Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12140
- Subject:
- NM_001372102.1
- Aligned Length:
- 3543
- Identities:
- 470
- Gaps:
- 3072
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACTTGCTATTTGAATAGCCTTTTGCAAACACTTTTTATGACTCCTGAATTTAGGAATGCATTATATAAGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAATTTGAAGAATCTGAAGAAGATCCAGTGACAAGTATTCCATACCAACTTCAAAGGCTTTTTGTTTTGTTAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAACCAGCAAAAAGAGAGCAATTGAAACCACAGATGTTACAAGGAGCTTTGGATGGGATAGTAGTGAGGCTTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGCAGCATGATGTACAAGAACTATGCAGAGTCATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAGAACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTGATCTTATAAATGAGCTATATCAAGGCAAGCTGAAGGACTACGTGAGATGTCTGGAATGTGGTTATGAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGGCGAATCGACACATATCTTGATATTCCATTGGTCATCCGACCTTATGGGTCCAGCCAAGCATTTGCTAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGGAAGAAGCATTGCATGCATTTATTCAGCCAGAGATTCTGGATGGCCCAAATCAGTATTTTTGTGAACGTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAAGAAGAAGTGTGATGCACGGAAGGGCCTTCGGTTTTTGCATTTTCCTTATCTGCTGACCTTACAGCTGAAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATTCGATTTTGATTATACAACCATGCATAGGATTAAACTGAATGATCGAATGACATTTCCCGAGGAACTAGAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGAGTACTTTTATTGATGTTGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCACTGACAGTGGAGCAGAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGAAGGTAGTTGTCACAGTGATCAGATGAGCAACGATTTCTCCAATGATGATGGTGTTGATGAAGGAATCTGTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGAAACCAATAGTGGAACTGAAAAGATCTCAAAATCTGGACTTGAAAAGAATTCCTTGATCTATGAACTTTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTGTTATGGTTCATTCTGGGAGCGCTGCTGGTGGTCATTATTATGCATGTATAAAGTCATTCAGTGATGAGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTGGTACAGCTTCAATGATCAACATGTCAGCAGGATAACACAAGAGGACATTAAGAAAACACATGGTGGATCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGAAGCAGAGGATATTATTCTAGTGCTTTCGCAAGTTCCACAAATGCATATATGCTGATCTATAGACTGAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATCCAGCCAGAAATGCAAAATTTCTAGAAGTGGATGAATACCCAGAACATATTAAAAACTTGGTGCAGAAAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGAGAGTTGGAAGAACAAGAAAAGAGACAACGAGAAATTGAGCGCAATACATGCAAGATAAAATTATTCTGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCATCCTACAAAACAAGTAATGATGGAAAATAAATTGGAGGTTCATAAGGATAAGACATTAAAGGAAGCAGTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAATGGCTTATAAGATGATGGATTTAGAAGAGGTAATACCCCTGGATTGCTGTCGCCTTGTTAAATATGATGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTTTCATGATTATCTAGAACGGTCATATGAAGGAGAAGAAGATACACCAATGGGGCTTCTACTAGGTGGCGTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTCAACATATATGTTTGATCTGCTGTTGGAGACGAGAAAGCCTGATCAGGTTTTCCAATCTTATAAACCTGGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAAGTGATGGTGAAAGTTCATGTTGTTGATCTAAAGGCAGAATCTGTAGCTGCTCCTATAACTGTTCGTGCTTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTTAAATCAGACAGTTACAGAATTCAAACAACTGATTTCAAAGGCCATCCATTTACCTGCTGAAACAATGAGAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TAGTGCTGGAACGCTGCTACAATGATTTGCGTCTTCTCAGTGTCTCCAGTAAAACCCTGAAAGCTGAAGGATTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTAGAAGTAACAAGGTGTTTGTTGAAAGCTCCGAGACTTTGGATTACCAGATGGCCTTTGCAGACTCTCATTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATGGAAACTCCTGGATCGGCATGCAAATACAATCAGATTATTTGTTTTGCTACCTGAACAATCCCCAGTATCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATTCCAAAAGGACAGCATACCAGAAAGCTGGAGGCGATTCTGGTAATGTGGATGATGACTGTGAAAGAGTCAAA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGACCTGTAGGAAGCCTAAAGTCTGTGGAAGCTATTCTAGAAGAAAGCACTGAAAAACTCAAAAGCTTGTCACT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCAGCAACAGCAGGATGGAGATAATGGGGACAGCAGCAAAAGTACTGAGACAAGTGACTTTGAAAACATCGAAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CACCTCTCAATGAGAGGGACTCTTCAGCATCAGTGGATAATAGAGAACTTGAACAGCATATTCAGACTTCTGAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCAGAAAATTTTCAGTCTGAAGAACGATCAGACTCAGATGTGAATAATGACAGGAGTACAAGTTCAGTGGACAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGATATTCTTAGCTCCAGTCATAGCAGTGATACTTTGTGCAATGCAGACAATGCTCAGATCCCTTTGGCTAATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GACTTGACTCTCACAGTATCACAAGTAGTAGAAGAACGAAAGCAAATGAAGGGAAAAAAGAAACATGGGATACA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCAGAAGAAGACTCTGGAACTGATAGTGAATATGATGAGAGTGGCAAGAGTAGGGGAGAAATGCAGTACATGTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTCAAAGCTGAACCTTATGCTGCAGATGAAGGTTCTGGGGAAGGACATAAATGGTTGATGGTGCATGTTGATA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAAGAATTACTCTGGCAGCTTTCAAACAACATTTAGAGCCCTTTGTTGGAGTTTTGTCCTCTCACTTCAAGGTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTCGAGTGTATGCCAGCAATCAAGAGTTTGAGAGCGTCCGGCTGAATGAGACACTTTCATCATTTTCTGATGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAATAAGATTACAATTAGACTGGGGAGAGCACTTAAAAAAGGAGAATACAGAGTTAAAGTATACCAGCTTTTGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCAATGAACAAGAGCCATGCAAGTTTCTGCTAGATGCTGTGTTTGCTAAAGGAATGACTGTACGGCAATCAAAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAGGAATTAATTCCTCAGCTCAGGGAGCAATGTGGTTTAGAGCTCAGTATTGACAGGTTTCGTCTAAGGAAAAA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AACATGGAAGAATCCTGGCACTGTCTTTTTGGATTATCATATTTATGAAGAAGATATTAATATTTCCAGCAACT 3034
Query 1 --------------------------------------ATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGA 36
||||||||||||||||||||||||||||||||||||
Sbjct 3035 GGGAGGTTTTCCTTGAAGTTCTTGATGGGGTAGAGAAGATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGA 3108
Query 37 CGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATT 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CGGTGGAAGCCTTCAGAGATGAAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATT 3182
Query 111 GCGAGAGAAGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATTTC 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GCGAGAGAAGCTTAGTGAAATCAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATTTC 3256
Query 185 CCTGTGATATTTCTGTCCTTGATATTCATCAAGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGG 258
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CCTGTGATATTTCTGTCCTTGATATTCATCAGGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGG 3330
Query 259 CCTCTTTATATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACAGA 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CCTCTTTATATCTGTGATGATGGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACAGA 3404
Query 333 TGAGCAAAGAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTCAC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 TGAGCAAAGAAATGAACTGATGAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTCAC 3478
Query 407 CTCGTAAAGAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 471
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CTCGTAAAGAGAAAGCACTAAAAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 3543
