Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12029
- Subject:
- XR_002958613.1
- Aligned Length:
- 2321
- Identities:
- 938
- Gaps:
- 1382
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTATGATGCTCTGAGTTCAATACGTCTGAACCTTTGCTGTCTATGGATCTGCTCTAAACCTTATAGCCTGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGGGGAAGTTCCCAGGTCCCCCTTCAGTGAGGTCTTCCTGATGGATGCTGATATGGTCTGGCTGTGTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCTACAGGTCATGGGAGGGACTCAGTGGGAGCATCTCAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGTCTAAACGGGGAGAGTGGCCATCTGTCCGATACCCACATCAAACCTGATCGTTCCCAGCCTCACAGAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTTTGTTCCAAGGTGACGCCTTCTGGGCCCCATCTGTCCTTCCTCACAGCACCCTCAGCACCTTAAGCCACCA 370
Query 1 -------------------------ATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCCTCAGCCACAATTTGGCAGAAGGATGGAGTCCAAGGTCTCAGAAGGTGGCCTGAATGTGACCCTCACCATCC 444
Query 50 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTGCTGATGCATGGAAAGGAAGTTGGAAGCATCATCGGGAAGAAAGGAGAAACTGTGAAGAAGATGCGTGAG 518
Query 124 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGAGTGGTGCAAGGATCAACATCTCAGAGGGAAACTGCCCAGAGAGGATTGTGACCATCACAGGCCCCACAGA 592
Query 198 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGCCATCTTCAAGGCCTTTGCCATGATCGCATACAAGTTTGAGGAGGATATCATCAACTCCATGAGCAACAGCC 666
Query 272 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGCGGGTCCCTGATCGGCAAA 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 667 CTGCCACCAGCAAGCCCCCAGTGACGCTGAGGCTGGTGGTGCCTGCCAGCCAGTGTGGGTCCCTGATCGGCAAA 740
Query 346 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGGCTCCAAGATCAAGGAGATCAGGGAGTCCACAGGTGCCCAGGTGCAGGTGGCTGGGGACATGCTGCCCAA 814
Query 420 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCCACGGAGCGAGCGGTGACCATCTCGGGGACCCCAGATGCCATCATCCAGTGCGTCAAGCAGATCTGTGTGG 888
Query 494 TCATGCTGGA---------------------------------------------------------------- 503
||||||||||
Sbjct 889 TCATGCTGGAGTCCCCACCGAAAGGTGCCACCATTCCCTACCGCCCAAAGCCCGCCTCCACCCCTGTCATTTTT 962
Query 504 -------------------------------------------------------------------------- 503
Sbjct 963 GCAGGTGGTCAGGTAAGAGCCGATCCGCTCGCGGCCTCCACTGCCAACCTCAGCCTTTTACTGCAGCACCCGCC 1036
Query 504 -------------------------------------------------------------------------- 503
Sbjct 1037 GCTGCCCAAACTTGGAGTCGGAAGCATCAAGGCTGAACTGTTTCCCTCCCACCCGCTGAACTGGCCAGCTCAGC 1110
Query 504 ---------------------GGCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGAT---TTGACCA 553
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1111 TCTGCCCGCCCAGAGGAAGTGGGCCTACACAATCCAGGGACAGTATGCCATCCCTCACCCGGATCAGTTGACCA 1184
Query 554 AGCTCCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAA 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCTCCACCAGTTGGCCATGCAGCAAACCCCCTTTCCTCCCCTCGGACAGACCAACCCCGCTTTCCCCGGAGAA 1258
Query 628 AAGCTGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACC 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAGCTGCCTTTACACTCCTCCGAAGAAGCTCAAAATCTGATGGGCCAGTCATCAGGTCTGGACGCCAGCCCACC 1332
Query 702 GGCCAGCACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCA 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGCCAGCACTCATGAGCTCACCATTCCCAATGATCTAATAGGCTGCATAATTGGACGCCAAGGGACCAAAATCA 1406
Query 776 ATGAAATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATC 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 ATGAAATTCGACAGATGTCTGGAGCTCAGATCAAAATCGCCAACGCCACGGAAGGGTCCTCAGAGCGTCAGATC 1480
Query 850 ACCATCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCAC 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACCATCACGGGGACCCCGGCCAACATCAGCCTTGCCCAGTATCTCATCAACGCCAGGCTGACGTCCGAGGTCAC 1554
Query 924 CGGGATGGGCACGCTG---------------------------------------------------------- 939
||||||||||||||||
Sbjct 1555 CGGGATGGGCACGCTGTAATCCTACCCAGCACCCTTCCCCCGCGTCACCCACCTGCCAGAGCCTAAGGCCCCCG 1628
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1629 GCTCTCGCACTCTGTACAGCCCACCTTCCCTGCCTCACAGATACCAATAGAGAGGTTTTCTTAATTAACAAAAG 1702
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1703 GACGTATGCCATGGAGAAACACACCCGCGCACACAGCTGCTCTCTACAGAGGCTGCAGGCTCCGCCGAGTCCCC 1776
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1777 CCTCAGTGTTATTTTATTTATGACTTACGCTCCCGTCTGCCCATGCACCGGCATGCAGTGGTAATTATTTTAGA 1850
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1851 AATATTGTTCCTTGGTGTCAGCGTAGCTGTCTGTCTTAGGAGCTGGGTCGGCGTTCCGACAGCACTTCCTGTCC 1924
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1925 GCCCTTCTCCTCTGCCATCCAGAACCGTCCAGAACTGTTGCCTGAGACCCCTCCTCTCTCACACAGCCCTGCCA 1998
Query 940 -------------------------------------------------------------------------- 939
Sbjct 1999 TGCTGACTCGGTTTCCCCTCAGAGCCATTGTTGTCTGGGCTCGAGTTTCTGCCCCAGGTTGTGTGCTGGAATCG 2072
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2073 GGGGGTGGCTCTCCTGCCACCCATGGGGAGCGCCAGGAGAGGAGGGTCATGGAGGATGTTGGGGCTCTGACCCC 2146
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2147 AGGAGTGGGGTGGAGGGCGGAGCCTGCTGGGGGCCCTGCCTTCACAGAGATGCCGCGTGCTGGGAAGGCTCTTG 2220
Query 940 -------------------------------------------------------------------------- 939
Sbjct 2221 GGGTCCCCTGAGCGTCTTCCAGGGTGGCTGGAGAGCACAGACGCGCCAGGGAGCCCCCTCTGTGCTCCTCAGAG 2294
Query 940 --------------------------- 939
Sbjct 2295 TTCAATAAATGTCGTGGCCCCTCCTCA 2321
