Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12029
- Subject:
- XR_002958612.1
- Aligned Length:
- 1727
- Identities:
- 782
- Gaps:
- 908
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTATGATGCTCTGAGTTCAATACGTCTGAACCTTTGCTGTCTATGGATCTGCTCTAAACCTTATAGCCTGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGGGGAAGTTCCCAGGTCCCCCTTCAGTGAGGTCTTCCTGATGGATGCTGATATGGTCTGGCTGTGTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCTACAGGTCATGGGAGGGACTCAGTGGGAGCATCTCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGTCTAAACGGGGAGAGTGGCCATCTGTCCGATACCCACATCAAACCTGATCGTTCCCAGCCTCACAGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTTGTTCCAAGGTGACGCCTTCTGGGCCCCATCTGTCCTTCCTCACAGCACCCTCAGCACCTTAAGCCACCA 370
Query 1 -------------------------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCTCAGCCACAATTTGGCAGAAGGATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 444
Query 50 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 518
Query 124 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 592
Query 198 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 666
Query 272 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAA 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 667 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAA 740
Query 346 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 814
Query 420 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 888
Query 494 TCATGCTGGAG--------------------------------------------------------------- 504
|||||||||||
Sbjct 889 TCATGCTGGAGGATGTGCTTGTAGCAGGGACGTGCGAGAGGAGGGAGCTCTGCACTGAGGAAGGATGCATGGCC 962
Query 505 ---------------------------------------------GCCTACACAATCCAGGGACAGTATGCCAT 533
|||||||||||||||||||||||||||||
Sbjct 963 CGACGACCGGGCGTCTGTGCCGCTGTGTCCGGACCTCCGTCTGCTGCCTACACAATCCAGGGACAGTATGCCAT 1036
Query 534 CCCTCACCCGGATTT----------GACCA----------------AGCTCCACCAGT---------------- 565
|||||||||||||.| |.||| |||| |||||.|
Sbjct 1037 CCCTCACCCGGATGTCTGGACGCCAGCCCACCGGCCAGCACTCATGAGCT-CACCATTCCCAATGATGGACCTG 1109
Query 566 TGGCCATGCAGCAAA------------CCCCCT----------------------TTCCT----CCCCTCGGA- 600
|||.|||||.||..| |||||| |.||| |||.||.||
Sbjct 1110 TGGTCATGCTGCCGAGTCAGCTATGTTCCCCCTCCCCATGCGGGCCGTGCTGCTGTCCCTGGCCCCCATCAGAG 1183
Query 601 ----------CAGA--------CCA------------------------------------------------- 607
|||| |||
Sbjct 1184 ATGAGCCCTTCAGATCTCTCTGCCACCAGGGAGGAAGATGCAGCCAGGCAGAGATGGCCTCTAAGGTGAGCAGA 1257
Query 608 ------ACCCC---GCTTTCCCC--GGAGAAAAGCTG------------CCTTT-------------------- 638
||.|| |.|.|||.| |||.||..|||| |||.|
Sbjct 1258 GTTGAGACACCATAGGTCTCCTCAGGGACAAGGGCTGGCTGGCAGGGCACCTGTGTCCCACCATGGAGCTGCTG 1331
Query 639 -ACACTCCTCCGAAGAAGC----TCA-------AAAT-----------CTG-----------ATGGGCCAG--- 675
.|||.||.|.||...||| ||| ||.| ||| ||||.||||
Sbjct 1332 CTCACCCCACAGACTGAGCCCCTTCACGCTTGCAAGTGGACGTCCCTCCTGCATGCCGCCACATGGCCCAGCCC 1405
Query 676 -------TCAT-CAG------------GTCTGG--ACG-------CCAGCCCA----CCGGCCAGCACT----- 711
.||| ||| |||||| ||| ||.|.||| ||.| |||.||
Sbjct 1406 AGCCCTTCCATCCAGCGTCTTACTGGTGTCTGGCCACGTCTCTTTCCTGTCCAAGCTCCAG--AGCTCTCATCC 1477
Query 712 --------------CATGA--GCTCACCATTC---CCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGA 766
||||| |..|.||.||| |||||| |||||||||||||||||||||||||||||||
Sbjct 1478 GTGGCCTATGCGTGCATGAAGGGACTCCGTTCCATCCAATG--CTAATAGGCTGCATAATTGGACGCCAAGGGA 1549
Query 767 CCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAG 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1550 CCAAAATCAATGAAATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCAC---------------- 1607
Query 841 CGTCAGATCACCATCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTC 914
Sbjct 1608 -------------------------------------------------------------------------- 1607
Query 915 CGAGGTCACCGGGATGGGCACGCTG 939
Sbjct 1608 ------------------------- 1607
