Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12183
- Subject:
- XM_017006786.1
- Aligned Length:
- 4444
- Identities:
- 807
- Gaps:
- 3632
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAAGTATTAAGAGATCCAATTAAGAAGAATAGTTCTGAGTCTAAACCAGCCCAGAGTGGCTTCTCTAGGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAACTCCCCGCTCAGCTGCCCTGAATCTGTGGAGGCTAGTCCAGCAGTTAATGAGAAGAGCGTGTATTCCACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAATTATGGGACCACTCAGAGGCATGGGTGTCGAGGACTGCCTTATGCTGATCATAATTACGGAGCCCCTCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCGACACCTCCTGCTTCTCCCCCTGTCCAGACGATCATCCCTCGTTCTGACCTGAATGGCCTGCCGTCGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTAGAGGAACGCTGTGGAGACAGCCCGAACTCTGAAGGAGAAACTGTACCTACCTGGTGTCCTTGTGGTCTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCAGGATGGCTTCCTTCTCAACTGTGACAAGTGCAGGGGAATGAGCAGGGGGAAGGTTATTAGACTTCATCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGAAGCAGGACAACATATCAGGTGGGGATAGCAGTGCAACAGAAAGCTGGGATGAGGAGCTTTCTCCTTCCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTGTTGTATACAGCAACACAGCACACACCTACAAGCATCACCTTAACTGTTAGAAGAACCAAACCCAAGAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAAAAAGAGTCCAGAAAAGGGTCGTGCAGCACCAAAGACGAAGAAAATCAAGGCATTTCGAGAGGGATCCCGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTCCTTGCGGATGAAGAATTCTCCCTCTGAAGCACAGAATTTAGATGAGAATACAACTGAGGGCTGGGAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCGGATAAGACTATGGACTGACCAGTATGAAGAAGCTTTCACTAATCAGTACAGTGCAGATGTACAGAACGCGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGAACAACACCTACATTCTAGCAAGGAATTTGTGGGCAAACCTACTATTTTAGACACTATTAATAAGACTGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGGCCTGTAATAACACAGTTATTGGTTCCCAAATGCAGTTACAGCTGGGAAGAGTCACTCGTGTTCAAAAGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCGGAAGATCCTGAGGGCTGCAAGAGATTTGGCTTTGGACACTCTTATAATAGAGTATCGTGGGAAAGTCATGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TACGACAGCAATTTGAGGTCAATGGGCATTTCTTCAAAAAACCATACCCCTTTGTGCTCTTCTACTCAAAATTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATGGTGTAGAGATGTGTGTGGATGCCCGTACTTTCGGTAATGATGCTCGGTTCATCAGAAGATCATGTACACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAATGCAGAGGTGCGACACATGATTGCAGATGGGATGATTCACCTGTGCATCTATGCTGTGTCTGCCATCACCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGATGCTGAGGTCACCATAGCATTTGATTATGAGTATAGTAACTGTAATTATAAAGTGGACTGTGCCTGTCAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGGGAAACCGGAATTGTCCTATACAAAAAAGGAATCCTAATGCTACAGAACTGCCACTCCTACCACCTCCTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAGCCTACCCACCATTGGAGCAGAGACTAGACGTAGAAAAGCACGACGGAAAGAGCTAGAGATGGAGCAGCAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGAGGCTTCAGAGGAGAATAATGACCAGCAATCACAAGAAGTTCCAGAAAAAGTAACTGTATCCAGTGATCAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGGAAGTAGACAATCCAGAAGAAAAACCAGAAGAAGAGAAAGAAGAGGTTATAGATGACCAGGAGAACCTAGC 1628
Query 1 -------------------------------------------ATGCATGCTTTTGAAAACTTAGAGAAAAGAA 31
|||||||||||||||||||||||||||||||
