Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12183
- Subject:
- XM_017006785.1
- Aligned Length:
- 4455
- Identities:
- 828
- Gaps:
- 3612
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAGTATTAAGAGATCCAATTAAGAAGAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTGATCATAATTACGGAGCCCCTCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCGACACCTCCTGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAATGGCCTGCCGTCGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCAGGGGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTGTTGTATACAGCAACACAGCACACACCTACAAGCATCACCTTAACTGTTAGAAGAACCAAACCCAAGAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGGGATCCCGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTCCTTGCGGATGAAGAATTCTCCCTCTGAAGCACAGAATTTAGATGAGAATACAACTGAGGGCTGGGAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCGGATAAGACTATGGACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACACTATTAATAAGACTGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCGGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAAAAAACCATACCCCTTTGTGCTCTTCTACTCAAAATTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAATGCAGAGGTGCGACACATGATTGCAGATGGGATGATTCACCTGTGCATCTATGCTGTGTCTGCCATCACCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGATGCTGAGGTCACCATAGCATTTGATTATGAGTATAGTAACTGTAATTATAAAGTGGACTGTGCCTGTCAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGGGAAACCGGAATTGTCCTATACAAAAAAGGAATCCTAATGCTACAGAACTGCCACTCCTACCACCTCCTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGCCTACCCACCATTGGAGCAGAGACTAGACGTAGAAAAGCACGACGGAAAGAGCTAGAGATGGAGCAGCAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTCCAGAAAAAGTAACTGTATCCAGTGATCAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGATGACCAGGAGAACCTAGC 1628
Query 1 -------------------------------------------ATGCATGCTTTTGAAAACTTAGAGAAAAGAA 31
|||||||||||||||||||||||||||||||
Sbjct 1629 TCATAGCAGGAGGACCAGGGAAGATAGAAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTTAGAGAAAAGAA 1702
Query 32 AGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCT 1776
Query 106 GTTGGTGAAGAGACAAAAACTGAAGCCCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAG 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GTTGGTGAAGAGACAAAAACTGAAGCCCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAG 1850
Query 180 CACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCAGAAAAACTAGTCC 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCAGAAAAACTAGTCC 1924
Query 254 CCAAGCCACCTCCAGCAAAGCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGCC 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCAAGCCACCTCCAGCAAAGCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGCC 1998
Query 328 CAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG 2072
Query 402 AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAACAGGCCATTAACAGGGT 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAACAGGCCATTAACAGGGT 2146
Query 476 CTGACCCAACTGTGGTGTCAATTACTGGATCCCATGTCAACCGTGCTGCATCTAAATACCCCAAAACCAAAAAG 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CTGACCCAACTGTGGTGTCAATTACTGGATCCCATGTCAACCGTGCTGCATCTAAATACCCCAAAACCAAAAAG 2220
Query 550 TATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCAC 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCAC 2294
Query 624 AACGGATCCAACTGTACTGGCAACGACCCTAAACATGTTACCAGGTCTTATCCATTCCCCGTTAATTTGCACCA 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AACGGATCCAACTGTACTGGCAACGACCCTAAACATGTTACCAGGTCTTATCCATTCCCCGTTAATTTGCACCA 2368
Query 698 CCCCCAAACACTACATTCGCTTTGGCTCACCCTTTATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGC 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCCCCAAACACTACATTCGCTTTGGCTCACCCTTTATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGC 2442
Query 772 ACATTCAGCTCCTGTAAGAAGCGCTGGATAAAACAAGCCTTAGAAGAAGGGATGACTCAAACATCA---TCTG- 841
|||||||||||||||||||||..||||||..|....||||| |.||| ||||
Sbjct 2443 ACATTCAGCTCCTGTAAGAAGATCTGGATTCAGGCTGCCTT--------------------CCTCAGTGTCTGC 2496
Query 842 --------TACCCCAAGAGACTAGAACTCAGCACCTATACCAAAGCAATGAGAATAGTAGCTCTTCTAGTATCT 907
|.|.|| |||.| ||.|||.||.|
Sbjct 2497 CATTGCCCTCCTCC-----ACTGG----CATCACGTACA----------------------------------- 2526
Query 908 GCAAAGACAATGCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTCTCGCTATCTGATGGAGCAGAATGTCACC 981
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 982 AAGTTACTTCGGCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCAC 1055
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1056 ACCTGGCTCATCTCACCCAGGAGAAGAGGAGTGTCGAAATGGATACAGCCTCATGTTTTCACCAGTCACATCTC 1129
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1130 TTACTACTGCTAGTCGCTGCAACACTCCTCTACAGTTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAA 1203
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1204 GTAGGATACCTTGACTCCAACACTAACAGCTGTGCTGATAGACCTTCCCTACTCAACTCAGGTCATTCTGACCT 1277
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1278 GGCTCCTCATCCCTCCCTCGGACCCACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCC 1351
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1352 TCGTGAGAAACTCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTATGCCTACTCCCCTTTGAATGCTATG 1425
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1426 CCTCGAGCAGATGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATA 1499
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1500 TTGTTCCCCTGCAGAAGGATTTTCCAGCAGATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGT 1573
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1574 CACCTGGTGGTGAAAGGGCCTGTGAAGGAGTCCCATCTGCCCCCCAGAACCCACCACAGAGGAAAAAAGTATCC 1647
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1648 CTGCTGGAGTACCGAAAACGGAAACAAGAAGCTAAGGAAAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAG 1721
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1722 CAAAAGCAAGTCTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGG 1795
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1796 GATCCTCAGCCCGAACTCCATCTTCCCCTCACAAAAAATTCTCCCCATCTCATTCCTCTATGTCCCATTTGGAG 1869
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1870 GCGGTAAGCCCATCAGATTCCAGAGGCACTTCTTCATCTCACTGCAGACCTCAAGAGAATATCAGCAGTAGGTG 1943
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 1944 GATGGTTCCCACATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGG 2017
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2018 TGGCCCAAAAGGGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAAAGACTCAGACCCTGCAGATGGA 2091
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2092 GAAGGCCCAGAGACATTAAGCTCAGCACTCTCTAAAGGAGCAACAGTTTACAGCCCTTCCAGATACAGCTACCA 2165
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2166 GCTCCTGCAGTGTGATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCCCTTCAGAGGAC 2239
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2240 ATCCTACACAGTCTCCAGGATACAGTTATCGAACTACTGCACTGAGACCTGGAAACCCCCCCTCTCACGGTTCT 2313
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2314 TCAGAATCATCCCTCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCCCATT 2387
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2388 TACGGGGACACCAGGGTATTTTAGCAGCCAGCCACATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGA 2461
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2462 GCTGCCCTTCTAGTGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAG 2535
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2536 TCCAGCACAGGAACTCTGAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTCATTGCCATCAGACTTACGGAC 2609
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2610 TATCAGTCTGCCCAGTGCTGGGCAGTCAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGC 2683
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2684 ACTACCCACACCGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAAGACT 2757
Sbjct 2527 -------------------------------------------------------------------------- 2526
Query 2758 CAGACGGGACTTTCC 2772
Sbjct 2527 --------------- 2526
