Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12167
- Subject:
- XM_011246730.2
- Aligned Length:
- 2974
- Identities:
- 681
- Gaps:
- 2198
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCCTCATTGCGCAAAAGAGTGAAAATACAGGCCGAGAATGCAGAACCCAAAGATGAATGCTCTTTCTTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAGTTGTCATCTGGCTCTGAAGAAGATAACAAGGAAGACAGCATTTGGGAACCTCAGAAGAAAGTTCCCAGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCGTAGACAGCCTGCTTCCAAGGGATCCAAACGGAAGCAGGGGCCCAGGGCGAAGAAGAGCTCCCAACAGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GATGACGAATCAAAAGATGTGGCTGTTAAGGAGGAGTTGAACAGCCCGGTGGCTATTGTTGATGCAGATTTGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAGAAAAGCCACAAGTTGCAGACGACAAAGACTCTTAAAACTGCAGCAAAAAAGCAAAAAAAACCAGTTCCGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGCCAAAAAAAGGTTGAAAGTTGATGAGGAAACCAGCCAGGCCAGCCCCTTGGAGGGTGGAGGCAGTAATGTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGACCCCCTCAACAAGCGCCTGTGGAAATGTGTGCAAGAAGGAGGAGAGCGAGGACAGCTTCACGTTTGGGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTCCCCGGTAAAGAGGATCAGGACTGAGTCATGTCCTCAGGGGAGGCCGGCCAGGGTTCCCGACGGTGTCAGCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACATTAAAGAGGAGGTAGAAATGAACTGGGACGTAGTACAGGTTTTATCTGAGAGAACTAATATTGAACCTTGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTTTGTGCCAACATCATACGCCTCTTTAATGATGACAACACAATCCCCTTCATTGTACGCTATCGAAAAGAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTAATAACCTTGATGCTGATTTCTTAAGAGAAGTTCGTCAAACCCTAGATGAGCTACGGGATGTTGCCAAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGGTTCATAGTAGAATCCAGAAAATTAAGAAGGAGGGGAAAATGTCGGAGTGCTTGCTGCAAGCCTTGTTGAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTAAAACGTTCGAGGAACTAGAGCATGTGTCTGCTCCATATAAAATGGGGAGCAAGGGCACGAAAGCCCAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGCAAAACAGTTGGGGCTAGAAGGAGCAGCGTGGACCCTGCTGGAGAACCCGGGGCAGCTCAACCTGCTGTCTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACATCAAGCCTGATGTTAAAGGCCTTTCTGAGCTCAACGATATCGAAACAGGAGTACAACATATTTTAGCAGAC 1110
Query 1 ATGATTGCTAAAGACAAAGACACGCTTGACTTCATTCGGAACTTGTGCCAGAAGAGACATGTTTGTATCCAGTC 74
||||||||||||||||||||.|||||||||||.||||||..||||||..|..|.|||.|..|||||||||||||
Sbjct 1111 ATGATTGCTAAAGACAAAGATACGCTTGACTTTATTCGGGGCTTGTGTAAACATAGATACATTTGTATCCAGTC 1184
Query 75 ATCTCTGGCAAAAGTATCCTCAAAAAAGGTAAATGAGAAAGATGTTGATAAGTTTCTGCTCTACCAGCATTTTT 148
||||||.||||||||||||||||||||.|||||||||||.||.|||||||||||||.|||.||||||.||||.|
Sbjct 1185 ATCTCTTGCAAAAGTATCCTCAAAAAAAGTAAATGAGAAGGAAGTTGATAAGTTTCAGCTTTACCAGAATTTCT 1258
Query 149 CCTGCAACATAAGAAACATTCACCATCATCAGATTCTGGCAATTAACCGTGGAGAAAATTTGAAGGTACTGACG 222
|||||||||||||.|.|||.||||||||.|||||||||||.||||||||.|||||.|||||||||.|.|||||.
