Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12085
- Subject:
- NR_132407.1
- Aligned Length:
- 1796
- Identities:
- 920
- Gaps:
- 847
Alignment
Query 1 --------------------ATGG--------------GCACTGAGAA-----AGTGATTGACCGAAAAGTGGA 35
|||| |||| |||.| .||| |.| |||||
Sbjct 1 CAAGCGCAGACTGCCATAAGATGGCGTCCGTGGCGGCTGCAC-GAGCAGTTCCCGTG---GGC-----AGTGG- 64
Query 36 GCT--------TGAAAAGGAGGAT-GGTCTTGTA---CTTCACAAACGCCTAAGCCAGGTGGACCCAGAAAT-- 95
||| ||.||.|||...| ..||||||| .||| .|...||||.|.|.|||...||||
Sbjct 65 GCTCAGGGGCCTGCAACGGACCCTACCTCTTGTAGTGATTC-------TCGGGGCCACGGGCACCGGCAAATCC 131
Query 96 -GGCTGCCAAGCTGCATCCA---CA------------TGACA-----AACGCAAAGTGGC------CAGGAGCT 142
.||||.| |.||||.|.| || |||.| |.||| ||.| ||||||||
Sbjct 132 ACGCTGGC--GTTGCAGCTAGGCCAGCGGCTCGGCGGTGAGATCGTCAGCGC----TGACTCCATGCAGGAGCT 199
Query 143 TGCAAGTTTTTGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGT 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 200 TGCAAGTTTTTGAAGAAACAGGAATCTCTCATAGTGAATTTCTCCATCGTCAACATACGGAAGAAGGTGGTGGT 273
Query 217 CCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGACCAGGC------AGATGA 284
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 274 CCCCTTGGAGGTCCTCTGAAGTTCTCTAACCCTTGCATCCTTTGGCTTCATGCTGACCAGGCAGTTCTAGATGA 347
Query 285 GCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCT 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 348 GCGCTTGGATAAGAGGGTGGATGACATGCTTGCTGCTGGGCTCTTGGAGGAACTAAGAGATTTTCACAGACGCT 421
Query 359 ATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 ATAATCAGAAGAATGTTTCGGAAAATAGCCAGGACTATCAACATGGTATCTTCCAATCAATTGGCTTCAAGGAA 495
Query 433 TTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 TTTCACGAGTACCTGATCACTGAGGGAAAATGCACACTGGAGACTAGTAACCAGCTTCTAAAGAAAGGTATTGA 569
Query 507 GGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAAAACCGATGGGTTAAAAACCGTTTTTTGAGCAGAC 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 GGCTCTGAAACAAGTAACTAAGAGATATGCCCGGAAACAAAACCGATGGGTTAAAAACCGTTTTTTGAGCAGAC 643
Query 581 CTGGTCCCATTGTCCCCCCTGTCTATGGCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 CTGGTCCCATTGTCCCCCCTGTCTATGGCTTAGAGGTATCTGATGTCTCGAAGTGGGAAGAGTCTGTTCTTGAA 717
Query 655 CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAA 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 CCTGCTCTTGAAATCGTGCAAAGTTTCATCCAGGGCCACAAGCCTACAGCCACTCCAATAAAGATGCCATACAA 791
Query 729 TGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTCTGTGATCGAATCATCATTGGGGATCGCGAATGGG 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 792 TGAAGCTGAGAACAAGAGAAGTTATCACCTGTGTGACCTCTGTGATCGAATCATCATTGGGGATCGCGAATGGG 865
Query 803 CAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGATGCTGTCAAC 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 866 CAGCGCACATAAAATCCAAATCCCACTTGAACCAACTGAAGAAAAGAAGAAGATTGGACTCAGATGCTGTCAAC 939
Query 877 ACCATAGAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAAGGGATCCCCAGGGCAGAATGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 940 ACCATAGAAAGTCAGAGTGTTTCCCCAGACCATAACAAAGAACCTAAAGAGAAGGGATCCCCAGGGCAGAATGA 1013
Query 951 TCAAGAGCTGAAATGCAGCGTT---------------------------------------------------- 972
||||||||||||||||||||||
Sbjct 1014 TCAAGAGCTGAAATGCAGCGTTTAAGAGACATGTCCAGTGGCCTTTGGAAAGGTGGTGGGGATCCAGTTCAGGA 1087
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1088 GGGAGGGGTATGTTTGTCTCCCAGTCTGGGCAAAGGAGTGCTATGCGGAATTCTCTGCATAGCAGAAAAGCTCC 1161
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1162 CACCATTTTCTTTTGATGTGGTTTTAAAGTCTCACGTTCTCTATAATAGAAACAGCAGGTCTTGTCAGCTCCTT 1235
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1236 GTGTGGCTGATGTGTCTGGAAATGATGTAGTTCAGGAAAGCATTTTTTTTTTCTTTGAACCTTAAAGGTTCTAT 1309
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1310 TATTAAAAGCAGCACAGATTCCACATTTTTATACATGAGGATCTTCTTTGTGGTGAATACCAGGATTGACTGCA 1383
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1384 TCCCTTTAAAGAAGTTTTATGTCCCTGACTCTGGCTAAAATTATCTAATTTCCAGATGCTTTTGTAGATGACTG 1457
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1458 AAGTATTTGTGAGCCACATATTGGGAGTTCTAGATTTGAGTGAATGGCAGGAAAGGGCCATCTCCATTGAGATG 1531
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1532 ATTAAGTGAACCAAACTAGTTCTCAGAATTCTACAGAGAAGGAGGGAATCAGACTGAGGAAGCTGTGACATAGG 1605
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1606 ACTTGAAGACCAAAGACTTTGAAATTTGCGAGCTGCTCATGTGTGAGTTATTATCACTGCTGTCTTTCTATTGA 1679
Query 973 -------------------------------------------------------------------------- 972
Sbjct 1680 GTTACAAATCTATATTTTTATTGAAGTTTAAATAAAGAAAAAATTTACAAGAGCCTCTTTGATCCTTAAAAAAA 1753
Query 973 -------------------- 972
Sbjct 1754 AAAAAAAAAAAAAAAAAAAA 1773
