Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12046
Subject:
XM_006522795.2
Aligned Length:
2383
Identities:
1311
Gaps:
914

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGAGACATATGAGAGTCCCTCTCCTCTCCCGCGTGAGCCCGCAGGAGAAGCGATGATGGAGAACCGAGCTTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCTTCCAAGTGCTGCCCCATGAACAGTCTCCACCACCTCCCCTGCAAACGTCCAGTGATGCAGAGGTAATGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACGTTGGCTCTGGTGGTGATGGACAGTCCGAACCTCCTGCCGACGACCCATTCAACTTCTACGGAGCTTCTCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTCTCCAAAGGATCCTTCTCTAAGGGCCGCCTCCTCATAGACCCGAACTGTAGTGGCCACAGCCCGCGCACTGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCGGCACGCACCTGCGGTCCGGAAGTTCTCCCCTGACCTTAAGTTGCTTAAGGATGTAAAGATTAGCGTGAGCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTACTGAGAGCTGCAGGAGTAAGGACAGGAAGGTGCTGTACACAGGAGTAGAACGCAGCACTCGGCCTGAGTGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGCCAGCTCCTTAGTCCTGTCAGTGGGGACGTGCATGCTTGTCCCTTTGGCGGGAGTGTTGGTAATGGGGTAGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCTAGGGGGTGAGAGTGCAGATAAGAAGGATGAGGAAAATGAGCTGGATCAGGAAAAGAGAGTGGAGTATGCAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGCTCGATGAGTTAGAAGATTTTACTGACAATTTGGAGCTAGATGAAGAAGGAACAGGCGGGTTCACGGCTAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCAATCGTTCAAAGAGACAGAGTGGATGAAGAGGCCTTGAATTTCTCCTATGAGGATGACTTTGACAATGATGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGACGCTTTACTAGAAGAAGGTCTCTGTGCTCCCAAGAAGAGGCGAATGGAGGAAAAATATGGCGGAGACAGTG  814

Query    1  -----------------------------------ATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGC  39
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCATCCATCTGATGGAGAGACAAGTGTACAGCCAATGATGACCAAGATTAAAACAGTGCTCAAAAGTCGTGGC  888

Query   40  CGCCCACCTACAGAGCCGCTGCCCGACGGGTGGATCATGACATTCCATAACTCTGGAGTCCCGGTGTACCTACA  113
            ||.||||||||||||||..||||.||.||.|||||||||||.||.|||||.|||||||||||.||.|||||.||
Sbjct  889  CGTCCACCTACAGAGCCATTGCCTGATGGATGGATCATGACTTTTCATAATTCTGGAGTCCCTGTATACCTGCA  962

Query  114  CAGAGAGTCTCGGGTGGTCACCTGGTCCAGGCCATACTTCTTGGGAACGGGAAGCATACGGAAACACGACCCTC  187
            ||||||||||||.||||||||.||||||||.||.||||||||||||||.|||||||||||||||||.||.||||
Sbjct  963  CAGAGAGTCTCGAGTGGTCACTTGGTCCAGACCCTACTTCTTGGGAACAGGAAGCATACGGAAACATGATCCTC  1036

Query  188  CTCTGAGTAGCATCCCTTGTCTGCATTATAAGAAAATGAAGGACAACGAGGAACGGGAGCAAAGCAGTGACCTC  261
            ||||.||.||.|||||.||.||.|||||||||||||||||||||||.||||||||.||.||||.|.||||.||.
Sbjct 1037  CTCTAAGCAGTATCCCCTGCCTACATTATAAGAAAATGAAGGACAATGAGGAACGAGAACAAAACTGTGATCTT  1110

Query  262  ACCCCTAGTGGGGATGTGTCCCCCGTCAAGCCCCTGAGCCGATCTGCAGAGCTGGAGTTTCCC-CTGGATGAGC  334
            .||||.|||||.||.|||||.||.|||||||||.||.|.||.|||||||||.|||| |||||| |||||.||||
Sbjct 1111  GCCCCCAGTGGAGAGGTGTCACCTGTCAAGCCCTTGGGTCGGTCTGCAGAGTTGGA-TTTCCCTCTGGAAGAGC  1183

