Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12140
- Subject:
- NM_001372100.1
- Aligned Length:
- 3825
- Identities:
- 470
- Gaps:
- 3354
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCACCACTGGATCATACCAGTGACAAGTCACTTCTCGACGCTAATTTTGAGCCAGGAAAGAAGAACTTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCATTTGACAGATAAAGATGGTGAACAACCTCAAATACTGCTGGAGGATTCCAGTGCTGGGGAAGACAGTGTTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGACAGGTTTATAGGTCCGCTTCCAAGAGAAGGTTCTGGGGGTTCTACCAGTGATTATGTCAGCCAAAGCTAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCTACTCATCTATTTTGAATAAATCAGAAACTGGATATGTGGGACTAGTAAACCAAGCAATGACTTGCTATTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAATAGCCTTTTGCAAACACTTTTTATGACTCCTGAATTTAGGAATGCATTATATAAGTGGGAATTTGAAGAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGAAGAAGATCCAGTGACAAGTATTCCATACCAACTTCAAAGGCTTTTTGTTTTGTTACAAACCAGCAAAAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAGCAATTGAAACCACAGATGTTACAAGGAGCTTTGGATGGGATAGTAGTGAGGCTTGGCAGCAGCATGATGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAAGAACTATGCAGAGTCATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAGAACAGGCTGATCTTATAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGAGCTATATCAAGGCAAGCTGAAGGACTACGTGAGATGTCTGGAATGTGGTTATGAGGGCTGGCGAATCGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACATATCTTGATATTCCATTGGTCATCCGACCTTATGGGTCCAGCCAAGCATTTGCTAGTGTGGAAGAAGCATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCATGCATTTATTCAGCCAGAGATTCTGGATGGCCCAAATCAGTATTTTTGTGAACGTTGTAAGAAGAAGTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGCACGGAAGGGCCTTCGGTTTTTGCATTTTCCTTATCTGCTGACCTTACAGCTGAAAAGATTCGATTTTGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATACAACCATGCATAGGATTAAACTGAATGATCGAATGACATTTCCCGAGGAACTAGATATGAGTACTTTTAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGATGTTGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCACTGACAGTGGAGCAGAAAATGAAGGTAGTTGTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACAGTGATCAGATGAGCAACGATTTCTCCAATGATGATGGTGTTGATGAAGGAATCTGTCTTGAAACCAATAGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGAACTGAAAAGATCTCAAAATCTGGACTTGAAAAGAATTCCTTGATCTATGAACTTTTCTCTGTTATGGTTCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCTGGGAGCGCTGCTGGTGGTCATTATTATGCATGTATAAAGTCATTCAGTGATGAGCAGTGGTACAGCTTCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGATCAACATGTCAGCAGGATAACACAAGAGGACATTAAGAAAACACATGGTGGATCTTCAGGAAGCAGAGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATTATTCTAGTGCTTTCGCAAGTTCCACAAATGCATATATGCTGATCTATAGACTGAAGGATCCAGCCAGAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGCAAAATTTCTAGAAGTGGATGAATACCCAGAACATATTAAAAACTTGGTGCAGAAAGAGAGAGAGTTGGAAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACAAGAAAAGAGACAACGAGAAATTGAGCGCAATACATGCAAGATAAAATTATTCTGTTTGCATCCTACAAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAAGTAATGATGGAAAATAAATTGGAGGTTCATAAGGATAAGACATTAAAGGAAGCAGTAGAAATGGCTTATAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GATGATGGATTTAGAAGAGGTAATACCCCTGGATTGCTGTCGCCTTGTTAAATATGATGAGTTTCATGATTATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TAGAACGGTCATATGAAGGAGAAGAAGATACACCAATGGGGCTTCTACTAGGTGGCGTCAAGTCAACATATATG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTGATCTGCTGTTGGAGACGAGAAAGCCTGATCAGGTTTTCCAATCTTATAAACCTGGAGAAGTGATGGTGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGTTCATGTTGTTGATCTAAAGGCAGAATCTGTAGCTGCTCCTATAACTGTTCGTGCTTACTTAAATCAGACAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTACAGAATTCAAACAACTGATTTCAAAGGCCATCCATTTACCTGCTGAAACAATGAGAATAGTGCTGGAACGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGCTACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAAAACCCTGAAAGCTGAAGGATTTTTTAGAAGTAACAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGTGTTTGTTGAAAGCTCCGAGACTTTGGATTACCAGATGGCCTTTGCAGACTCTCATTTATGGAAACTCCTGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATCGGCATGCAAATACAATCAGATTATTTGTTTTGCTACCTGAACAATCCCCAGTATCTTATTCCAAAAGGACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCATACCAGAAAGCTGGAGGCGATTCTGGTAATGTGGATGATGACTGTGAAAGAGTCAAAGGACCTGTAGGAAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CCTAAAGTCTGTGGAAGCTATTCTAGAAGAAAGCACTGAAAAACTCAAAAGCTTGTCACTGCAGCAACAGCAGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGACAAGTGACTTTGAAAACATCGAATCACCTCTCAATGAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGGGACTCTTCAGCATCAGTGGATAATAGAGAACTTGAACAGCATATTCAGACTTCTGATCCAGAAAATTTTCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTCTGAAGAACGATCAGACTCAGATGTGAATAATGACAGGAGTACAAGTTCAGTGGACAGTGATATTCTTAGCT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCAGTCATAGCAGTGATACTTTGTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAATGGACTTGACTCTCAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGTATCACAAGTAGTAGAAGAACGAAAGCAAATGAAGGGAAAAAAGAAACATGGGATACAGCAGAAGAAGACTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGGAACTGATAGTGAATATGATGAGAGTGGCAAGAGTAGGGGAGAAATGCAGTACATGTATTTCAAAGCTGAAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTATGCTGCAGATGAAGGTTCTGGGGAAGGACATAAATGGTTGATGGTGCATGTTGATAAAAGAATTACTCTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCAGCTTTCAAACAACATTTAGAGCCCTTTGTTGGAGTTTTGTCCTCTCACTTCAAGGTCTTTCGAGTGTATGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAGCAATCAAGAGTTTGAGAGCGTCCGGCTGAATGAGACACTTTCATCATTTTCTGATGACAATAAGATTACAA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTAGACTGGGGAGAGCACTTAAAAAAGGAGAATACAGAGTTAAAGTATACCAGCTTTTGGTCAATGAACAAGAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCATGCAAGTTTCTGCTAGATGCTGTGTTTGCTAAAGGAATGACTGTACGGCAATCAAAAGAGGAATTAATTCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TCAGCTCAGGGAGCAATGTGGTTTAGAGCTCAGTATTGACAGGTTTCGTCTAAGGAAAAAAACATGGAAGAATC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CTGGCACTGTCTTTTTGGATTATCATATTTATGAAGAAGATATTAATATTTCCAGCAACTGGGAGGTTTTCCTT 3330
Query 1 ------------------------ATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTTC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 GAAGTTCTTGATGGGGTAGAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTTC 3404
Query 51 AGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATTGCGAGAGAAGCTTA 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 AGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATTGCGAGAGAAGCTTA 3478
Query 125 GTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATTTCCCTGTGATATTTCT 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 GTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATTTCCCTGTGATATTTCT 3552
Query 199 GTCCTTGATATTCATCAAGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGGCCTCTTTATATCTG 272
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 GTCCTTGATATTCATCAGGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGGCCTCTTTATATCTG 3626
Query 273 TGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACAGATGAGCAAAGAAATG 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 TGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACAGATGAGCAAAGAAATG 3700
Query 347 AACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTCACCTCGTAAAGAGAAA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 AACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTCACCTCGTAAAGAGAAA 3774
Query 421 GCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 GCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 3825
