Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12029
Subject:
XM_024452087.1
Aligned Length:
1865
Identities:
789
Gaps:
1003

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATGCTGATATGGTCTGGCTGTGTCCCCACCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCTACAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTCATGGGAGGGACTCAGTGGGAGCATCTCATCTTGTCTAAACGGGGAGAGTGGCCATCTGTCCGATACCCACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TCAAACCTGATCGTTCCCAGCCTCACAGAGCTGCTTTGTTCCAAGGTGACGCCTTCTGGGCCCCATCTGTCCTT  222

Query    1  ---------------------------------------------------------ATGGAGTCCAAGGTCTC  17
                                                                     |||||||||||||||||
Sbjct  223  CCTCACAGCACCCTCAGCACCTTAAGCCACCACCCTCAGCCACAATTTGGCAGAAGGATGGAGTCCAAGGTCTC  296

Query   18  AGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGA  91
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AGAAGGTGGCCTGAATGTGACCCTCACCATCCGCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGA  370

Query   92  AGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCA  165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGAAAGGAGAAACTGTGAAGAAGATGCGTGAGGAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCA  444

Query  166  GAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGA  239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAGAGGATTGTGACCATCACAGGCCCCACAGACGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGA  518

Query  240  GGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGC  313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGAGGATATCATCAACTCCATGAGCAACAGCCCTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGC  592

Query  314  CTGCCAGCCAGTGCGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCC  387
            |||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTGCCAGCCAGTGTGGGTCCCTGATCGGCAAAGGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCC  666

Query  388  CAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGC  461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGGTGCAGGTGGCTGGGGACATGCTGCCCAACTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGC  740

Query  462  CATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGGCCTACACAATCCAGGGACAGTATGCCA---  532
            |||||||||||||||||||||||||||||||||||||||||||.||        |||..||.|| .|||||   
Sbjct  741  CATCATCCAGTGCGTCAAGCAGATCTGTGTGGTCATGCTGGAGTCC--------CCACCGAAAG-GTGCCACCA  805

Query  533  -TCCCTCACCCGGATTTGACCAA------GCTCCAC--------------CAGTTGGCCATG---CAGCAAACC  582
             ||||| |||       |.||||      .||||||              |||.|||.||.|   .|||..|.|
Sbjct  806  TTCCCT-ACC-------GCCCAAAGCCCGCCTCCACCCCTGTCATTTTTGCAGGTGGTCAGGTAAGAGCCGATC  871

Query  583  CCCT---TTCCTCC--------CCTCGG------ACAG-ACCAACC-CCGCTTTCCCC------GGAG------  625
            |.||   ..|||||        ||||.|      ||.| |.||.|| ||||  |.|||      ||||      
Sbjct  872  CGCTCGCGGCCTCCACTGCCAACCTCAGCCTTTTACTGCAGCACCCGCCGC--TGCCCAAACTTGGAGTCGGAA  943

Query  626  ----AAAAGCTG--CCTTTACACTCC--TCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACG  691
                .||.||||  |..||.|.||||  .|||..||| ||            ||||||  .||||.|||    |
Sbjct  944  GCATCAAGGCTGAACTGTTTCCCTCCCACCCGCTGAA-CT------------GGCCAG--CTCAGCTCT----G  998

Query  692  CCAGCCCACCGG-----------------CCAG---CACTCATGAGCTCACCATTCC-CA-----ATGATCTAA  739
            ||.|||||..||                 ||||   ||.| |||      ||||.|| ||     ||| |.|||
Sbjct  999  CCCGCCCAGAGGAAGTGGGCCTACACAATCCAGGGACAGT-ATG------CCATCCCTCACCCGGATG-TGTAA  1064

Query  740  T---AG-GCTGCA--------------------------------TAATT-----------GGACGCCAAGGGA  766
            |   || ||||.|                                |||||           |||.|  |||..|
Sbjct 1065  TTCCAGTGCTGGAGGAAGAAGTTACCCTCAGATAAACGGTCGGTGTAATTCCAGTGCTGGGGGAAG--AAGTTA  1136

Query  767  CC-------AAA--ATCAATGAAATTCGACAGATGTCTGGAG------------CTCAGATCAAAATCGCC---  816
            ||       |||  .||..||.|||||  ||| || ||||.|            |||||||  |||.||.|   
Sbjct 1137  CCCTCAGATAAACGGTCGGTGTAATTC--CAG-TG-CTGGGGGAAGAAGTTACTCTCAGAT--AAACCGTCGGT  1204

Query  817  --AACGCCA-------CGGAAG--GGTCCTCAGAGCGTCAGATCACCATCACGG--GG----ACCCC-------  866
              ||..|||       .|||||  |.|.|||      ||||||.|     ||||  ||    |..||       
Sbjct 1205  GTAATTCCAGTGCTGGAGGAAGAAGTTACTC------TCAGATAA-----ACGGTCGGTGTAATTCCAGTGCTG  1267

Query  867  GGCCAACATCAGCCTTGCCCAGTATCTC--ATCAACG------------CCAG-GCTGACGTCCGAGGTCAC--  923
            ||..||.|  ||  ||.|      ||||  ||.||||            |||| ||||..|...||.||.||  
Sbjct 1268  GGGGAAGA--AG--TTAC------TCTCAGATAAACGGTCGGTGTAATTCCAGTGCTGGGGGAAGAAGTTACCC  1331

Query  924  ---------CGGGATGGG--------CA-CGCTG----------------------------------------  939
                     |||  |.||        || .||||                                        
Sbjct 1332  TCAGATAAACGG--TCGGTGTAATTCCAGTGCTGGGGGAAGAAGTTACCCTCAGATAAACCGTCGGTGTAATTC  1403

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1404  CAGTGCTGGGGGAAGAAGTTACCCTCAGATAAACCGTCGGTGTAATTCCAGTGCTGGGGGAAGAAGTTACTCTC  1477

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1478  AGATAAACCGTCGGTGTAATTCCAGTGCTGGAGGAAGAAGTTACTCTCAGATAAACGGTCGGTGTAATTCCAGT  1551

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1552  GCTGGGGGAAGAAGTTACCCTCAGATAAACCATTGGTGTAATTCCAGTGCTGAGGGAAGAAGTTACCCTCAGAT  1625

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1626  AAACCACTGGTGTAATTCCAGTGCTGGAGGAAGAAGTTACTCTCAGATAAACCGTCGGTGTAATTCCAGTGCTG  1699

Query  940  --------------------------------------------------------------------------  939
                                                                                      
Sbjct 1700  GAGGAAGAAGATACTCTCAGATCATCCATCGGAGGGGAACCCTGGGCGGCTCTGGGCTGTGCGGCTCAGACCCC  1773

Query  940  ---------------  939
                           
Sbjct 1774  TTAGGGGCCAAGAGA  1788

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