Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12232
- Subject:
- XR_002957458.1
- Aligned Length:
- 3178
- Identities:
- 566
- Gaps:
- 2612
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC 74
Query 1 ---------------------------------------------------------------ATGTCGGCGGC 11
|||||||||||
Sbjct 75 TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC 148
Query 12 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 222
Query 86 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 296
Query 160 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 370
Query 234 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 444
Query 308 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 518
Query 382 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 592
Query 456 GTTTATTTCACAGAGCAGTGTACATTCTTGTCTTCCAGGGGAACTTCAACATGGAGTTACTTTTGATCCCTCAG 529
Sbjct 593 -------------------------------------------------------------------------- 592
Query 530 TTTTAATTCAGTGTCTAAAGCCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTT 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 --------------------CCTGAGAAATGCCAGTGGCCTGACAGCAGCAGACATTGCACAAACCCAGGGTTT 646
Query 604 CCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTA----------------- 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 CCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTGTCATCTGAACCATTTCTATAACAATGGCATCTTAA 720
Query 661 -------------------------------------------------------------------------- 660
Sbjct 721 ATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTGTGGGAACAAATCGAAAGAGATGCTTGGAAGACTCA 794
Query 661 -------------------------------------------------------------------------- 660
Sbjct 795 GAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAAAGCTTGGATTCTGCCGTGCCACTCACGAATGGCGA 868
Query 661 -------------------------------------------------------------------------- 660
Sbjct 869 CACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGAGTTTGCTGTTGTAACAGGTGGGAGTGGACAGTTTC 942
Query 661 -------------------------------------------------------------------------- 660
Sbjct 943 CTGTTAGCTGCAACAACAATCCAATGGTTGAAGACACCAAACAGCAGGAGAGTGGTTCTGTTGGACCAAAAGAA 1016
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1017 ATAGAAATATATACTGTGTCAGCAATGCAGACCCCCTGTCGTTGCAGGAATCAGTATGCATATTATTTCTAACA 1090
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1091 TAAGTTTTTCTCAGATGTTTTGCACTTTGTTGTCCAGTGTCTTTTTAAAAATGTTATACTATAATTTGCATATC 1164
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1165 TTGGGCAAGTTTGTAGATACAAGAAGTGTTTTGGGTATATTCTGTGGACATGAAAAATGTAAGTGCAATCTTTA 1238
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1239 TTCTGATTTGAAGCTATTGCTTAATGTGCCTTGCTTATTTTTAATGAGGTTTGCATTTTTAATTTTCTGACATA 1312
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1313 TGGCCTTTGGGTGAATATACCGAACATGCTACAGTTAATATTTTCAAACCAATATACCACAAAGAGGACGACTA 1386
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1387 GCAGTAAACACTGAGAAACTAGTAAATGTGGTTCTGACTCAGCCCAGTCACTCCAGCATGGAATCTTTTACCCA 1460
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1461 GGACTTGGTTGCTCTGGTTTCTGTGGTCTTCATTCTGAGTCTGTTAAAATGATATGAAAAACAGTAGCTCCGTA 1534
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1535 TCGAATACATTGACAAATGGATGTGTCATCAATGGACATTTGGACTTCCCCTCCACGACCCCGCTCAGTGGGAT 1608
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1609 GGAAAGCAGGAATGGCCAGTGCTTGACAGGAACTAACGGAATTAGCAGTGGATTAGCCCCAGGACAGCCGTTTC 1682
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1683 CGAGTAGCCAGGGTTCTCTCTGCATTAGTGGGACTGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTGAGTTG 1756
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1757 TGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTAGCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGG 1830
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1831 GGATAACCTGTACTATGGACACTACCACGGGTTTGGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGG 1904
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1905 TCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCGGTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCAC 1978
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1979 GGCTCCTAGAGACGCTGACCTGGCTCTCGGAAACGCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGT 2052
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2053 AGCAGCAACTTGAACGAATGTCACAACTTGTACGTTTTTTATATACTTCAACTTTCTGAAAAAGTAAACTTCGA 2126
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2127 CAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGTAGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGT 2200
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2201 CCTTTTTATAAGGTGCACTTTTGGAGTTTTTCTGATGCCAATCTCAACATTGTCTTTTTAATACTGTCACCAGA 2274
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2275 TATTGCCATTTTTCTTTTTGTTAAAAGATTATATGATCAAGATAAATTGGGGTGGTAAATCAGGTGCCTGGTAA 2348
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2349 TTTATCTCTTTGCACATGGGCATCATTTTAAAAAGCTTGCTTCCACTCTTTTCTGTAGAATTTGACGGAACACA 2422
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2423 GCTATTTCCCTATGCAAGGTACAGCCTTACAAAGATTTCTGCAGTGATTTGTGTGAAGAAGAGAACGTTTGTCT 2496
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2497 TTTTCAATGAAGCTTTGCAGATCACCATGTGGTTGAAGGTTTTAGTTGTGGACACAGTGGTCCCTCCTTAATGA 2570
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2571 TGAAGATCACTGCCTTGGGCTTCATGGAAAACAGGCCCAGCCTGGGGCTGCGTTTGGATTTATTGTTTTTATTC 2644
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2645 CACACTTCCTACTTGGTCTCTGGAAGTTTTACCACATGTAACAGATTCCTTTATATGTAGTGGAAATCACTATT 2718
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2719 TGTAGAAACTGTCAGGTCAAAATATTTAACTGACTGTTGACATGTATTTTCTTTTTTCCTTGTTTTTGTTTTTT 2792
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2793 GGGGTTTTCTGCTTTAAGATATATACCACTATGTATATCCAGTTAACTGAGAGAATTTTGACTCTCTTAATAAA 2866
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2867 ACTGCATTAAGTTTTTGATTTTGTAGAAATTAGCTTTTGTCTAGGCAACTAGTGGTTATACTCTGCAAATATTG 2940
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2941 TAATGAATTTTTACTTTTTTGATTTTTGTAATAAAAATTGGTGCAGATAAAATGTCAAATGAACAAACCAGTGT 3014
Query 661 ---------------------------------------------------------------------- 660
Sbjct 3015 TCTAAGAGTGTTACTAACATTTTGTTCTAAAACTGTCCTTCACAAATTGAATAAAAAACTCTCACACTCA 3084
