Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12162
- Subject:
- XR_001737264.2
- Aligned Length:
- 4431
- Identities:
- 566
- Gaps:
- 3861
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCTTGTTCCCAGGGGCAGTTGGCGGAAGAGATCGAGCTCCCTGGCTGCCGGCTCGCCTTCTGCGTGGAGTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCGGTCTGGGTTTCGCTGTCTGCTCTTGGCCCGGGGTCATTTTGTCGGCGTCGGGTGCCCTCTCTTGCCCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGGCACAGCGAGGCGGCCCCTTCTCCCGACGACGTTCGATGGAGTAGGGTCCCAGACCGTTGTCCCGAAGAG 222
Query 1 ------------------------------------------------------------ATGGCTAACAACAG 14
||||||||||||||
Sbjct 223 CGAGATCGAGCTTGGCCCCCTCCCCCCCCTCCTTCCCTCCCTCCTTCCTTCCGCCGCAACATGGCTAACAACAG 296
Query 15 CCCCGCGCTGACAGGCAACTCGCAGCCGCAGCACCAGGCGGCTGCAGCTGCGGCTCAGCAACAGCAGCAGTGCG 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCCCGCGCTGACAGGCAACTCGCAGCCGCAGCACCAGGCGGCTGCAGCTGCGGCTCAGCAACAGCAGCAGTGCG 370
Query 89 GCGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAG 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAG 444
Query 163 ACCATGAACCTCAACCCCATGATCCTGACCAACATCCTGTCGTCGCCTTACTTCAAAGTACAGCTCTACGAGCT 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACCATGAACCTCAACCCCATGATCCTGACCAACATCCTGTCGTCGCCTTACTTCAAAGTACAGCTCTACGAGCT 518
Query 237 CAAGACCTACCACGAGGTGGTGGACGAGATCTACTTTAAGGTCACGCACGTTGAACCATGGGAGAAAGGAAGCA 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAGACCTACCACGAGGTGGTGGACGAGATCTACTTTAAGGTCACGCACGTTGAACCATGGGAGAAAGGAAGCA 592
Query 311 GGAAAACAGCGGGCCAGACAGGGATGTGCGGAGGGGTTCGAGGTGTTGGAACAGGAGGAATTGTTTCTACAGCA 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAAAACAGCGGGCCAGACAGGGATGTGCGGAGGGGTTCGAGGTGTTGGAACAGGAGGAATTGTTTCTACAGCA 666
Query 385 TTTTGCCTGTTATACAAATTATTTACCCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTATAACACACACAGA 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTTTGCCTGTTATACAAATTATTTACCCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTATAACACACACAGA 740
Query 459 CTCTCCATATATTAGAGCGCTTGGATTTATGTATATAAGATATACACAGCCCCCTACAGATCTGTGGGACTGGT 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTCTCCATATATTAGAGCGCTTGGATTTATGTATATAAGATATACACAGCCCCCTACAGATCTGTGGGACTGGT 814
Query 533 TTGAATCCTTCCTTGATGATGAAGAGTTCT-TCACC------CTC----------------------------- 570
||||||||||||||||||||||||||.|.| |||.| .||
Sbjct 815 TTGAATCCTTCCTTGATGATGAAGAGGTATGTCAACAAGGATATCTGCAGCGATTATATTTGGAAATACTGTAT 888
Query 571 -------------------------------------------------------------------------- 570
Sbjct 889 ATCTGAACACTTAAATGTGTGTTTGGGACTGACAATAGCTGACTAACATGTCCTGAGCTGTGAGAGGGCATAGC 962
Query 571 -------------------------------------------------------------------------- 570
Sbjct 963 AAGAAGGCCTTCATGCGGTAATGACCCTTTTCAGAGACAATGGTCATCATGGATTATGCGTTTCCAATTATTTG 1036
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1037 TTCATTTATTTATTTTCTACATAACTAAATTAGAAACCTCACTGCTTCATGGCAGTTGGTTTGCTATTGCTTCC 1110
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1111 AGTTTTATTAGGGCTTCATTTTATATTAGAGCTGTTAAAAGATAACCTTTAGACAGGAATTATCTAAAGTAGAT 1184
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1185 CATATGTAGCTAGGTTATGGTGCAAGGTATATGATGTGTGCAAATATGTCCACAGAAATAAATACATAGTAGGT 1258
