Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12140
- Subject:
- XM_006508273.3
- Aligned Length:
- 4188
- Identities:
- 425
- Gaps:
- 3717
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTGCCCGGCGAGGAGAACCAACTGGTCCCGAAGGAGGATGTGTTTTGGAGATGCAGACAAAATATCTTTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAAATGAAGAAGAAATTTTTACAGATAGAAAATGCTGCTGAAGAACCTAGAGTCTTATGTATAATACAAGACA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTACTAACTCGAAGACAGTGAGTGAACGGATCACATTAAATTTACCAGCATCTACCCCAGTCCGAAAGCTCTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAAGATGTGGCCAACAAAGTAGGCTACATAAATGGAACCTTTGATTTGACCAGGGAAAATGGAGTCACTACTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGACATGGCACCACTGGATCACACCAGTGACAAGTCTCTTCTTGATGCTAATTTTGAGCCAGGAAAGAAGAACT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTGCATTTGACAGATAAAGATGGTGAACCGCCTCAGATGTTGTTGGAGGACTCCAATAACGTGGATGACAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGCATGACAGGTTCATAGGTCCACTGCCAAGAGAAGGTTCTGTGGCCTCTACCAATGATTATGTCAGCCAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTACTCCTATTCATCAATTTTGAACAAGTCAGAAACTGGTTATGTGGGATTAGTAAACCAGGCGATGACGTGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATTTGAATAGCCTTTTGCAAACACTTTTTATGACTCCTGAATTTAGGAATGCATTATATAAGTGGGAATTTGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GACTCTGAAGAAGATCCTGTAACGAGTATCCCATACCAGCTTCAAAGGCTTTTTGTTTTGTTACAAACCAGCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGAGAGCAATTGAGACCACAGATGTTACAAGGAGCTTTGGATGGGATAGCAGTGAGGCTTGGCAACAGCATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGTACAAGAACTGTGCCGTGTTATGTTTGATGCTTTGGAACAGAAATGGAAGCAAACAGAACAGGCTGATCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATAAATGAGCTGTACCAAGGCAAGCTGAAAGATTATGTGAGGTGTCTGGAATGCGGTTATGAAGGCTGGAGAAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGACACGTATCTTGATATTCCACTGGTCATCCGACCTTATGGGTCCAGCCAAGCGTTTGCTAGTGTGGAAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGTTGCATGCATTTATTCAACCAGAGATCTTGGATGGCCCAAATCAATATTTTTGTGAACGTTGTAAGAAGAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGTGATGCTCGGAAGGGCCTTCGGTTTTTGCATTTCCCCTATCTGCTGACCTTACAGTTGAAAAGGTTTGATTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGATTATACAACCATGCATAGAATTAAACTGAATGATCGAATGTCATTTCCGGAGGAGCTGGATATGAGCACAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTATTGATATTGAAGATGAGAAATCTCCTCAGACTGAAAGTTGCACTGATAGTGGAGCAGAAAATGAAGGCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCCACAGCGACCAGATGAGTAATGATTTCTCCACGGATGATGCTGTTGATGAAGGGATATGCCTGGAGAGCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TAGTGGGAGTGAGAAGATTTCAAAACCTGGCCTGGAAAAGGTAGAGATGGCGGAGACAGACCAGAGAAAGGATC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCATCCAATTCCAGCTTGGTGAACCAAACTCCCTGATGTATGAGCTCTTCTCAGTGATGGTGCATTCAGGGAGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCTGCTGGAGGACACTATTATGCTTGCATAAAGTCTTTCAGTGACGATCAATGGTACAGTTTCAATGACCAACA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTGAGCAGGATAACACAAGAAGACATTAAGAAGACACATGGTGGGTCTTCAGGAAGCAGAGGCTACTACTCCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGCTTTTGCAAGCTCAACAAATGCATATATGCTGATATACAGACTGAAGGATCCAACAAGAAATGCAAAGTTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTAGAAGTGGACGAGTACCCAGAACACATTAAGAATCTGGTGCAGAAGGAGAGAGAGCTGGAAGAGCAGGAAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GAGGCAACGAGAGATTGAACGCAACACGTGCAAGATAAAATTATTTTGTTTGCATCCTGTGAAACAAGTAATGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGAAAACAAGCTGGAGGTTCATAAGGATAAGACGCTAAAGGAAGCCGTTGAAATGGCTTATAAGATGATGGAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTAGAAGATGTGATTCCCTTGGATTGCTGTCGCCTGGTAAAATATGACGAGTTTCATGATTACCTGGAACGATC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTATGAGGGAGAAGAAGATACACCAATGGGGTTGCTTCTAGGAGGAGTCAAGTCCACATACATGTTTGATCTGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGTTGGAAACGAGAAAGCCTGATCAAATTTTTCAGTCTTACAAACCTGGAGAAGTGATGGTGAAAGTTCATGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTTGATCTGAAAGCAGAGACTGTCGCTGCTCCTGTAACAGTGCGTGCGTATTTAAATCAGACAGTTACAGAGTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAACAGCTGATCTCAAAGGCCACGCACTTACCTGCAGACTCCATGAGGATAGTGCTGGAGCGCTGCTACAATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACCTGCGCCTTCTCAGCATGCCCAGCAAGACCCTGAAGGCTGAGGGCTTCTTCAGAAGTAACAAGGTGTTTGTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAAAGCTCTGAGACAGTGGATCACCAGGCAGCCTTTACAGACTCCCACTTGTGGAAACTCCTGGATCGACATGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AAATACAATCCGGTTATTTGTTTTGCTGCCTGAACAATCTCCAGGATCATATTCGAAAAGGACAGCATACCAGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAGCTGGAGGTGATTCTGGTAATGTGGACGATGATTGTGAAAGAGTCAAAGGACCTGCAGGGAATTTAAAGTCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GTGGATGCTATTCTAGAAGAGAGCACTGAAAAACTGAAAAGCTTGTCACTGCAGCAGCAGCAGCAAGATGGGGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAACGGAGACAGCAGCAAAAGCACTGAGACAAGTGACTTTGAAAATATTGAATCCCCTCTCAATGAGAGGGGCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTTCCACCTCTGTGGATAATCGAGAACTTGAACAGCACATTCAGACTTCTGACCCAGAAAACTTTCAGTCTGAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAACGCTCGGACTCAGATGTGAATAATGACCGGAGTACAAGTTCGGTAGACAGTGATATTCTTAGCTCCAGTCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CAGCAGTGACACTTTGTGCAATGCAGACAGCGCTCAGATTCCTCTGGCCAATGGACTTGACTCTCACAGTATCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CAAGTAGTAGAAGAACTAAAGCAAACGAGGGGAAAAAGGAGACCTGGGACACAGCTGAAGAAGACTCTGGGACT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GACAGTGAATATGACGAGAGTGGCAAGAGCAGGGGGGACATGCAGTACATGTACTTCAAAGCTGACCCCTACAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGCGGATGAAGGCTCTGGGGAAGGACACAAATGGTTGATGGTGCATGTTGATAAGAGAATCACCCTGGCAGCTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TCAAACAGCATTTAGAACCTTTTGTTGGAGTCCTCTCCTCTCACTTCAAGGTTTTTCGAGTGTACACCAGCAAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CAAGAGTTTGAGACCGTCCGGTTGAATGAGACCCTTTCATCATTTTCAGATGACAATAAGATCACAATCCGACT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGGGAGAGCACTGAAGAAGGGAGAGTACAGAGTTAAAGTGTGCCAGCTCTTAGTCAATGAGCAAGAGCCATGCA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGTTTCTGCTAGACGCTGTGTTTGCTAAAGGCATGACTGTGCGGCAATCAAAAGAGGAGCTGATTCCTCAACTC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGGGAGCAGTGTGGCTTAGACCTCAGCATCGACAGGTTTCGTCTAAGGAAGAAAACATGGAAGAATCCTGGCAC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGTCTTTTTGGATTATCATATTTATGAAGAAGATATTAATATTTCCAGCAACTGGGAAGTTTTCCTGGAAGTTC 3700
Query 1 -----------------ATGAAGTCCATGTCACAGCTTGCAGTTTTGTCAAGACGGTGGAAGCCTTCAGAGATG 57
|||||||||||||||||||||||..|.||..|||||||.||||.||||.||||||||
Sbjct 3701 TTGATGGTGTGGAGAAGATGAAGTCCATGTCACAGCTTGCCATCTTAACAAGACGCTGGAGGCCTGCAGAGATG 3774
Query 58 AAGTTGGATCCCTTCCAGGAGGTTGTATTGGAAAGCAGTAGTGTGGACGAATTGCGAGAGAAGCTTAGTGAAAT 131
||||||||.||||||||||||.||||.||||||||||.||||||.||.|||.|.|||||||||||.||||||||
Sbjct 3775 AAGTTGGACCCCTTCCAGGAGCTTGTGTTGGAAAGCAATAGTGTTGATGAACTCCGAGAGAAGCTAAGTGAAAT 3848
Query 132 CAGTGGGATTCCTTTGGATGATATTGAATTTGCTAAGGGTAGAGGAACATTTCCCTGTGATATTTCTGTCCTTG 205
||||||||||||||||||.||.|||||||||||.||||||||.|||||.||.||||||||||||||||||||||
Sbjct 3849 CAGTGGGATTCCTTTGGAAGACATTGAATTTGCCAAGGGTAGGGGAACCTTCCCCTGTGATATTTCTGTCCTTG 3922
Query 206 ATATTCATCAAGATTTAGACTGGAATCCTAAAGTTTCTACCCTGAATGTCTGGCCTCTTTATATCTGTGATGAT 279
||||||||||||||||.|||||||||||||||||.||||||||||||||.||||||||||||||||||||||||
Sbjct 3923 ATATTCATCAAGATTTGGACTGGAATCCTAAAGTCTCTACCCTGAATGTTTGGCCTCTTTATATCTGTGATGAT 3996
Query 280 GGTGCGGTCATATTTTATAGGGATAAAACAGAAGAATTAATGGAATTGACAGATGAGCAAAGAAATGAACTGAT 353
|||||.|||||||||||||||||||.||||||||||.|.||||||||||||||||||||||||||||||.||||
Sbjct 3997 GGTGCCGTCATATTTTATAGGGATAGAACAGAAGAAGTGATGGAATTGACAGATGAGCAAAGAAATGAATTGAT 4070
Query 354 GAAAAAAGAAAGCAGTCGACTCCAGAAGACTGGACATCGTGTAACATACTCACCTCGTAAAGAGAAAGCACTAA 427
||||||.||||||||.|||||.||||||||.|||||||||||.||||||||.|||||.||||||||||||||.|
Sbjct 4071 GAAAAAGGAAAGCAGCCGACTGCAGAAGACGGGACATCGTGTGACATACTCCCCTCGCAAAGAGAAAGCACTCA 4144
Query 428 AAATATATCTGGATGGAGCACCAAATAAAGATCTGACTCAAGAC 471
|.||.||.||||||||.||.||||||||||||.||.||||||||
Sbjct 4145 AGATCTACCTGGATGGGGCGCCAAATAAAGATGTGGCTCAAGAC 4188
