Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12140
- Subject:
- NM_001372097.1
- Aligned Length:
- 3933
- Identities:
- 470
- Gaps:
- 3462
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGAGATAGAAAATGCTGCTGAAGAACCTAGAGTCTTATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTATACAAGATACTACTAATTCAAAGACAGTGAATGAACGGATCACTTTAAATTTACCAGCATCTACTCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGAAAGCTCTTTGAAGATGTGGCCAACAAAGTAGGCTACATAAATGGAACCTTTGACTTGGTGTGGGGAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAATCAATACTGCTGATATGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAAAGAAGAACTTTCTGCATTTGACAGATAAAGATGGTGAACAACCTCAAATACTGCTGGAGGATTCCAGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGGAAGACAGTGTTCATGACAGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGGGGTTCTACCAGTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATGTCAGCCAAAGCTACTCCTACTCATCTATTTTGAATAAATCAGAAACTGGATATGTGGGACTAGTAAACCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCAATGACTTGCTATTTGAATAGCCTTTTGCAAACACTTTTTATGACTCCTGAATTTAGGAATGCATTATATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTGGGAATTTGAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCATACCAACTTCAAAGGCTTTTTGTTTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTACAAACCAGCAAAAAGAGAGCAATTGAAACCACAGATGTTACAAGGAGCTTTGGATGGGATAGTAGTGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGGCAGCAGCATGATGTACAAGAACTATGCAGAGTCATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACAGGCTGATCTTATAAATGAGCTATATCAAGGCAAGCTGAAGGACTACGTGAGATGTCTGGAATGTGGTTAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGGCTGGCGAATCGACACATATCTTGATATTCCATTGGTCATCCGACCTTATGGGTCCAGCCAAGCATTTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAGTGTGGAAGAAGCATTGCATGCATTTATTCAGCCAGAGATTCTGGATGGCCCAAATCAGTATTTTTGTGAAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTTGTAAGAAGAAGTGTGATGCACGGAAGGGCCTTCGGTTTTTGCATTTTCCTTATCTGCTGACCTTACAGCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAAGATTCGATTTTGATTATACAACCATGCATAGGATTAAACTGAATGATCGAATGACATTTCCCGAGGAACT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGATATGAGTACTTTTATTGATGTTGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCACTGACAGTGGAGCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAATGAAGGTAGTTGTCACAGTGATCAGATGAGCAACGATTTCTCCAATGATGATGGTGTTGATGAAGGAATC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGTCTTGAAACCAATAGTGGAACTGAAAAGATCTCAAAATCTGGACTTGAAAAGATAACACAAGAGGACATTAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAAACACATGGTGGATCTTCAGGAAGCAGAGGATATTATTCTAGTGCTTTCGCAAGTTCCACAAATGCATATA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGCTGATCTATAGACTGAAGGATCCAGCCAGAAATGCAAAATTTCTAGAAGTGGATGAATACCCAGAACATATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAAACTTGGTGCAGAAAGAGAGAGAGTTGGAAGAACAAGAAAAGAGACAACGAGAAATTGAGCGCAATACATG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAGATAAAATTATTCTGTTTGCATCCTACAAAACAAGTAATGATGGAAAATAAATTGGAGGTTCATAAGGATA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGACATTAAAGGAAGCAGTAGAAATGGCTTATAAGATGATGGATTTAGAAGAGGTAATACCCCTGGATTGCTGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CGCCTTGTTAAATATGATGAGTTTCATGATTATCTAGAACGGTCATATGAAGGAGAAGAAGATACACCAATGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTTCTACTAGGTGGCGTCAAGTCAACATATATGTTTGATCTGCTGTTGGAGACGAGAAAGCCTGATCAGGTTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TCCAATCTTATAAACCTGGAGAAGTGATGGTGAAAGTTCATGTTGTTGATCTAAAGGCAGAATCTGTAGCTGCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTATAACTGTTCGTGCTTACTTAAATCAGACAGTTACAGAATTCAAACAACTGATTTCAAAGGCCATCCATTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACCTGCTGAAACAATGAGAATAGTGCTGGAACGCTGCTACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAAAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCCTGAAAGCTGAAGGATTTTTTAGAAGTAACAAGGTGTTTGTTGAAAGCTCCGAGACTTTGGATTACCAGATG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCCTTTGCAGACTCTCATTTATGGAAACTCCTGGATCGGCATGCAAATACAATCAGATTATTTGTTTTGCTACC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGAACAATCCCCAGTATCTTATTCCAAAAGGACAGCATACCAGAAAGCTGGAGGCGATTCTGGTAATGTGGATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATGACTGTGAAAGAGTCAAAGGACCTGTAGGAAGCCTAAAGTCTGTGGAAGCTATTCTAGAAGAAAGCACTGAA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AAACTCAAAAGCTTGTCACTGCAGCAACAGCAGGATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGACAAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGACTTTGAAAACATCGAATCACCTCTCAATGAGAGGGACTCTTCAGCATCAGTGGATAATAGAGAACTTGAAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGCATATTCAGACTTCTGATCCAGAAAATTTTCAGTCTGAAGAACGATCAGACTCAGATGTGAATAATGACAGG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGTACAAGTTCAGTGGACAGTGATATTCTTAGCTCCAGTCATAGCAGTGATACTTTGTGCAATGCAGACAATGC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCAGATCCCTTTGGCTAATGGACTTGACTCTCACAGTATCACAAGTAGTAGAAGAACGAAAGCAAATGAAGGGA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAAAAGAAACATGGGATACAGCAGAAGAAGACTCTGGAACTGATAGTGAATATGATGAGAGTGGCAAGAGTAGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GGAGAAATGCAGTACATGTATTTCAAAGCTGAACCTTATGCTGCAGATGAAGGTTCTGGGGAAGGACATAAATG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTTGATGGTGCATGTTGATAAAAGAATTACTCTGGCAGCTTTCAAACAACATTTAGAGCCCTTTGTTGGAGTTT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TGTCCTCTCACTTCAAGGTCTTTCGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGTCCGGCTGAATGAGACA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTTTCATCATTTTCTGATGACAATAAGATTACAATTAGACTGGGGAGAGCACTTAAAAAAGGAGAATACAGAGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TAAAGTATACCAGCTTTTGGTCAATGAACAAGAGCCATGCAAGTTTCTGCTAGATGCTGTGTTTGCTAAAGGAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGACTGTACGGCAATCAAAAGAGGAATTAATTCCTCAGCTCAGGGAGCAATGTGGTTTAGAGCTCAGTATTGAC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGGTTTCGTCTAAGGAAAAAAACATGGAAGAATCCTGGCACTGTCTTTTTGGATTATCATATTTATGAAGAAGA 3404
Query 1 ----------------------------------------------------------ATGAAGTCCATGTCAC 16
||||||||||||||||
Sbjct 3405 TATTAATATTTCCAGCAACTGGGAGGTTTTCCTTGAAGTTCTTGATGGGGTAGAGAAGATGAAGTCCATGTCAC 3478
Query 17 AGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAA 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 AGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAA 3552
Query 91 AGCAGTAGTGTGGACGAATTGCGAGAGAAGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGC 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 AGCAGTAGTGTGGACGAATTGCGAGAGAAGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGC 3626
Query 165 TAAGGGTAGAGGAACATTTCCCTGTGATATTTCTGTCCTTGATATTCATCAAGATTTAGACTGGAATCCTAAAG 238
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 3627 TAAGGGTAGAGGAACATTTCCCTGTGATATTTCTGTCCTTGATATTCATCAGGATTTAGACTGGAATCCTAAAG 3700
Query 239 TTTCTACCCTGAATGTCTGGCCTCTTTATATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAA 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 TTTCTACCCTGAATGTCTGGCCTCTTTATATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAA 3774
Query 313 GAATTAATGGAATTGACAGATGAGCAAAGAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGG 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GAATTAATGGAATTGACAGATGAGCAAAGAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGG 3848
Query 387 ACATCGTGTAACATACTCACCTCGTAAAGAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATC 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 ACATCGTGTAACATACTCACCTCGTAAAGAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATC 3922
Query 461 TGACTCAAGAC 471
|||||||||||
Sbjct 3923 TGACTCAAGAC 3933
