Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12258
Subject:
NM_001352168.1
Aligned Length:
1467
Identities:
783
Gaps:
684

Alignment

Query    1  ATGGAAGCACCTGACTACGAAGTGCTATCCGTGCGAGAACAGCTATTCCACGAGAGGATCCGCGAGTGTATTAT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATCAACACTTCTGTTTGCAACACTGTACATCCTCTGCCACATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCACCACAGTGGATGATGAAGATGCCACCGTCAACAAGATTGCGCTCGAGCTGTGCACCTTTACCCTGGCAATT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GCCCTGGGTGCTGTCCTGCTCCTGCCCTTCTCCATCATCAGCAATGAGGTGCTGCTCTCCCTGCCTCGGAACTA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CTACATCCAGTGGCTCAACGGCTCCCTCATCCATGGCCTCTGGAACCTTGTTTTTCTCTTCTCCAACCTGTCCC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TCATCTTCCTCATGCCCTTTGCATATTTCTTCACTGAGTCTGAGGGCTTTGCTGGCTCCAGAAAGGGTGTCCTG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GGCCGGGTCTATGAGACAGTGGTGATGTTGATGCTCCTCACTCTGCTGGTGCTAGGTATGGTGTGGGTGGCATC  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AGCCATTGTGGACAAGAACAAGGCCAACAGAGAGTCACTCTATGACTTTTGGGAGTACTATCTCCCCTACCTCT  592
                                                     |||||||||||||||||||||||||||||||||
Sbjct    1  -----------------------------------------ATGACTTTTGGGAGTACTATCTCCCCTACCTCT  33

Query  593  ACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCCTGTTGTGTACTCCACTGGGTCTCGCCCGCATGTTCTCC  666
            |||||||||||||||||||||||||||||||||||||                                     
Sbjct   34  ACTCATGCATCTCCTTCCTTGGGGTTCTGCTGCTCCT-------------------------------------  70

Query  667  GTCACTGGGAAGCTGCTAGTCAAGCCCCGGCTGCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGCCTTTGA  740
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   71  ----------------------------GGCTGCTGGAAGACCTGGAGGAGCAGCTGTACTGCTCAGCCTTTGA  116

Query  741  GGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCTGCTGGCTGCCTTTAGACATGGAGCTGCTACACA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  117  GGAGGCAGCCCTGACCCGCAGGATCTGTAATCCTACTTCCTGCTGGCTGCCTTTAGACATGGAGCTGCTACACA  190

Query  815  GACAGGTCCTGGCTCTGCAGACACAGAGGGTCCTGCTGGAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAAC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  191  GACAGGTCCTGGCTCTGCAGACACAGAGGGTCCTGCTGGAGAAGAGGCGGAAGGCTTCAGCCTGGCAACGGAAC  264

Query  889  CTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACAT  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  265  CTGGGCTACCCCCTGGCTATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCTGTGCTCATTGTGGCCATCCACAT  338

Query  963  CCTGGAGCTGCTCATCGATGAGGCTGCCATGCCCCGAGGCATG-------------------------------  1005
            |||||||||||||||||||||||||||||||||||||||||||                               
Sbjct  339  CCTGGAGCTGCTCATCGATGAGGCTGCCATGCCCCGAGGCATGCAGGGTACCTCCTTAGGCCAGGTCTCCTTCT  412

Query 1006  -----------------------------CAGGTTGTACTCATCTTTTACCTAATGGTGTCCTCAGTTGTGGGC  1050
                                         |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  413  CCAAGCTGGGCTCCTTTGGTGCCGTCATTCAGGTTGTACTCATCTTTTACCTAATGGTGTCCTCAGTTGTGGGC  486

Query 1051  TTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATAATTGGGAA  1124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  487  TTCTATAGCTCTCCACTCTTCCGGAGCCTGCGGCCCAGATGGCACGACACTGCCATGACGCAGATAATTGGGAA  560

Query 1125  CTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTCGCTTTGACC  1198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  561  CTGTGTCTGTCTCCTGGTCCTAAGCTCAGCACTTCCTGTCTTCTCTCGAACCCTGGGGCTCACTCGCTTTGACC  634

Query 1199  TGCTGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCA  1272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  635  TGCTGGGTGACTTTGGACGCTTCAACTGGCTGGGCAATTTCTACATTGTGTTCCTCTACAACGCAGCCTTTGCA  708

Query 1273  GGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCT  1346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  709  GGCCTCACCACACTCTGTCTGGTGAAGACCTTCACTGCAGCTGTGCGGGCAGAGCTGATCCGGGCCTTTGGGCT  782

Query 1347  GGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAGCACCAG  1407
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  783  GGACAGACTGCCGCTGCCCGTCTCCGGTTTCCCCCAGGCATCTAGGAAGACCCAGCACCAG  843

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