Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12029
- Subject:
- XR_002958607.1
- Aligned Length:
- 2314
- Identities:
- 938
- Gaps:
- 1375
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTATGATGCTCTGAGTTCAATACGTCTGAACCTTTGCTGTCTATGGATCTGCTCTAAACCTTATAGCCTGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGGGGAAGTTCCCAGGTCCCCCTTCAGTGAGGTCTTCCTGATGGATGCTGATATGGTCTGGCTGTGTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCTACAGGTCATGGGAGGGACTCAGTGGGAGCATCTCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGTCTAAACGGGGAGAGTGGCCATCTGTCCGATACCCACATCAAACCTGATCGTTCCCAGCCTCACAGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTTGTTCCAAGGTGACGCCTTCTGGGCCCCATCTGTCCTTCCTCACAGCACCCTCAGCACCTTAAGCCACCA 370
Query 1 -------------------------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCTCAGCCACAATTTGGCAGAAGGATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 444
Query 50 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 518
Query 124 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 592
Query 198 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 666
Query 272 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAA 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 667 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAA 740
Query 346 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 814
Query 420 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 888
Query 494 TCATGCTGGAG--------------------------------------------------------------- 504
|||||||||||
Sbjct 889 TCATGCTGGAGTCCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTT 962
Query 505 -------------------------------------------------------------------------- 504
Sbjct 963 GCAGGTGGTCAGGTAAGAGCCGATCCGCTCGCGGCCTCCACTGCCAACCTCAGCCTTTTACTGCAGCACCCGCC 1036
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1037 GCTGCCCAAACTTGGAGTCGGAAGCATCAAGGCTGAACTGTTTCCCTCCCACCCGCTGAACTGGCCAGCTCAGC 1110
Query 505 ------------------GCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGATTTGACCAAGCTCCA 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTGCCCGCCCAGAGGAAGCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGATTTGACCAAGCTCCA 1184
Query 561 CCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGC 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAAAAGCTGC 1258
Query 635 CTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCCAGC 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACCGGCCAGC 1332
Query 709 ACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAAT 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAAT 1406
Query 783 TCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCA 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCA 1480
Query 857 CGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATG 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATG 1554
Query 931 GGCACGCTG----------------------------------------------------------------- 939
|||||||||
Sbjct 1555 GGCACGCTGTAATCCTACCCAGCACCCTTCCCCCGCGTCACCCACCTGCCAGAGCCTAAGGCCCCCGGCTCTCG 1628
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1629 CACTCTGTACAGCCCACCTTCCCTGCCTCACAGATACCAATAGAGAGGTTTTCTTAATTAACAAAAGGACGTAT 1702
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1703 GCCATGGAGAAACACACCCGCGCACACAGCTGCTCTCTACAGAGGCTGCAGGCTCCGCCGAGTCCCCCCTCAGT 1776
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1777 GTTATTTTATTTATGACTTACGCTCCCGTCTGCCCATGCACCGGCATGCAGTGGTAATTATTTTAGAAATATTG 1850
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1851 TTCCTTGGTGTCAGCGTAGCTGTCTGTCTTAGGAGCTGGGTCGGCGTTCCGACAGCACTTCCTGTCCGCCCTTC 1924
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1925 TCCTCTGCCATCCAGAACCGTCCAGAACTGTTGCCTGAGACCCCTCCTCTCTCACACAGCCCTGCCATGCTGAC 1998
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1999 TCGGTTTCCCCTCAGAGCCATTGTTGTCTGGGCTCGAGTTTCTGCCCCAGGTTGTGTGCTGGAATCGGGGGGTG 2072
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2073 GCTCTCCTGCCACCCATGGGGAGCGCCAGGAGAGGAGGGTCATGGAGGATGTTGGGGCTCTGACCCCAGGAGTG 2146
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2147 GGGTGGAGGGCGGAGCCTGCTGGGGGCCCTGCCTTCACAGAGATGCCGCGTGCTGGGAAGGCTCTTGGGGTCCC 2220
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2221 CTGAGCGTCTTCCAGGGTGGCTGGAGAGCACAGACGCGCCAGGGAGCCCCCTCTGTGCTCCTCAGAGTTCAATA 2294
Query 940 -------------------- 939
Sbjct 2295 AATGTCGTGGCCCCTCCTCA 2314