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1259 ATGTGGAATGTAAATTTAAGTCAATCGTTCCGCATAGTTTAGAAATGTAAGGGGCTTTTTCATATTGTTAACTG 1332
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1333 AGTGAGATCAGTTCCCTTTATGCCTGTGAGGCTGCAGGGTTTGTTCTCACTTGCATGCACACACTAAGCCCAAA 1406
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1407 TATTTCTGTTCATTCATTGTCAGATCAGGATATGAAAATAAAATTTTTCTGTTAGTTTTTTTTGTATTGAGATT 1480
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1481 CCAAAGATGGTAATATTTTTATAATATTCATGTATATATGGAAATACTTTTTTTGACGGCTAGGGTATCTTTTG 1554
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1555 TGTTTCTGTAGGACCTAGATGTGAAGGCTGGTGGAGGCTGTGTAATGACCATTGGAGAAATGCTACGATCTTTT 1628
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1629 CTCACAAAACTGGAGTGGTTTTCTACCTTGTTTCCAAGAATTCCAGTTCCAGTTCAAAAGAATATTGATCAACA 1702
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1703 GATTAAAACCCGACCTAGAAAAATCAAGAAAGATGGGAAGGAAGGTGCTGAGGAAATAGACAGACATGTTGAAC 1776
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1777 GCAGACGTTCAAGGTCTCCAAGGAGATCTCTGAGTCCACGGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCAT 1850
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1851 CATCGGGAGGGCCATGGGTCTTCTAGTTTTGACAGAGAATTAGAAAGAGAGAAAGAACGCCAGCGACTAGAGCG 1924
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1925 TGAAGCCAAAGAAAGGGAGAAAGAACGGCGAAGATCCCGAAGTATTGACCGGGGGTTAGAACGCAGGCGCAGCA 1998
Query 571 -------------------------------------------------------------------------- 570
Sbjct 1999 GAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATAGGAAAGGGGATAGAAGGGACAGGGATCGAGAA 2072
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2073 AGAGAGAAAGAAAATGAGAGAGGTAGAAGACGAGATCGTGACTATGATAAGGAAAGAGGAAATGAACGAGAAAA 2146
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2147 AGAGAGAGAGCGATCAAGAGAAAGGTCCAAGGAACAGAGAAGTAGGGGAGAGGTAGAAGAGAAGAAACATAAAG 2220
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2221 AAGACAAAGATGATAGGCGGCACAGAGATGACAAAAGAGATTCCAAGAAAGAGAAAAAACACAGTAGAAGCAGA 2294
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2295 AGCAGAGAAAGGAAACACAGAAGTAGGAGTCGAAGTAGAAATGCAGGGAAACGAAGTAGAAGTAGAAGCAAAGA 2368
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2369 GAAATCAAGTAAACATAAAAATGAAAGTAAAGAAAAATCAAATAAACGAAGTCGAAGTGGCAGTCAAGGAAGAA 2442
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2443 CTGACAGTGTTGAAAAATCAAAAAAACGGGAACATAGTCCCAGCAAAGAAAAATCTAGAAAGCGTAGTAGAAGC 2516
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2517 AAAGAACGTTCCCACAAACGAGATCACAGTGATAGTAAGGACCAGTCAGACAAACATGATCGTCGAAGGAGCCA 2590
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2591 AAGTATAGAACAAGAGAGCCAAGAAAAACAGCATAAAAACAAAGATGAGACTGTGTGAAAATATTTTGTAAAAG 2664
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2665 TGGATCACATTGAATCCTATAAATGATTAAATCTGCTTTTTTCCCCCACGTTGAGATTGTGCAGTAGTTCGCAC 2738
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2739 TCCTCAAGCTCTCCCTGTAGGCTGCATTTTCATTTCCTCTTTCGTGTAGGGAAGTGCCTTTGTAATTCCATTTA 2812
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2813 TTGCATTGGTGTTTTCACCCAATTGTTAAGTTTGATACATGATGCACAGATTGTTCTTGCATTTTTATTGTTTG 2886
