Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12232
- Subject:
- NR_104587.2
- Aligned Length:
- 2557
- Identities:
- 660
- Gaps:
- 1897
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGCTT 74
Query 1 -------------------------------------------------------------ATGTCGGCGGCGG 13
|||||||||||||
Sbjct 75 CTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGCGG 148
Query 14 GAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCGCC 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCGCC 222
Query 88 TGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAGGA 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAGGA 296
Query 162 CTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGTGA 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGTGA 370
Query 236 GAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGA 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGGGA 444
Query 310 CATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACTCC 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACTCC 518
Query 384 CATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGAGT 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGAGT 592
Query 458 TTATTTCACAGAGCAGTGTACATTCTTGTCTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTT 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTATTTCACAGAGCAGTGTACATTCTTGTCTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTT 666
Query 532 TTAATTCAGTGTCTAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCC 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTAATTCAGTGTCTAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCC 740
Query 606 AAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTA------------------- 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAAAT 814
Query 661 -------------------------------------------------------------------------- 660
Sbjct 815 GGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCAGA 888
Query 661 -------------------------------------------------------------------------- 660
Sbjct 889 AGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGACA 962
Query 661 -------------------------------------------------------------------------- 660
Sbjct 963 CAGAAGACGATGCTGACAAAATATATGAAAAACAGTAGCTCCGTATCGAATACATTGACAAATGGATGTGTCAT 1036
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1037 CAATGGACATTTGGACTTCCCCTCCACGACCCCGCTCAGTGGGATGGAAAGCAGGAATGGCCAGTGCTTGACAG 1110
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1111 GAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAGCCGTTTCCGAGTAGCCAGGGTTCTCTCTGCATTAGT 1184
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1185 GGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTGAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCC 1258
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1259 AAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGGATAACCTGTACTATGGACACTACCACG 1332
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1333 GGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAG 1406
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1407 GAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCCTAGAGACGCTGACCTGGCTCTCG 1480
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1481 GAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGTAGCAGCAACTTGAACGAATGTCACAACTT 1554
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1555 GTACGTTTTTTATATACTTCAACTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCA 1628
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1629 TGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCCTTTTTATAAGGTGCACTTTTGGAGTTT 1702
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1703 TTCTGATGCCAATCTCAACATTGTCTTTTTAATACTGTCACCAGATATTGCCATTTTTCTTTTTGTTAAAAGAT 1776
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1777 TATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCATCATTTT 1850
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1851 AAAAAGCTTGCTTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGTACAGCCTTA 1924
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1925 CAAAGATTTCTGCAGTGATTTGTGTGAAGAAGAGAACGTTTGTCTTTTTCAATGAAGCTTTGCAGATCACCATG 1998
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1999 TGGTTGAAGGTTTTAGTTGTGGACACAGTGGTCCCTCCTTAATGATGAAGATCACTGCCTTGGGCTTCATGGAA 2072
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2073 AACAGGCCCAGCCTGGGGCTGCGTTTGGATTTATTGTTTTTATTCCACACTTCCTACTTGGTCTCTGGAAGTTT 2146
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2147 TACCACATGTAACAGATTCCTTTATATGTAGTGGAAATCACTATTTGTAGAAACTGTCAGGTCAAAATATTTAA 2220
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2221 CTGACTGTTGACATGTATTTTCTTTTTTCCTTGTTTTTGTTTTTTGGGGTTTTCTGCTTTAAGATATATACCAC 2294
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2295 TATGTATATCCAGTTAACTGAGAGAATTTTGACTCTCTTAATAAAACTGCATTAAGTTTTTGATTTTGTAGAAA 2368
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2369 TTAGCTTTTGTCTAGGCAACTAGTGGTTATACTCTGCAAATATTGTAATGAATTTTTACTTTTTTGATTTTTGT 2442
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2443 AATAAAAATTGGTGCAGATAAAATGTCAAATGAACAAACCAGTGTTCTAAGAGTGTTACTAACATTTTGTTCTA 2516
Query 661 ----------------------------------------- 660
Sbjct 2517 AAACTGTCCTTCACAAATTGAATAAAAAACTCTCACACTCA 2557
