Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12183
- Subject:
- XM_017006784.1
- Aligned Length:
- 4450
- Identities:
- 1230
- Gaps:
- 3203
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAGTATTAAGAGATCCAATTAAGAAGAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTGATCATAATTACGGAGCCCCTCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCGACACCTCCTGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAATGGCCTGCCGTCGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCAGGGGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTGTTGTATACAGCAACACAGCACACACCTACAAGCATCACCTTAACTGTTAGAAGAACCAAACCCAAGAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGGGATCCCGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTCCTTGCGGATGAAGAATTCTCCCTCTGAAGCACAGAATTTAGATGAGAATACAACTGAGGGCTGGGAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCGGATAAGACTATGGACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACACTATTAATAAGACTGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCGGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAAAAAACCATACCCCTTTGTGCTCTTCTACTCAAAATTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAATGCAGAGGTGCGACACATGATTGCAGATGGGATGATTCACCTGTGCATCTATGCTGTGTCTGCCATCACCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGATGCTGAGGTCACCATAGCATTTGATTATGAGTATAGTAACTGTAATTATAAAGTGGACTGTGCCTGTCAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGGGAAACCGGAATTGTCCTATACAAAAAAGGAATCCTAATGCTACAGAACTGCCACTCCTACCACCTCCTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGCCTACCCACCATTGGAGCAGAGACTAGACGTAGAAAAGCACGACGGAAAGAGCTAGAGATGGAGCAGCAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTCCAGAAAAAGTAACTGTATCCAGTGATCAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGATGACCAGGAGAACCTAGC 1628
Query 1 -------------------------------------------ATGCATGCTTTTGAAAACTTAGAGAAAAGAA 31
|||||||||||||||||||||||||||||||
Sbjct 1629 TCATAGCAGGAGGACCAGGGAAGATAGAAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTTAGAGAAAAGAA 1702
Query 32 AGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCT 1776
Query 106 GTTGGTGAAGAGACAAAAACTGAAGCCCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAG 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GTTGGTGAAGAGACAAAAACTGAAGCCCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAG 1850
Query 180 CACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCAGAAAAACTAGTCC 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCAGAAAAACTAGTCC 1924
Query 254 CCAAGCCACCTCCAGCAAAGCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGCC 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCAAGCCACCTCCAGCAAAGCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGCC 1998
Query 328 CAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG 2072
Query 402 AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAACAGGCCATTAACAGGGT 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAACAGGCCATTAACAGGGT 2146
Query 476 CTGACCCAACTGTGGTGTCAATTACTGGATCCCATGTCAACCGTGCTGCATCTAAATACCCCAAAACCAAAAAG 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CTGACCCAACTGTGGTGTCAATTACTGGATCCCATGTCAACCGTGCTGCATCTAAATACCCCAAAACCAAAAAG 2220
Query 550 TATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCAC 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCAC 2294
Query 624 AACGGATCCAACTGTACTGGCAACGACCCTAAACATGTTACCAGGTCTTATCCATTCCCCGTTAATTTGCACCA 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AACGGATCCAACTGTACTGGCAACGACCCTAAACATGTTACCAGGTCTTATCCATTCCCCGTTAATTTGCACCA 2368
Query 698 CCCCCAAACACTACATTCGCTTTGGCTCACCCTTTATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGC 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCCCCAAACACTACATTCGCTTTGGCTCACCCTTTATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGC 2442
Query 772 ACATTCAGCTCCTGTAAGAAGCGCTGGATAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACC 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ACATTCAGCTCCTGTAAGAAGCGCTGGATAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCATCTGTACC 2516
Query 846 CCAAGAGACTAGAACTCAGCACCTATACCAAAGCAATGAGAATAGTAGCTCTTCTAGTATCTGCAAAGACAATG 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CCAAGAGACTAGAACTCAGCACCTATACCAAAGCAATGAGAATAGTAGCTCTTCTAGTATCTGCAAAGACAATG 2590
Query 920 CAGACTTGTTGAGCCCATTAAAGAAATGGAAGTCTCGCTATCTGATGGAGCAGAATGTCACCAAGTTACTTCGG 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CAGACTTGTTGAGCCCATTAAAGAAATGGAAGTCTCGCTATCTGATGGAGCAGAATGTCACCAAGTTACTTCGG 2664
Query 994 CCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATC 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCATC 2738
Query 1068 TCACCCAGGAGAAGAGGAGTGTCGAAATGGATACAGCCTCATGTTTTCACCAGTCACATCTCTTACTACTGCTA 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 TCACCCAGGAGAAGAGGAGTGTCGAAATGGATACAGCCTCATGTTTTCACCAGTCACATCTCTTACTACTGCTA 2812
Query 1142 GTCGCTGCAACACTCCTCTACAGTTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCTT 1215
|||||||||||||||||||||||||||||
Sbjct 2813 GTCGCTGCAACACTCCTCTACAGTTTGAG--------------------------------------------- 2841
Query 1216 GACTCCAACACTAACAGCTGTGCTGATAGACCTTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCCTCAT-- 1287
|||| ||.| ||...||||.|| ||||| ||.|.|||
Sbjct 2842 ------AACA-TATC--CTCCCCTGAGAG---TTCCC---------------------------CTGCGCATAG 2876
Query 1288 -CCC---TCCCTCGGACCCACTTCTGAG-ACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTG 1356
||| |||||...|||| ||| | ||||..||.|.|.||| ||||..|||
Sbjct 2877 GCCCGAGTCCCTGTCACCC------GAGCA----TTTCAGAATCTGCAGT---GATGAGCAT------------ 2925
Query 1357 AGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTATGCCTACTCCCCTTTGAATGCTATGCCTCG 1430
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 1431 AGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTT 1504
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 1505 CCCCTGCAGAAGGATTTTCCAGCAGATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCT 1578
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 1579 GGTGGTGAAAGGGCCTGTGAAGGAGTCCCATCTGCCCCCCAGAACCCACCACAGAGGAAAAAAGTATCCCTGCT 1652
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 1653 GGAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAA 1726
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 1727 GCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCC 1800
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 1801 TCAGCCCGAACTCCATCTTCCCCTCACAAAAAATTCTCCCCATCTCATTCCTCTATGTCCCATTTGGAGGCGGT 1874
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 1875 AAGCCCATCAGATTCCAGAGGCACTTCTTCATCTCACTGCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGG 1948
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 1949 TTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCC 2022
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2023 CAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAAAGACTCAGACCCTGCAGATGGAGAAGG 2096
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2097 CCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAACAGTTTACAGCCCTTCCAGATACAGCTACCAGCTCC 2170
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2171 TGCAGTGTGATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCCCTTCAGAGGACATCCT 2244
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2245 ACACAGTCTCCAGGATACAGTTATCGAACTACTGCACTGAGACCTGGAAACCCCCCCTCTCACGGTTCTTCAGA 2318
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2319 ATCATCCCTCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCCCATTTACGG 2392
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2393 GGACACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGAGCTGC 2466
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2467 CCTTCTAGTGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAG 2540
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2541 CACAGGAACTCTGAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTCATTGCCATCAGACTTACGGACTATCA 2614
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2615 GTCTGCCCAGTGCTGGGCAGTCAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTAC 2688
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2689 CCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAGAC 2762
Sbjct 2926 -------------------------------------------------------------------------- 2925
Query 2763 GGGACTTTCC 2772
Sbjct 2926 ---------- 2925