Query  335  CTGACTCTATGGGTGCTGACCCGGGGCCCCCGGACGAGAAAGACCCACTAGGGGCTGAGGCAGCCCCTGGGGCC  408
            |||||||.|||||||..|||.|.|||.||..|||.|||||.||||||.|.|||||||||||||||.||||.|||
Sbjct 1184  CTGACTCCATGGGTGGAGACTCAGGGTCCATGGATGAGAAGGACCCATTGGGGGCTGAGGCAGCCGCTGGAGCC  1257

Query  409  CTGGGGCAGGTGAAGGCCAAAGTCGAGGTGTGCAAAGATGAATCCGTTGATCTCGAGGAATTTCGAAGCTACCT  482
            |||||.||.||||||||.|||||.||||||||||||||||||||.||||||||.|||||||||||.|..|||||
Sbjct 1258  CTGGGACAAGTGAAGGCTAAAGTTGAGGTGTGCAAAGATGAATCAGTTGATCTGGAGGAATTTCGTAATTACCT  1331

Query  483  GGAGAAGCGTTTTGACTTTGAGCAAGTTACTGTGAAAAAATTCAGGACTTGGGCTGAGCGGCGGCAATTCAATC  556
            .||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||.|||||.|
Sbjct 1332  TGAGAAGCGTTTTGACTTTGAACAAGTAACTGTGAAAAAATTCAGGACTTGGGCTGAGCGGCGTCAGTTCAACC  1405

Query  557  GGGAAATGAAGCGGAAGCAGGCGGAGTCCGAGAGGCCCATCTTGCCAGCCAATCAGAAGCTCATTACTTTATCA  630
            |.||.|||||||||||||||||.|||||.||||||||||||.||||||||||.||||||||.||.|||.||||.
Sbjct 1406  GTGAGATGAAGCGGAAGCAGGCCGAGTCAGAGAGGCCCATCCTGCCAGCCAACCAGAAGCTGATCACTCTATCT  1479

Query  631  GTGCAAGATGCACCCACAAAGAAAGAGTTTGTTATTAACCCCAACGGGAAATCCGAGGTCTGCATCCTGCACGA  704
            ||.|||||||||||||||||||||||||||||.||.||.|||||.|||||.||.|||||.||||||||||||||
Sbjct 1480  GTACAAGATGCACCCACAAAGAAAGAGTTTGTCATCAATCCCAATGGGAAGTCTGAGGTTTGCATCCTGCACGA  1553

Query  705  GTACATGCAGCGTGTCCTCAAGGTCCGCCCTGTCTATAATTTCTTTGAATGTGAGAACCCAAGTGAGCCTTTTG  778
            .||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||
Sbjct 1554  ATACATGCAGCGTGTCCTCAAGGTCCGCCCTGTTTATAATTTCTTTGAATGTGAGAATCCAAGTGAGCCTTTTG  1627

Query  779  GTGCCTCGGTGACCATTGATGGTGTGACTTACGGATCTGGAACTGCAAGCAGCAAAAAACTTGCGAAGAATAAA  852
            |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628  GTGCCTCCGTGACCATTGATGGTGTGACTTACGGATCTGGAACTGCAAGCAGCAAAAAACTTGCGAAGAATAAA  1701

Query  853  GCTGCCCGAGCTACACTGGAAATCCTCATCCCTGACTTTGTTAAACAGACCTCTGAAGAGAAGCCCAAAGACAG  926
            |||||||||||.||.||||||||.||||||||||||||||||||||||||||||||.||||||||.||||||||
Sbjct 1702  GCTGCCCGAGCCACCCTGGAAATTCTCATCCCTGACTTTGTTAAACAGACCTCTGAGGAGAAGCCTAAAGACAG  1775

