Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12029
- Subject:
- XM_024452086.1
- Aligned Length:
- 1865
- Identities:
- 789
- Gaps:
- 1003
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGCTGATATGGTCTGGCTGTGTCCCCACCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCTACAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCATGGGAGGGACTCAGTGGGAGCATCTCATCTTGTCTAAACGGGGAGAGTGGCCATCTGTCCGATACCCACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAAACCTGATCGTTCCCAGCCTCACAGAGCTGCTTTGTTCCAAGGTGACGCCTTCTGGGCCCCATCTGTCCTT 222
Query 1 ---------------------------------------------------------ATGGAGTCCAAGGTCTC 17
|||||||||||||||||
Sbjct 223 CCTCACAGCACCCTCAGCACCTTAAGCCACCACCCTCAGCCACAATTTGGCAGAAGGATGGAGTCCAAGGTCTC 296
Query 18 AGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGA 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGA 370
Query 92 AGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCA 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCA 444
Query 166 GAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGA 518
Query 240 GGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGC 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGC 592
Query 314 CTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCC 387
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCC 666
Query 388 CAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGC 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGC 740
Query 462 CATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCTACACAATCCAGGGACAGTATGCCA--- 532
|||||||||||||||||||||||||||||||||||||||||||.|| |||..||.|| .|||||
Sbjct 741 CATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGTCC--------CCACCGAAAG-GTGCCACCA 805
Query 533 -TCCCTCACCCGGATTTGACCAA------GCTCCAC--------------CAGTTGGCCATG---CAGCAAACC 582
||||| ||| |.|||| .|||||| |||.|||.||.| .|||..|.|
Sbjct 806 TTCCCT-ACC-------GCCCAAAGCCCGCCTCCACCCCTGTCATTTTTGCAGGTGGTCAGGTAAGAGCCGATC 871
Query 583 CCCT---TTCCTCC--------CCTCGG------ACAG-ACCAACC-CCGCTTTCCCC------GGAG------ 625
|.|| ..||||| ||||.| ||.| |.||.|| |||| |.||| ||||
Sbjct 872 CGCTCGCGGCCTCCACTGCCAACCTCAGCCTTTTACTGCAGCACCCGCCGC--TGCCCAAACTTGGAGTCGGAA 943
Query 626 ----AAAAGCTG--CCTTTACACTCC--TCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACG 691
.||.|||| |..||.|.|||| .|||..||| || |||||| .||||.||| |
Sbjct 944 GCATCAAGGCTGAACTGTTTCCCTCCCACCCGCTGAA-CT------------GGCCAG--CTCAGCTCT----G 998
Query 692 CCAGCCCACCGG-----------------CCAG---CACTCATGAGCTCACCATTCC-CA-----ATGATCTAA 739
||.|||||..|| |||| ||.| ||| ||||.|| || ||| |.|||
Sbjct 999 CCCGCCCAGAGGAAGTGGGCCTACACAATCCAGGGACAGT-ATG------CCATCCCTCACCCGGATG-TGTAA 1064
Query 740 T---AG-GCTGCA--------------------------------TAATT-----------GGACGCCAAGGGA 766
| || ||||.| ||||| |||.| |||..|
Sbjct 1065 TTCCAGTGCTGGAGGAAGAAGTTACCCTCAGATAAACGGTCGGTGTAATTCCAGTGCTGGGGGAAG--AAGTTA 1136
Query 767 CC-------AAA--ATCAATGAAATTCGACAGATGTCTGGAG------------CTCAGATCAAAATCGCC--- 816
|| ||| .||..||.||||| ||| || ||||.| ||||||| |||.||.|
Sbjct 1137 CCCTCAGATAAACGGTCGGTGTAATTC--CAG-TG-CTGGGGGAAGAAGTTACTCTCAGAT--AAACCGTCGGT 1204
Query 817 --AACGCCA-------CGGAAG--GGTCCTCAGAGCGTCAGATCACCATCACGG--GG----ACCCC------- 866
||..||| .||||| |.|.||| ||||||.| |||| || |..||
Sbjct 1205 GTAATTCCAGTGCTGGAGGAAGAAGTTACTC------TCAGATAA-----ACGGTCGGTGTAATTCCAGTGCTG 1267
Query 867 GGCCAACATCAGCCTTGCCCAGTATCTC--ATCAACG------------CCAG-GCTGACGTCCGAGGTCAC-- 923
||..||.| || ||.| |||| ||.|||| |||| ||||..|...||.||.||
Sbjct 1268 GGGGAAGA--AG--TTAC------TCTCAGATAAACGGTCGGTGTAATTCCAGTGCTGGGGGAAGAAGTTACCC 1331
Query 924 ---------CGGGATGGG--------CA-CGCTG---------------------------------------- 939
||| |.|| || .||||
Sbjct 1332 TCAGATAAACGG--TCGGTGTAATTCCAGTGCTGGGGGAAGAAGTTACCCTCAGATAAACCGTCGGTGTAATTC 1403
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1404 CAGTGCTGGGGGAAGAAGTTACCCTCAGATAAACCGTCGGTGTAATTCCAGTGCTGGGGGAAGAAGTTACTCTC 1477
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1478 AGATAAACCGTCGGTGTAATTCCAGTGCTGGAGGAAGAAGTTACTCTCAGATAAACGGTCGGTGTAATTCCAGT 1551
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1552 GCTGGGGGAAGAAGTTACCCTCAGATAAACCATTGGTGTAATTCCAGTGCTGAGGGAAGAAGTTACCCTCAGAT 1625
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1626 AAACCACTGGTGTAATTCCAGTGCTGGAGGAAGAAGTTACTCTCAGATAAACCGTCGGTGTAATTCCAGTGCTG 1699
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1700 GAGGAAGAAGATACTCTCAGATCATCCATCGGAGGGGAACCCTGGGCGGCTCTGGGCTGTGCGGCTCAGACCCC 1773
Query 940 --------------- 939
Sbjct 1774 TTAGGGGCCAAGAGA 1788
