Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12140
- Subject:
- NM_001372098.1
- Aligned Length:
- 3915
- Identities:
- 470
- Gaps:
- 3444
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAAGAGATAGAAAATGCTGCTGAAGAACCTAGAGTCTTATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTATACAAGATACTACTAATTCAAAGACAGTGAATGAACGGATCACTTTAAATTTACCAGCATCTACTCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGAAAGCTCTTTGAAGATGTGGCCAACAAAGTAGGCTACATAAATGGAACCTTTGACTTGGTGTGGGGAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAATCAATACTGCTGATATGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGAAAGAAGAACTTTCTGCATTTGACAGATAAAGATGGTGAACAACCTCAAATACTGCTGGAGGATTCCAGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGGAAGACAGTGTTCATGACAGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGGGGTTCTACCAGTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATGTCAGCCAAAGCTACTCCTACTCATCTATTTTGAATAAATCAGAAACTGGATATGTGGGACTAGTAAACCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCAATGACTTGCTATTTGAATAGCCTTTTGCAAACACTTTTTATGACTCCTGAATTTAGGAATGCATTATATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGTGGGAATTTGAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCATACCAACTTCAAAGGCTTTTTGTTTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTACAAACCAGCAAAAAGAGAGCAATTGAAACCACAGATGTTACAAGGAGCTTTGGATGGGATAGTAGTGAGGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGGCAGCAGCATGATGTACAAGAACTATGCAGAGTCATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACAGGAAGAAGCATTGCATGCATTTATTCAGCCAGAGATTCTGGATGGCCCAAATCAGTATTTTTGTGAACGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTAAGAAGAAGTGTGATGCACGGAAGGGCCTTCGGTTTTTGCATTTTCCTTATCTGCTGACCTTACAGCTGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAGATTCGATTTTGATTATACAACCATGCATAGGATTAAACTGAATGATCGAATGACATTTCCCGAGGAACTAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATATGAGTACTTTTATTGATGTTGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCACTGACAGTGGAGCAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGAAGGTAGTTGTCACAGTGATCAGATGAGCAACGATTTCTCCAATGATGATGGTGTTGATGAAGGAATCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTTGAAACCAATAGTGGAACTGAAAAGATCTCAAAATCTGGACTTGAAAAGAATTCCTTGATCTATGAACTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTCTGTTATGGTTCATTCTGGGAGCGCTGCTGGTGGTCATTATTATGCATGTATAAAGTCATTCAGTGATGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAGTGGTACAGCTTCAATGATCAACATGTCAGCAGGATAACACAAGAGGACATTAAGAAAACACATGGTGGATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTCAGGAAGCAGAGGATATTATTCTAGTGCTTTCGCAAGTTCCACAAATGCATATATGCTGATCTATAGACTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGATCCAGCCAGAAATGCAAAATTTCTAGAAGTGGATGAATACCCAGAACATATTAAAAACTTGGTGCAGAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGAGAGAGTTGGAAGAACAAGAAAAGAGACAACGAGAAATTGAGCGCAATACATGCAAGATAAAATTATTCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTGCATCCTACAAAACAAGTAATGATGGAAAATAAATTGGAGGTTCATAAGGATAAGACATTAAAGGAAGCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TAGAAATGGCTTATAAGATGATGGATTTAGAAGAGGTAATACCCCTGGATTGCTGTCGCCTTGTTAAATATGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGTTTCATGATTATCTAGAACGGTCATATGAAGGAGAAGAAGATACACCAATGGGGCTTCTACTAGGTGGCGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAAGTCAACATATATGTTTGATCTGCTGTTGGAGACGAGAAAGCCTGATCAGGTTTTCCAATCTTATAAACCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAGAAGTGATGGTGAAAGTTCATGTTGTTGATCTAAAGGCAGAATCTGTAGCTGCTCCTATAACTGTTCGTGCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TACTTAAATCAGACAGTTACAGAATTCAAACAACTGATTTCAAAGGCCATCCATTTACCTGCTGAAACAATGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATAGTGCTGGAACGCTGCTACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAAAACCCTGAAAGCTGAAGGAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTTTAGAAGTAACAAGGTGTTTGTTGAAAGCTCCGAGACTTTGGATTACCAGATGGCCTTTGCAGACTCTCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTATGGAAACTCCTGGATCGGCATGCAAATACAATCAGATTATTTGTTTTGCTACCTGAACAATCCCCAGTATC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTATTCCAAAAGGACAGCATACCAGAAAGCTGGAGGCGATTCTGGTAATGTGGATGATGACTGTGAAAGAGTCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAGGACCTGTAGGAAGCCTAAAGTCTGTGGAAGCTATTCTAGAAGAAAGCACTGAAAAACTCAAAAGCTTGTCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTGCAGCAACAGCAGGATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGACAAGTGACTTTGAAAACATCGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATCACCTCTCAATGAGAGGGACTCTTCAGCATCAGTGGATAATAGAGAACTTGAACAGCATATTCAGACTTCTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATCCAGAAAATTTTCAGTCTGAAGAACGATCAGACTCAGATGTGAATAATGACAGGAGTACAAGTTCAGTGGAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGTGATATTCTTAGCTCCAGTCATAGCAGTGATACTTTGTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGGACTTGACTCTCACAGTATCACAAGTAGTAGAAGAACGAAAGCAAATGAAGGGAAAAAAGAAACATGGGATA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGCAGAAGAAGACTCTGGAACTGATAGTGAATATGATGAGAGTGGCAAGAGTAGGGGAGAAATGCAGTACATG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TATTTCAAAGCTGAACCTTATGCTGCAGATGAAGGTTCTGGGGAAGGACATAAATGGTTGATGGTGCATGTTGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAAAAGAATTACTCTGGCAGCTTTCAAACAACATTTAGAGCCCTTTGTTGGAGTTTTGTCCTCTCACTTCAAGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCTTTCGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGTCCGGCTGAATGAGACACTTTCATCATTTTCTGAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GACAATAAGATTACAATTAGACTGGGGAGAGCACTTAAAAAAGGAGAATACAGAGTTAAAGTATACCAGCTTTT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGTCAATGAACAAGAGCCATGCAAGTTTCTGCTAGATGCTGTGTTTGCTAAAGGAATGACTGTACGGCAATCAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAGAGGAATTAATTCCTCAGCTCAGGGAGCAATGTGGTTTAGAGCTCAGTATTGACAGGTTTCGTCTAAGGAAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAAACATGGAAGAATCCTGGCACTGTCTTTTTGGATTATCATATTTATGAAGAAGATATTAATATTTCCAGCAA 3404
Query 1 ----------------------------------------ATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAA 34
||||||||||||||||||||||||||||||||||
Sbjct 3405 CTGGGAGGTTTTCCTTGAAGTTCTTGATGGGGTAGAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAA 3478
Query 35 GACGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAA 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 GACGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAA 3552
Query 109 TTGCGAGAGAAGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATT 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TTGCGAGAGAAGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATT 3626
Query 183 TCCCTGTGATATTTCTGTCCTTGATATTCATCAAGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCT 256
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 TCCCTGTGATATTTCTGTCCTTGATATTCATCAGGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCT 3700
Query 257 GGCCTCTTTATATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACA 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 GGCCTCTTTATATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACA 3774
Query 331 GATGAGCAAAGAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTC 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GATGAGCAAAGAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTC 3848
Query 405 ACCTCGTAAAGAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 ACCTCGTAAAGAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 3915
