Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12232
- Subject:
- XR_002957468.1
- Aligned Length:
- 2700
- Identities:
- 660
- Gaps:
- 2040
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCGCGCTCCGCTCGGCAGCCTGTGGGACGCGACCGCGGCGCTAGTCTCGTTCCTTTGTGCTGCGGCGGCGGC 74
Query 1 ---------------------------------------------------------------ATGTCGGCGGC 11
|||||||||||
Sbjct 75 TTCTCGAGTCCTCCCCGACGCGTCCTCTAGGCCAGCGAGCCCCGCGCTCTCCGGTGACGGACCATGTCGGCGGC 148
Query 12 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGGAGCGGGCGCGGGCGTAGAGGCGGGCTTCTCCAGCGAGGAGCTGCTCTCGCTCCGTTTCCCGCTGCACCGCG 222
Query 86 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCTGCCGCGACGGGGACCTGGCCACGCTCTGCTCGCTGCTGCAGCAGACACCCCACGCCCACCTGGCCTCTGAG 296
Query 160 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GACTCCTTCTATGGCTGGACGCCCGTGCACTGGGCCGCGCATTTCGGCAAGTTGGAGTGCTTAGTGCAGTTGGT 370
Query 234 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGAGCGGGAGCCACACTCAACGTCTCCACCACACGGTACGCGCAGACGCCAGCCCACATTGCAGCCTTTGGGG 444
Query 308 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GACATCCTCAGTGCCTGGTCTGGCTGATTCAAGCAGGAGCCAACATTAACAAACCGGATTGTGAGGGTGAAACT 518
Query 382 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCATTCACAAGGCAGCTCGCTCTGGGAGCCTAGAATGCATCAGTGCCCTTGTGGCGAATGGGGCTCACGTCGA 592
Query 456 -------------------------------------------------------------------------- 455
Sbjct 593 TAACCCCAAGAAAGGCATCAGGGTTCTGGAGTGGTTGTTTGAGTGACACAGCACAAGGCCTTGATTTCATCATG 666
Query 456 -----------------------------------GTTTATTTCACAGAGCAGTGTACATTCTTGTCTTCCAGG 494
|||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTTTTGCTGTGGATGTAGTGTAGCTTGCTGAACAGGTTTATTTCACAGAGCAGTGTACATTCTTGTCTTCCAGG 740
Query 495 GGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAAAGCCTGAGAAATGCCAGTGGC 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAACTTCAACATGGAGTTACTTTTGATCCCTCAGTTTTAATTCAGTGTCTAAAGCCTGAGAAATGCCAGTGGC 814
Query 569 CTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTG 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGACAGCAGCAGACATTGCACAAACCCAGGGTTTCCAAGAGTGTGCCCAGTTTCTCTTGAACCTCCAGAATTG 888
Query 643 TCATCTGAACCATTTCTA-------------------------------------------------------- 660
||||||||||||||||||
Sbjct 889 TCATCTGAACCATTTCTATAACAATGGCATCTTAAATGGGGGTCATCAGAATGTATTTCCTAATCATATTAGTG 962
Query 661 -------------------------------------------------------------------------- 660
Sbjct 963 TGGGAACAAATCGAAAGAGATGCTTGGAAGACTCAGAAGACTTTGGAGTAAAGAAAGCTAGAACTGAAGCTCAA 1036
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1037 AGCTTGGATTCTGCCGTGCCACTCACGAATGGCGACACAGAAGACGATGCTGACAAAATGCACGTTGATAGGGA 1110
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1111 GTTTGCTGTTGTAACAGATATGAAAAACAGTAGCTCCGTATCGAATACATTGACAAATGGATGTGTCATCAATG 1184
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1185 GACATTTGGACTTCCCCTCCACGACCCCGCTCAGTGGGATGGAAAGCAGGAATGGCCAGTGCTTGACAGGAACT 1258
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1259 AACGGAATTAGCAGTGGATTAGCCCCAGGACAGCCGTTTCCGAGTAGCCAGGGTTCTCTCTGCATTAGTGGGAC 1332
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1333 TGAGGAGCCAGAGAAGACCCTGAGAGCTAACCCTGAGTTGTGCGGTTCTCTGCACCTGAACGGGAGTCCAAGTA 1406
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1407 GCTGCATAGCCAGTAGGCCTTCCTGGGTGGAAGACATTGGGGATAACCTGTACTATGGACACTACCACGGGTTT 1480
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1481 GGGGACACTGCTGAAAGCATCCCAGAACTGAACAGTGTGGTCGAGCATTCCAAGTCCGTGAAGGTGCAGGAGCG 1554
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1555 GTACGACAGTGCCGTGCTGGGCACCATGCACCTGCACCACGGCTCCTAGAGACGCTGACCTGGCTCTCGGAAAC 1628
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1629 GCAGGAGTCCTTCCTGGTAGCCAGCTCAGAATACCCATGTAGCAGCAACTTGAACGAATGTCACAACTTGTACG 1702
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1703 TTTTTTATATACTTCAACTTTCTGAAAAAGTAAACTTCGACAAGTTCCCAGCAACTGCTTGTTTGTGCATGAGT 1776
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1777 AGGGCTTACTAAGTGCATAGATGTTTCTACAGTGAGGTGTCCTTTTTATAAGGTGCACTTTTGGAGTTTTTCTG 1850
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1851 ATGCCAATCTCAACATTGTCTTTTTAATACTGTCACCAGATATTGCCATTTTTCTTTTTGTTAAAAGATTATAT 1924
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1925 GATCAAGATAAATTGGGGTGGTAAATCAGGTGCCTGGTAATTTATCTCTTTGCACATGGGCATCATTTTAAAAA 1998
Query 661 -------------------------------------------------------------------------- 660
Sbjct 1999 GCTTGCTTCCACTCTTTTCTGTAGAATTTGACGGAACACAGCTATTTCCCTATGCAAGGTACAGCCTTACAAAG 2072
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2073 ATTTCTGCAGTGATTTGTGTGAAGAAGAGAACGTTTGTCTTTTTCAATGAAGCTTTGCAGATCACCATGTGGTT 2146
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2147 GAAGGTTTTAGTTGTGGACACAGTGGTCCCTCCTTAATGATGAAGATCACTGCCTTGGGCTTCATGGAAAACAG 2220
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2221 GCCCAGCCTGGGGCTGCGTTTGGATTTATTGTTTTTATTCCACACTTCCTACTTGGTCTCTGGAAGTTTTACCA 2294
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2295 CATGTAACAGATTCCTTTATATGTAGTGGAAATCACTATTTGTAGAAACTGTCAGGTCAAAATATTTAACTGAC 2368
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2369 TGTTGACATGTATTTTCTTTTTTCCTTGTTTTTGTTTTTTGGGGTTTTCTGCTTTAAGATATATACCACTATGT 2442
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2443 ATATCCAGTTAACTGAGAGAATTTTGACTCTCTTAATAAAACTGCATTAAGTTTTTGATTTTGTAGAAATTAGC 2516
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2517 TTTTGTCTAGGCAACTAGTGGTTATACTCTGCAAATATTGTAATGAATTTTTACTTTTTTGATTTTTGTAATAA 2590
Query 661 -------------------------------------------------------------------------- 660
Sbjct 2591 AAATTGGTGCAGATAAAATGTCAAATGAACAAACCAGTGTTCTAAGAGTGTTACTAACATTTTGTTCTAAAACT 2664
Query 661 ------------------------------------ 660
Sbjct 2665 GTCCTTCACAAATTGAATAAAAAACTCTCACACTCA 2700