Sbjct 1259 CCTGCAACATAAGGACCATCCACCATCACCAGATTCTGGCCATTAACCGAGGAGAGAATTTGAAGATCCTGACC 1332
Query 223 GTTAAGGTCAATATTTCTGATGGAGTGAAGGATGAATTCTGTAGGTGGTGCATCCAAAACAGGTGGAGACCACG 296
||.||.|||||.||||||||||||||.|||.|.|||||||||.|.|||||.||.||.|||||||||||.|||||
Sbjct 1333 GTCAAAGTCAACATTTCTGATGGAGTAAAGAACGAATTCTGTCGATGGTGTATACAGAACAGGTGGAGGCCACG 1406
Query 297 TAGCTTTGCAAGGCCAGAGTTAATGAAGATCTTATATAATTCACTGAATGATTCCTTTAAACGCCTTATTTATC 370
|.||||||||.||||||||||.||||||||||||.|||||||||||.||||.||||||||.|||||.|||..||
Sbjct 1407 TGGCTTTGCACGGCCAGAGTTGATGAAGATCTTACATAATTCACTGGATGACTCCTTTAAGCGCCTCATTGTTC 1480
Query 371 CTCTTCTCTGTAGAGAATTCAGAGCCAAACTAACATCAGATGCAGAGAAGGAATCAGTAATGATGTTTGGACGG 444
||||.|||||||||||.||||||||||||||.||||||||||||||||||.|||||||||||||||||||||.|
Sbjct 1481 CTCTCCTCTGTAGAGAGTTCAGAGCCAAACTGACATCAGATGCAGAGAAGCAATCAGTAATGATGTTTGGACAG 1554
Query 445 AACCTTCGTCAGCTCCTTTTAACAAGCCCTGTTCCAGGGCGCACCTTAATGGGAGTGGATCCTGGTTATAAACA 518
|||||.||.|||||||||||||||||.|||||.|||||.||||||.|.||||||||.||||||||.||.|||||
Sbjct 1555 AACCTCCGCCAGCTCCTTTTAACAAGTCCTGTGCCAGGCCGCACCCTGATGGGAGTAGATCCTGGCTACAAACA 1628
Query 519 TGGTTGCAAATTAGCTATAATTTCTCCTACTAGTCAGATACTTCATACTGATGTGGTTTACTTGCATTGTGGAC 592
|||.||||||.||||.||.||||||||||||||||||||.|||||.||.|||||||||||||||||.|||||||
Sbjct 1629 TGGATGCAAACTAGCCATCATTTCTCCTACTAGTCAGATCCTTCACACGGATGTGGTTTACTTGCACTGTGGAC 1702
Query 593 AAGGCTTCCGAGAGGCGGAGAAAATAAAGACACTTTTGCTGAATTTCAACTGCAGCACAGTAGTGATTGGAAAT 666
||||||||||||||||.|||||.||.||||..|||||||||.|||||||||||||.|||||.|||||.||||||
Sbjct 1703 AAGGCTTCCGAGAGGCCGAGAAGATCAAGAGGCTTTTGCTGCATTTCAACTGCAGAACAGTGGTGATCGGAAAT 1776
Query 667 GGAACTGCCTGCAGGGAAACAGAAGCTTACTTTGCTGACCTGATAATGAAGAATTATTTTGCACCACTGGATGT 740
||||||||||||.|||||||.|||||.|||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 1777 GGAACTGCCTGCCGGGAAACTGAAGCCTACTTTGCTGACCTGATAATGAAAAATTACTTTGCACCACTGGATGT 1850
Query 741 TGTTTACTGTATCGTCAGTGAAGCAGGAGCA----TCAATCTACAGTGTCAGCCCTGAAGCTAACAAAGAGATG 810
.|||||||||.|..| |||| |.||| || |||| ||||.|
Sbjct 1851 CGTTTACTGTGTGTT------------AGCAACTTTTAAT----AG----------GAAG--AACACA------ 1890
Query 811 CCAGGGCTGGACCCTAATTTGAGAAGTGCAGTTTCCATAGCAAGGCGTGTACAAGATCCATTAGCTGAGCTAGT 884
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 885 GAAAATTGAGCCAAAGCACATTGGAGTTGGAATGTATCAGCATGACGTATCCCAGACTTTACTCAAGGCAACAC 958
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 959 TGGACAGTGTTGTAGAAGAATGTGTCAGCTTTGTGGGAGTGGATATTAACATCTGTTCAGAAGTTTTGTTAAGG 1032
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1033 CATATTGCAGGACTCAATGCCAACAGGGCCAAAAATATTATTGAATGGCGAGAGAAAAATGGACCCTTTATCAA 1106
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1107 CCGAGAACAGCTGAAGAAAGTGAAAGGGCTGGGCCCAAAATCCTTCCAACAGTGTGCTGGCTTCATCAGAATCA 1180
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1181 ACCAGGATTATATCCGAACGTTTTGCAGTCAGCAAACTGAAACTTCAGGCCAAATTCAAGGAGTTGCTGTGACA 1254
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1255 TCTTCAGCAGACGTTGAGGTCACAAATGAGAAGCAGGGCAAAAAGAAGAGCAAAACTGCAGTGAATGTTTTACT 1328
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1329 GAAGCCAAATCCTTTGGACCAAACTTGTATTCATCCAGAATCATATGACATAGCAATGAGGTTTTTGTCATCCA 1402
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1403 TTGGAGGGACACTGTATGAGGTTGGAAAGCCTGAAATGCAACAAAAAATAAATTCATTCCTTGAAAAGGAAGGA 1476
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1477 ATGGAGAAAATTGCAGAAAGATTGCAAACAACAGTACACACCTTACAGGTCATCATAGATGGTCTCAGCCAGCC 1550
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1551 TGAAAGCTTTGACTTTCGAACAGATTTTGATAAACCTGATTTCAAGAGAAGCATAGTATGCCTGGAAGATCTGC 1624
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1625 AGATTGGGACAGTTCTTACAGGCAAAGTTGAGAATGCCACTCTCTTTGGAATTTTTGTGGATATAGGAGTGGGG 1698
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1699 AAATCTGGGCTGATTCCCATACGAAATGTAACAGAAGCAAAACTTTCAAAAACAAAGAAGAGAAGAAGCCTTGG 1772
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1773 ACTGGGCCCCGGAGAAAGAGTGGAAGTCCAAGTACTCAACATTGACATCCCCCGATCTAGGATTACTCTGGACC 1846
Sbjct 1891 -------------------------------------------------------------------------- 1890
Query 1847 TCATTCGGGTGTTA 1860
Sbjct 1891 -------------- 1890