Sbjct 1629 TCATAGCAGGAGGACCAGGGAAGATAGAAAGGTAGAAGCCATCATGCATGCTTTTGAAAACTTAGAGAAAAGAA 1702
Query 32 AGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGAAGCGGCGGGATCAGCCCTTGGAACAGAGCAACTCTGATGTAGAGATTACTACAACCACCTCAGAGACTCCT 1776
Query 106 GTTGGTGAAGAGACAAAAACTGAAGCCCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAG 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GTTGGTGAAGAGACAAAAACTGAAGCCCCTGAATCTGAAGTTAGCAACTCTGTTTCAAATGTTACCATCCCAAG 1850
Query 180 CACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCAGAAAAACTAGTCC 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CACCCCACAGAGTGTTGGTGTGAATACCCGGAGGTCTTCCCAAGCAGGGGATATTGCTGCAGAAAAACTAGTCC 1924
Query 254 CCAAGCCACCTCCAGCAAAGCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGCC 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCAAGCCACCTCCAGCAAAGCCTTCTAGGCCCCGGCCGAAGAGTCGAATTTCTCGGTACAGGACCAGTTCAGCC 1998
Query 328 CAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAAAGACTAAAGCGTCAGAAGCAGGCCAATGCACAGCAGGCAGAATTGTCACAAGCTGCCTTGGAAGAGGGAGG 2072
Query 402 AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAACAGGCCATTAACAGGGT 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AAGTAACAGTTTAGTAACTCCTACTGAAGCTGGAAGTCTAGACAGTTCAGGAGAAAACAGGCCATTAACAGGGT 2146
Query 476 CTGACCCAACTGTGGTGTCAATTACTGGATCCCATGTCAACCGTGCTGCATCTAAATACCCCAAAACCAAAAAG 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CTGACCCAACTGTGGTGTCAATTACTGGATCCCATGTCAACCGTGCTGCATCTAAATACCCCAAAACCAAAAAG 2220
Query 550 TATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCAC 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TATCTAGTTACAGAATGGTTGAATGACAAAGCAGAGAAGCAAGAGTGCCCTGTTGAGTGCCCTTTACGTATCAC 2294
Query 624 AACGGATCCAACTGTACTGGCAACGACCCTAAACATGTTACCAGGTCTTATCCATTCCCCGTTAATTTGCACCA 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AACGGATCCAACTGTACTGGCAACGACCCTAAACATGTTACCAGGTCTTATCCATTCCCCGTTAATTTGCACCA 2368
Query 698 CCCCCAAACACTACATTCGCTTTGGCTCACCCTTTATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGC 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCCCCAAACACTACATTCGCTTTGGCTCACCCTTTATCCCTGAGAGACGTCGAAGGCCCCTTCTGCCTGATGGC 2442
Query 772 ACATTCAGCTCCTGTAAGAAGCGCTGGATAAAACAAGCCTTAGA-AGAAGGGATGACTCAAACATCATCTGTAC 844
|||||||||||||||||||||.||.||| .|||| | |||..||
Sbjct 2443 ACATTCAGCTCCTGTAAGAAGGGCAGGA------GAGCC----ACAGAGTGG---------------------- 2484
Query 845 CCCAAGAGACTAGAACTCAGCACCTATACCAAAGCAATGAGAATAGTAGCTCTTCTAGTATCTGCAAAGACAAT 918
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 919 GCAGACTTGTTGAGCCCATTAAAGAAATGGAAGTCTCGCTATCTGATGGAGCAGAATGTCACCAAGTTACTTCG 992
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 993 GCCTCTGTCTCCAGTCACACCACCCCCTCCCAATTCAGGCTCAAAGAGTCCCCAGCTGGCCACACCTGGCTCAT 1066
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1067 CTCACCCAGGAGAAGAGGAGTGTCGAAATGGATACAGCCTCATGTTTTCACCAGTCACATCTCTTACTACTGCT 1140
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1141 AGTCGCTGCAACACTCCTCTACAGTTTGAGCTTTGTCACCGAAAAGACCTGGATTTGGCAAAAGTAGGATACCT 1214
