Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12036
Subject:
NM_001271581.3
Aligned Length:
2241
Identities:
233
Gaps:
2007

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGAGTCTGGTTAAATAAAGATGACTATATCAGAGACTTGAAAAGGATCATTCTCTGTTTTCTGATAGTGTA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TATGGCCATTTTAGTGGGCACAGATCAGGATTTTTACAGTTTACTTGGAGTGTCCAAAACTGCAAGCAGTAGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAATAAGACAAGCTTTCAAGAAATTGGCATTGAAGTTACATCCTGATAAAAACCCGAATAACCCAAATGCACAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGCGATTTTTTAAAAATAAATAGAGCATATGAAGTACTCAAAGATGAAGATCTACGGAAAAAGTATGACAAATA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGAGAAAAGGGACTTGAGGATAATCAAGGTGGCCAGTATGAAAGCTGGAACTATTATCGTTATGATTTTGGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTTATGATGATGATCCTGAAATCATAACATTGGAAAGAAGAGAATTTGATGCTGCTGTTAATTCTGGAGAACTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGGTTTGTAAATTTTTACTCCCCAGGCTGTTCACACTGCCATGATTTAGCTCCCACATGGAGAGACTTTGCTAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGAAGTGGATGGGTTACTTCGAATTGGAGCTGTTAACTGTGGTGATGATAGAATGCTTTGCCGAATGAAAGGAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCAACAGCTATCCCAGCCTCTTCATTTTTCGGTCTGGAATGGCCCCAGTGAAATATCATGGAGACAGATCAAAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GAGAGTTTAGTGAGTTTTGCAATGCAGCATGTTAGAAGTACAGTGACAGAACTTTGGACAGGAAATTTTGTCAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTCCATACAAACTGCTTTTGCTGCTGGTATTGGCTGGCTGATCACTTTTTGTTCAAAAGGAGGAGATTGTTTGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTTCACAGACACGACTCAGGCTTAGTGGCATGTTGTTTCTCAACTCATTGGATGCTAAAGAAATATATTTGGAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTAATACATAATCTTCCAGATTTTGAACTACTTTCGGCAAACACACTAGAGGATCGTTTGGCTCATCATCGGTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCTGTTATTTTTTCATTTTGGAAAAAATGAAAATTCAAATGATCCTGAGCTGAAAAAACTAAAAACTCTACTTA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AAAATGATCATATTCAAGTTGGCAGGTTTGACTGTTCCTCTGCACCAGACATCTGTAGTAATCTGTATGTTTTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAGCCGTCTCTAGCAGTATTTAAAGGACAAGGAACCAAAGAATATGAAATTCATCATGGAAAGAAGATTCTATA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGATATACTTGCCTTTGCCAAAGAAAGTGTGAATTCTCATGTTACCACGCTTGGACCTCAAAATTTTCCTGCCA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATGACAAAGAACCATGGCTTGTTGATTTCTTTGCCCCCTGGTGTCCACCATGTCGAGCTTTACTACCAGAGTTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CGAAGAGCATCAAATCTTCTTTATGGTCAGCTTAAGTTTGGTACACTAGATTGTACAGTTCATGAGGGACTCTG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TAACATGTATAACATTCAGGCTTATCCAACAACAGTGGTATTCAACCAGTCCAACATTCATGAGTATGAAGGAC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  ATCACTCTGCTGAACAAATCTTGGAGTTCATAGAGGATCTTATGAATCCTTCAGTGGTCTCCCTTACACCCACC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACCTTCAACGAACTAGTTACACAAAGAAAACACAACGAAGTCTGGATGGTTGATTTCTATTCTCCGTGGTGTCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TCCTTGCCAAGTCTTAATGCCAGAATGGAAAAGAATGGCCCGGACATTAACTGGACTGATCAACGTGGGCAGTA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TAGATTGCCAACAGTATCATTCTTTTTGTGCCCAGGAAAACGTTCAAAGATACCCTGAGATAAGATTTTTTCCC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CCAAAATCAAATAAAGCTTATCATTATCACAGTTACAATGGTTGGAATAGGGATGCTTATTCCCTGAGAATCTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGGTCTAGGATTTTTACCTCAAGTATCCACAGATCTAACACCTCAGACTTTCAGTGAAAAAGTTCTACAAGGGA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAAATCATTGGGTGATTGATTTCTATGCTCCTTGGTGTGGACCTTGCCAGAATTTTGCTCCAGAATTTGAGCTC  1998

Query    1  ---------ATGATTAAAGGAAAAGTGAAAGCTGGAAAAGTAGACTGTCAGGCTTATGCTCAGACATGCCAGAA  65
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TTGGCTAGGATGATTAAAGGAAAAGTGAAAGCTGGAAAAGTAGACTGTCAGGCTTATGCTCAGACATGCCAGAA  2072

Query   66  AGCTGGGATCAGGGCCTATCCAACTGTTAAGTTTTATTTCTACGAAAGAGCAAAGAGAAATTTTCAAGAAGAGC  139
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AGCTGGGATCAGGGCCTATCCAACTGTTAAATTTTATTTCTACGAAAGAGCAAAGAGAAATTTTCAAGAAGAGC  2146

Query  140  AGATAAATACCAGAGATGCAAAAGCAATCGCTGCCTTAATAAGTGAAAAATTGGAAACTCTCCGAAATCAAGGC  213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AGATAAATACCAGAGATGCAAAAGCAATCGCTGCCTTAATAAGTGAAAAATTGGAAACTCTCCGAAATCAAGGC  2220

Query  214  AAGAGGAATAAGGATGAACTT  234
            |||||||||||||||||||||
Sbjct 2221  AAGAGGAATAAGGATGAACTT  2241

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