Query  927  TGAAGAACTCGAG-------------------------------------------------------------  939
            |||||||||.|||                                                             
Sbjct 1776  TGAAGAACTGGAGATTCTCTTCTGCTTTCAAGAAGCTCTGTTTGGCCTTCAGTTGGATGAGTCTACAAACAGAT  1849

Query  940  --TATTTTAACCACATCAGCATCGAGGACTCGCGGGTCTACGAGCTGACCAGCAAGGCTGGGCTGTTGTCTCCA  1011
              |||||||||||||||||.||.|||||.||.||.|||||.||||||||.||||||||||||||||||||||||
Sbjct 1850  GCTATTTTAACCACATCAGTATTGAGGATTCACGAGTCTATGAGCTGACAAGCAAGGCTGGGCTGTTGTCTCCA  1923

Query 1012  TATCAGATCCTCCACGAGTGCCTTAAAAGAAACCATGGGATGGGTGACACGTCTATCAAGTTTGAAGTGGTTCC  1085
            ||||||||||||||.|||||||||||||||||||||||.|||||||||||.||.||||||||||||||||||||
Sbjct 1924  TATCAGATCCTCCATGAGTGCCTTAAAAGAAACCATGGAATGGGTGACACATCCATCAAGTTTGAAGTGGTTCC  1997

Query 1086  TGGGAAAAACCAGAAGAGTGAATACGTCATGGCGTGTGGCAAGCACACAGTGCGCGGGTGGTGTAAGAACAAGA  1159
            ||||||||||||||||||||||||.||.|||||.||.|||||.||||||||||||||||||||||||||.||..
Sbjct 1998  TGGGAAAAACCAGAAGAGTGAATATGTTATGGCATGCGGCAAACACACAGTGCGCGGGTGGTGTAAGAATAAAC  2071

Query 1160  GAGTTGGAAAGCAGTTAGCCTCACAGAAGATCCTTCAGCTGCTGCACCCACATGTCAAGAACTGGGGGTCTTTA  1233
            |||||||.||.||.|||||.||.|||||.|||||||||||.||||||||||||||||||||||||||.||.|||
Sbjct 2072  GAGTTGGGAAACAATTAGCATCTCAGAAAATCCTTCAGCTACTGCACCCACATGTCAAGAACTGGGGTTCCTTA  2145

Query 1234  CTGCGCATGTATGGCCGTGAGAGCAGCAAGATGGTCAAGCAGGAGACATCGGACAAGAGTGTGATTGAGCTGCA  1307
            ||.|||||||||||.||||||||||||||.|||||||||||||||||.||.||||||||||||||.|||||.||
Sbjct 2146  CTACGCATGTATGGTCGTGAGAGCAGCAAAATGGTCAAGCAGGAGACCTCTGACAAGAGTGTGATAGAGCTACA  2219

Query 1308  GCAGTATGCCAAGAAGAACAAGCCCAACCTGCACATCCTCAGCAAGCTCCAAGAGGAGATGAAGAGGCTAGCTG  1381
            ||||||||||||||||||||.|||||||||.||||||||.||||||||.|||||.||||||||||||||.||||
Sbjct 2220  GCAGTATGCCAAGAAGAACAGGCCCAACCTTCACATCCTGAGCAAGCTACAAGAAGAGATGAAGAGGCTGGCTG  2293

Query 1382  AGGAAAGGGAGGAGACTCGAAAGAAGCCCAAGATGTCCATTGTGGCGTCCGCCCAGCCTGGCGGTGAGCCCCTG  1455
            ..||..|||||||||||||.|||||.|||||||||||.|||||.||.||.|||||||||||.|||||||||.||
Sbjct 2294  CAGAGCGGGAGGAGACTCGGAAGAAACCCAAGATGTCAATTGTAGCATCTGCCCAGCCTGGTGGTGAGCCCTTG  2367

Query 1456  TGCACCGTGGACGTG  1470
            |||||.||.||.||.
Sbjct 2368  TGCACAGTCGATGTA  2382

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