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1215 TGACTCCAACACTAACAGCTGTGCTGATAGACCTTCCCTACTCAACTCAGGTCATTCTGACCTGGCTCCTCATC 1288
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1289 CCTCCCTCGGACCCACTTCTGAGACTGGTTTCCCAAGCAGAAGTGGAGATGGACATCAGACCCTCGTGAGAAAC 1362
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1363 TCAGACCAGGCATTTCGGACAGAGTTCAACTTGATGTATGCCTACTCCCCTTTGAATGCTATGCCTCGAGCAGA 1436
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1437 TGGACTGTATCGAGGATCTCCTCTAGTGGGGGATAGGAAGCCTTTACATTTGGATGGGGGATATTGTTCCCCTG 1510
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1511 CAGAAGGATTTTCCAGCAGATATGAACATGGCTTAATGAAAGACCTCTCTCGTGGATCCTTGTCACCTGGTGGT 1584
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1585 GAAAGGGCCTGTGAAGGAGTCCCATCTGCCCCCCAGAACCCACCACAGAGGAAAAAAGTATCCCTGCTGGAGTA 1658
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1659 CCGAAAACGGAAACAAGAAGCTAAGGAAAATTCTGCTGGTGGGGGAGGTGACTCTGCACAGAGCAAAAGCAAGT 1732
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1733 CTGCAGGAGCTGGGCAAGGCAGCAGTAACTCCGTTTCCGACACTGGTGCCCATGGTGTGCAGGGATCCTCAGCC 1806
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1807 CGAACTCCATCTTCCCCTCACAAAAAATTCTCCCCATCTCATTCCTCTATGTCCCATTTGGAGGCGGTAAGCCC 1880
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1881 ATCAGATTCCAGAGGCACTTCTTCATCTCACTGCAGACCTCAAGAGAATATCAGCAGTAGGTGGATGGTTCCCA 1954
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 1955 CATCAGTAGAACGACTCCGAGAAGGAGGGAGCATCCCCAAGGTCCTCCGAAGCAGCGTGAGGGTGGCCCAAAAG 2028
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2029 GGAGAGCCCTCTCCCACATGGGAGAGTAACATCACAGAGAAAGACTCAGACCCTGCAGATGGAGAAGGCCCAGA 2102
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2103 GACATTAAGCTCAGCACTCTCTAAAGGAGCAACAGTTTACAGCCCTTCCAGATACAGCTACCAGCTCCTGCAGT 2176
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2177 GTGATAGTCCTCGGACAGAATCACAAAGCCTCCTTCAGCAGAGTTCCTCCCCCTTCAGAGGACATCCTACACAG 2250
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2251 TCTCCAGGATACAGTTATCGAACTACTGCACTGAGACCTGGAAACCCCCCCTCTCACGGTTCTTCAGAATCATC 2324
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2325 CCTCTCTTCCACGTCCTATTCCAGCCCCGCCCACCCTGTGTCCACAGACTCGTTGGCCCCATTTACGGGGACAC 2398
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2399 CAGGGTATTTTAGCAGCCAGCCACATTCTGGAAACAGCACTGGCAGCAATCTTCCAAGGAGGAGCTGCCCTTCT 2472
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2473 AGTGCTGCTAGCCCTACCCTGCAGGGACCCTCAGACTCGCCAACCTCAGATTCAGTTTCTCAGTCCAGCACAGG 2546
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2547 AACTCTGAGTTCCACCTCCTTTCCTCAGAACTCTAGGTCGTCATTGCCATCAGACTTACGGACTATCAGTCTGC 2620
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2621 CCAGTGCTGGGCAGTCAGCTGTCTACCAGGCCTCCAGGGTATCTGCGGTTTCCAATTCACAGCACTACCCACAC 2694
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2695 CGTGGGAGTGGGGGTGTGCACCAGTACCGACTCCAGCCACTGCAAGGGTCAGGAGTCAAGACTCAGACGGGACT 2768
Sbjct 2485 -------------------------------------------------------------------------- 2484
Query 2769 TTCC 2772
Sbjct 2485 ---- 2484
