Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12029
- Subject:
- XR_002958610.1
- Aligned Length:
- 1763
- Identities:
- 782
- Gaps:
- 944
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTATGATGCTCTGAGTTCAATACGTCTGAACCTTTGCTGTCTATGGATCTGCTCTAAACCTTATAGCCTGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGGGGAAGTTCCCAGGTCCCCCTTCAGTGAGGTCTTCCTGATGGATGCTGATATGGTCTGGCTGTGTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCTACAGGTCATGGGAGGGACTCAGTGGGAGCATCTCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGTCTAAACGGGGAGAGTGGCCATCTGTCCGATACCCACATCAAACCTGATCGTTCCCAGCCTCACAGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTTGTTCCAAGGTGACGCCTTCTGGGCCCCATCTGTCCTTCCTCACAGCACCCTCAGCACCTTAAGCCACCA 370
Query 1 -------------------------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCTCAGCCACAATTTGGCAGAAGGATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 444
Query 50 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 518
Query 124 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 592
Query 198 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 666
Query 272 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAA 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 667 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAA 740
Query 346 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 814
Query 420 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 888
Query 494 TCATGCTGGAG--------------------------------------------------------------- 504
|||||||||||
Sbjct 889 TCATGCTGGAGTCCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTT 962
Query 505 -------------------------------------------------------------------------- 504
Sbjct 963 GCAGGTGGTCAGGTAAGAGCCGATCCGCTCGCGGCCTCCACTGCCAACCTCAGCCTTTTACTGCAGCACCCGCC 1036
Query 505 -------GCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGATTT----------GACCA-------- 553
||||||||||||||||||||||||||||||||||||||||||.| |.|||
Sbjct 1037 GCTGCCCGCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGATGTCTGGACGCCAGCCCACCGGCCAG 1110
Query 554 --------AGCTCCACCAGT----------------TGGCCATGCAGCAAA------------CCCCCT----- 586
|||| |||||.| |||.|||||.||..| ||||||
Sbjct 1111 CACTCATGAGCT-CACCATTCCCAATGATGGACCTGTGGTCATGCTGCCGAGTCAGCTATGTTCCCCCTCCCCA 1183
Query 587 -----------------TTCCT----CCCCTCGGA-----------CAGA--------CCA------------- 607
|.||| |||.||.|| |||| |||
Sbjct 1184 TGCGGGCCGTGCTGCTGTCCCTGGCCCCCATCAGAGATGAGCCCTTCAGATCTCTCTGCCACCAGGGAGGAAGA 1257
Query 608 ------------------------------------------ACCCC---GCTTTCCCC--GGAGAAAAGCTG- 633
||.|| |.|.|||.| |||.||..||||
Sbjct 1258 TGCAGCCAGGCAGAGATGGCCTCTAAGGTGAGCAGAGTTGAGACACCATAGGTCTCCTCAGGGACAAGGGCTGG 1331
Query 634 -----------CCTTT---------------------ACACTCCTCCGAAGAAGC----TCA-------AAAT- 663
|||.| .|||.||.|.||...||| ||| ||.|
Sbjct 1332 CTGGCAGGGCACCTGTGTCCCACCATGGAGCTGCTGCTCACCCCACAGACTGAGCCCCTTCACGCTTGCAAGTG 1405
Query 664 ----------CTG-----------ATGGGCCAG----------TCAT-CAG------------GTCTGG--ACG 691
||| ||||.|||| .||| ||| |||||| |||
Sbjct 1406 GACGTCCCTCCTGCATGCCGCCACATGGCCCAGCCCAGCCCTTCCATCCAGCGTCTTACTGGTGTCTGGCCACG 1479
Query 692 -------CCAGCCCA----CCGGCCAGCACT-------------------CATGA--GCTCACCATTC---CCA 730
||.|.||| ||.| |||.|| ||||| |..|.||.||| |||
Sbjct 1480 TCTCTTTCCTGTCCAAGCTCCAG--AGCTCTCATCCGTGGCCTATGCGTGCATGAAGGGACTCCGTTCCATCCA 1551
Query 731 ATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAG 804
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 ATG--CTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAG 1623
Query 805 ATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATCACCATCACGGGGACCCCGGCCAACATCAG 878
||||||||||||||||||||
Sbjct 1624 ATCAAAATCGCCAACGCCAC------------------------------------------------------ 1643
Query 879 CCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCACCGGGATGGGCACGCTG 939
Sbjct 1644 ------------------------------------------------------------- 1643