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2887 TTTTTGAAATGTACAGTCTGTACATATGTCCTGAAAATGTTTTAATTCCTTTGGCATGGTTGCCATGTTGGTTA 2960
Query 571 -------------------------------------------------------------------------- 570
Sbjct 2961 AATTTGTATAAGGCAATAAACTGCCACTAATCTATTTTTGTTTTGTAGGTGTGGGATTATGGTTTGTGTACTGA 3034
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3035 AGTTAGCATGGCTGTGCTTTTCGTAATAGAATGCTAAAGACTTTGAGAATGGATCTTGGATGTCTATTATAGGA 3108
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3109 GAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTTGTCTACTGTATATTATCTTGG 3182
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3183 AAGGCTCTTGTTAATATGTTACACTTAATATTCTCCACAGTTACCTTTAGAGAGAATTTATGAGAAGTTAGTTT 3256
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3257 CTGATGCAGAGGTTTTTAGGCTGTGATTTCATCAAAAGTCCTTTTAGCATTCTACCTCAAAGGGACACTTAGTA 3330
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3331 TGCCTAAAATTTATTCACTTAGTTTTCCTTTTTTATTTGAAAAAATACATGACATGTAATCTTTTTTTCTTGAA 3404
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3405 TTCTTTCTCAGATTTTAAAGTACTATATTAAAGAAAAAAATTAATGTCTAAAGCCTAGCATTCTTGCAGAACCC 3478
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3479 TATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAGTAGAGAAACAGATTCAAGCCTCAAGCTTCCAAAGC 3552
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3553 ATTTTTATAAATGGAAAATCCTTAAATTATGAAACAGCTTGATATAGTGTCCTTTTTTTAAAATTCAGAACTTT 3626
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3627 TTTTATTGATAATGGAGATTGCTGTTTGAGTTTTTAAACTTAATCTAGAACAGAGGAGTATTAAAAGTAATGCT 3700
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3701 GTGCTGCATTATTTAAGACTATCAGCAAATTATTTGATAGATTGTTCTTACAACTTGTATTCTGATTACAGAAC 3774
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3775 CATCATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTCCCCCATTTGTTAAATT 3848
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3849 TTTTTAGCATATTTATATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAG 3922
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3923 TGCCCAGATGACAAGTGAATTTTGGAGAAATGCATAGACTGGGATTGGGCATGTGGTAATCAATAATCTTTATT 3996
Query 571 -------------------------------------------------------------------------- 570
Sbjct 3997 AGAATACTTGATAATGGCAGTTCCCTTTGTCAGTGGTTGTTACATGTGTCATTTGATTACTTTGTTCCATGTCA 4070
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4071 AAGACGTTTATTGGGATACCTTTTACTTGGACAATATGTTAGCATTTTTTAAAATTTGGACTTGAAATTCTTTA 4144
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4145 AGATAATTCACCCAATTCTTTTTAGAAAAGAAAATAGAGGCCCAAAGTAATGATGTCAGTGCTAGGGCTAAAAC 4218
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4219 TCAGTATTCTGACAGTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA 4292
Query 571 -------------------------------------------------------------------------- 570
Sbjct 4293 CTAATGCGCACTCAGAAGCCACCTTGCAAAAATGTTAAATGGAGCAAACGAGTACACTTGCAAGAGTCCTCCAT 4366
Query 571 ----------------------------------------------------------------- 570
Sbjct 4367 ATGTGGGCTTAACATATGTACCACTCCATTTTAGAAAAATCTCATTAAATGAATTCTTCTAAAAA 4431
