Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12029
- Subject:
- XR_002958606.1
- Aligned Length:
- 2317
- Identities:
- 938
- Gaps:
- 1378
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTATGATGCTCTGAGTTCAATACGTCTGAACCTTTGCTGTCTATGGATCTGCTCTAAACCTTATAGCCTGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGGGGAAGTTCCCAGGTCCCCCTTCAGTGAGGTCTTCCTGATGGATGCTGATATGGTCTGGCTGTGTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCTACAGGTCATGGGAGGGACTCAGTGGGAGCATCTCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGTCTAAACGGGGAGAGTGGCCATCTGTCCGATACCCACATCAAACCTGATCGTTCCCAGCCTCACAGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTTGTTCCAAGGTGACGCCTTCTGGGCCCCATCTGTCCTTCCTCACAGCACCCTCAGCACCTTAAGCCACCA 370
Query 1 -------------------------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCTCAGCCACAATTTGGCAGAAGGATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 444
Query 50 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 518
Query 124 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 592
Query 198 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 666
Query 272 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAA 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 667 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAA 740
Query 346 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 814
Query 420 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 888
Query 494 TCATGCTGGAG--------------------------------------------------------------- 504
|||||||||||
Sbjct 889 TCATGCTGGAGTCCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTT 962
Query 505 -------------------------------------------------------------------------- 504
Sbjct 963 GCAGGTGGTCAGGTAAGAGCCGATCCGCTCGCGGCCTCCACTGCCAACCTCAGCCTTTTACTGCAGCACCCGCC 1036
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1037 GCTGCCCAAACTTGGAGTCGGAAGCATCAAGGCTGAACTGTTTCCCTCCCACCCGCTGAACTGGCCAGCTCAGC 1110
Query 505 ------------------GCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGAT---TTGACCAAGCT 557
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1111 TCTGCCCGCCCAGAGGAAGCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGATCAGTTGACCAAGCT 1184
Query 558 CCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGC 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGC 1258
Query 632 TGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCC 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCC 1332
Query 706 AGCACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGA 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGCACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGA 1406
Query 780 AATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCA 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCA 1480
Query 854 TCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGG 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGG 1554
Query 928 ATGGGCACGCTG-------------------------------------------------------------- 939
||||||||||||
Sbjct 1555 ATGGGCACGCTGTAATCCTACCCAGCACCCTTCCCCCGCGTCACCCACCTGCCAGAGCCTAAGGCCCCCGGCTC 1628
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1629 TCGCACTCTGTACAGCCCACCTTCCCTGCCTCACAGATACCAATAGAGAGGTTTTCTTAATTAACAAAAGGACG 1702
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1703 TATGCCATGGAGAAACACACCCGCGCACACAGCTGCTCTCTACAGAGGCTGCAGGCTCCGCCGAGTCCCCCCTC 1776
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1777 AGTGTTATTTTATTTATGACTTACGCTCCCGTCTGCCCATGCACCGGCATGCAGTGGTAATTATTTTAGAAATA 1850
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1851 TTGTTCCTTGGTGTCAGCGTAGCTGTCTGTCTTAGGAGCTGGGTCGGCGTTCCGACAGCACTTCCTGTCCGCCC 1924
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1925 TTCTCCTCTGCCATCCAGAACCGTCCAGAACTGTTGCCTGAGACCCCTCCTCTCTCACACAGCCCTGCCATGCT 1998
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1999 GACTCGGTTTCCCCTCAGAGCCATTGTTGTCTGGGCTCGAGTTTCTGCCCCAGGTTGTGTGCTGGAATCGGGGG 2072
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2073 GTGGCTCTCCTGCCACCCATGGGGAGCGCCAGGAGAGGAGGGTCATGGAGGATGTTGGGGCTCTGACCCCAGGA 2146
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2147 GTGGGGTGGAGGGCGGAGCCTGCTGGGGGCCCTGCCTTCACAGAGATGCCGCGTGCTGGGAAGGCTCTTGGGGT 2220
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2221 CCCCTGAGCGTCTTCCAGGGTGGCTGGAGAGCACAGACGCGCCAGGGAGCCCCCTCTGTGCTCCTCAGAGTTCA 2294
Query 940 ----------------------- 939
Sbjct 2295 ATAAATGTCGTGGCCCCTCCTCA 2317
