Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12140
- Subject:
- NM_001372092.1
- Aligned Length:
- 4053
- Identities:
- 470
- Gaps:
- 3582
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGAGATAGAAAATGCTGCTGAAGAACCTAGAGTCTTATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTATACAAGATACTACTAATTCAAAGACAGTGAATGAACGGATCACTTTAAATTTACCAGCATCTACTCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGAAAGCTCTTTGAAGATGTGGCCAACAAAGTAGGCTACATAAATGGAACCTTTGACTTGGTGTGGGGAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAATCAATACTGCTGATATGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAAAGAAGAACTTTCTGCATTTGACAGATAAAGATGGTGAACAACCTCAAATACTGCTGGAGGATTCCAGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGGAAGACAGTGTTCATGACAGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGGGGTTCTACCAGTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATGTCAGCCAAAGCTACTCCTACTCATCTATTTTGAATAAATCAGAAACTGGATATGTGGGACTAGTAAACCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCAATGACTTGCTATTTGAATAGCCTTTTGCAAACACTTTTTATGACTCCTGAATTTAGGAATGCATTATATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTGGGAATTTGAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCATACCAACTTCAAAGGCTTTTTGTTTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTACAAACCAGCAAAAAGAGAGCAATTGAAACCACAGATGTTACAAGGAGCTTTGGATGGGATAGTAGTGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGGCAGCAGCATGATGTACAAGAACTATGCAGAGTCATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACAGGCTGATCTTATAAATGAGCTATATCAAGGCAAGCTGAAGGACTACGTGAGATGTCTGGAATGTGGTTAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGGCTGGCGAATCGACACATATCTTGATATTCCATTGGTCATCCGACCTTATGGGTCCAGCCAAGCATTTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAGTGTGGAAGAAGCATTGCATGCATTTATTCAGCCAGAGATTCTGGATGGCCCAAATCAGTATTTTTGTGAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTGTAAGAAGAAGTGTGATGCACGGAAGGGCCTTCGGTTTTTGCATTTTCCTTATCTGCTGACCTTACAGCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAAGATTCGATTTTGATTATACAACCATGCATAGGATTAAACTGAATGATCGAATGACATTTCCCGAGGAACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGATATGAGTACTTTTATTGATGTTGAAGATGAGACTGAAAGTTGCACTGACAGTGGAGCAGAAAATGAAGGTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTTGTCACAGTGATCAGATGAGCAACGATTTCTCCAATGATGATGGTGTTGATGAAGGAATCTGTCTTGAAACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATAGTGGAACTGAAAAGATCTCAAAATCTGGACTTGAAAAGAATTCCTTGATCTATGAACTTTTCTCTGTTAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGTTCATTCTGGGAGCGCTGCTGGTGGTCATTATTATGCATGTATAAAGTCATTCAGTGATGAGCAGTGGTACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GCTTCAATGATCAACATGTCAGCAGGATAACACAAGAGGACATTAAGAAAACACATGGTGGATCTTCAGGAAGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAGGATATTATTCTAGTGCTTTCGCAAGTTCCACAAATGCATATATGCTGATCTATAGACTGAAGGATCCAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGAAATGCAAAATTTCTAGAAGTGGATGAATACCCAGAACATATTAAAAACTTGGTGCAGAAAGAGAGAGAGT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGAAGAACAAGAAAAGAGACAACGAGAAATTGAGCGCAATACATGCAAGATAAAATTATTCTGTTTGCATCCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACAAAACAAGTAATGATGGAAAATAAATTGGAGGTTCATAAGGATAAGACATTAAAGGAAGCAGTAGAAATGGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTATAAGATGATGGATTTAGAAGAGGTAATACCCCTGGATTGCTGTCGCCTTGTTAAATATGATGAGTTTCATG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATTATCTAGAACGGTCATATGAAGGAGAAGAAGATACACCAATGGGGCTTCTACTAGGTGGCGTCAAGTCAACA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TATATGTTTGATCTGCTGTTGGAGACGAGAAAGCCTGATCAGGTTTTCCAATCTTATAAACCTGGAGAAGTGAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGTGAAAGTTCATGTTGTTGATCTAAAGGCAGAATCTGTAGCTGCTCCTATAACTGTTCGTGCTTACTTAAATC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGACAGTTACAGAATTCAAACAACTGATTTCAAAGGCCATCCATTTACCTGCTGAAACAATGAGAATAGTGCTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAACGCTGCTACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAAAACCCTGAAAGCTGAAGGATTTTTTAGAAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAACAAGGTGTTTGTTGAAAGCTCCGAGACTTTGGATTACCAGATGGCCTTTGCAGACTCTCATTTATGGAAAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCTGGATCGGCATGCAAATACAATCAGATTATTTGTTTTGCTACCTGAACAATCCCCAGTATCTTATTCCAAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGGACAGCATACCAGAAAGCTGGAGGCGATTCTGGTAATGTGGATGATGACTGTGAAAGAGTCAAAGGACCTGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGGAAGCCTAAAGTCTGTGGAAGCTATTCTAGAAGAAAGCACTGAAAAACTCAAAAGCTTGTCACTGCAGCAAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGCAGGATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGACAAGTGACTTTGAAAACATCGAATCACCTCTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATGAGAGGGACTCTTCAGCATCAGTGGATAATAGAGAACTTGAACAGCATATTCAGACTTCTGATCCAGAAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTTCAGTCTGAAGAACGATCAGACTCAGATGTGAATAATGACAGGAGTACAAGTTCAGTGGACAGTGATATTC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTAGCTCCAGTCATAGCAGTGATACTTTGTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAATGGACTTGAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TCTCACAGTATCACAAGTAGTAGAAGAACGAAAGCAAATGAAGGGAAAAAAGAAACATGGGATACAGCAGAAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGACTCTGGAACTGATAGTGAATATGATGAGAGTGGCAAGAGTAGGGGAGAAATGCAGTACATGTATTTCAAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGAACCTTATGCTGCAGATGAAGGTTCTGGGGAAGGACATAAATGGTTGATGGTGCATGTTGATAAAAGAATT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACTCTGGCAGCTTTCAAACAACATTTAGAGCCCTTTGTTGGAGTTTTGTCCTCTCACTTCAAGGTCTTTCGAGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTATGCCAGCAATCAAGAGTTTGAGAGCGTCCGGCTGAATGAGACACTTTCATCATTTTCTGATGACAATAAGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTACAATTAGACTGGGGAGAGCACTTAAAAAAGGAGAATACAGAGTTAAAGTATACCAGCTTTTGGTCAATGAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CAAGAGCCATGCAAGTTTCTGCTAGATGCTGTGTTTGCTAAAGGAATGACTGTACGGCAATCAAAAGAGGAATT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AATTCCTCAGCTCAGGGAGCAATGTGGTTTAGAGCTCAGTATTGACAGGTTTCGTCTAAGGAAAAAAACATGGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGAATCCTGGCACTGTCTTTTTGGATTATCATATTTATGAAGAAGATATTAATATTTCCAGCAACTGGGAGGTT 3552
Query 1 ------------------------------ATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGAA 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TTCCTTGAAGTTCTTGATGGGGTAGAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGAA 3626
Query 45 GCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATTGCGAGAGA 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 GCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATTGCGAGAGA 3700
Query 119 AGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATTTCCCTGTGAT 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 AGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATTTCCCTGTGAT 3774
Query 193 ATTTCTGTCCTTGATATTCATCAAGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGGCCTCTTTA 266
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 ATTTCTGTCCTTGATATTCATCAGGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGGCCTCTTTA 3848
Query 267 TATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACAGATGAGCAAA 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 TATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACAGATGAGCAAA 3922
Query 341 GAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTCACCTCGTAAA 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 GAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTCACCTCGTAAA 3996
Query 415 GAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 GAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 4053
