGTGGGAGCAG 774
|.|||||.|||||.|||||.|||||||||||.|||||||||||.||.|||||.|||||||||||||||||.|||
Sbjct 1700 GGCTGTCTGAACAGCTGCGGGAGAAGGAGGAACAGATCCTGGCTCTAGAGGCGGACATGACCAAGTGGGAACAG 1773
Query 775 AAGTATTTGGAGGAACGTGCCATGAGGCAGTTTGCCATGGATGCGGCTGCCACGGCTGCTGCTCAGCGTGACAC 848
|||||||||||.|||||.||.|||||||||||.||||||||.|||||||||||.||.|||||.|||||.||.||
Sbjct 1774 AAGTATTTGGAAGAACGGGCTATGAGGCAGTTCGCCATGGACGCGGCTGCCACTGCGGCTGCCCAGCGCGATAC 1847
Query 849 CACTCTCATCCGACATTCCCCCCAGCCCTCACCCAGCAGCAGCTTCAATGAGGGTCTGCTCACTGGTGGCCACA 922
||||||||||||.||.||||||||||||||.|||||||||||.|||||.|||||.|||||..|.||...|||||
Sbjct 1848 CACTCTCATCCGGCACTCCCCCCAGCCCTCGCCCAGCAGCAGTTTCAACGAGGGCCTGCTGCCAGGCAACCACA 1921
Query 923 GGCATCAGGAGATGGAAAGCAGGTTAAAGGTGCTCCATGCCCAGATCCTGGAGAAGGATGCAGTGATCAAGGTC 996
||||.|||||||||||.|||||.||.||||||||||||||.||||||||.|||||||||||.||||||||||||
Sbjct 1922 GGCACCAGGAGATGGAGAGCAGATTGAAGGTGCTCCATGCTCAGATCCTAGAGAAGGATGCGGTGATCAAGGTC 1995
Query 997 CTTCAGCAGCGCTCCAGGAGAGACCCTGGCAAGGCCATCCAGGGCTCCCTGCGGCCTGCCAAGTCGGTGCCATC 1070
|||||||||||||||||||.|||||||||||||||||.|||||||.||||.||||||||||||||||||||.||
Sbjct 1996 CTTCAGCAGCGCTCCAGGAAAGACCCTGGCAAGGCCACCCAGGGCACCCTACGGCCTGCCAAGTCGGTGCCGTC 2069
Query 1071 TGTTTTCGCGGCTGCGGCAGCAGGAACCCAGGGCTGGCAAGGGCTCTCTTCTAGTGAGCGACAAACAGCAGACG 1144
..|.||||||||| ||||..|||||.||||||||||||||||||...||.||||||||.|||||.|
Sbjct 2070 CATCTTCGCGGCT---GCAGTGGGAACTCAGGGCTGGCAAGGGCTCGTATCCAGTGAGCGGCAAACTG------ 2134
Query 1145 CCCCTGCTCGGCTGACTACAGACAGAGCACCCA-CAGAGGAGCCAGTGGTCACAGCTCCCCCTGCTGCCCATGC 1217
.|||.||||...|...||||.| |..|||| ||||||||||...||.|||||||||.|...|||||||..|
Sbjct 2135 ---ATGCACGGCCAGCGGGAGACCG-GGTCCCAGCAGAGGAGCCTCCGGCCACAGCTCCTCTCCCTGCCCACAC 2204
Query 1218 CAAACACGGGAGCAGAGATGGGAGCACCCAGACTGAGGGCCCCCCAGACAGCACCTCCACCTGCCTGCCACCGG 1291
||||||.||.||||||||.||||||||||||||.||.|||||..||||||.||||||..|||||.||.|..|.|
Sbjct 2205 CAAACATGGCAGCAGAGACGGGAGCACCCAGACGGATGGCCCTGCAGACAACACCTCTGCCTGCTTGGCCTCAG 2278
Query 1292 AGCCTGACAGCCTTCTGGGGTGCAGCAGTAGCCAGAGAGCAGCCTCTCTGGACTCTGTAGCTACATCCAGAGTC 1365
|.||.||..||||.||||||||||.||||||||||||..||.||||||||||||||.|||||.||.||||||||
Sbjct 2279 AACCCGATGGCCTCCTGGGGTGCAACAGTAGCCAGAGGACACCCTCTCTGGACTCTATAGCTGCAACCAGAGTC 2352
Query 1366 CAGGACTTGTCAGACATGGTGGAGATACTGATC 1398
|||||..|||||||||||||.||.|||||||||
Sbjct 2353 CAGGATCTGTCAGACATGGTAGAAATACTGATC 2385
