Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12268
- Subject:
- XM_011521096.1
- Aligned Length:
- 4638
- Identities:
- 834
- Gaps:
- 3804
Alignment
Query 1 ATGGCGCCAGCGAAAGCCACGAACGTGGTGCGGCTGCTACTAGGCTCCACAGCGCTGTGGCTTTCGCAGCTCGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGCCAGCGAAAGCCACGAACGTGGTGCGGCTGCTACTAGGCTCCACAGCGCTGTGGCTTTCGCAGCTCGG 74
Query 75 CTCCGGGACGGTCGCCGCGTCCAAGTCGGTGACTGCCCACTTGGCCGCGAAGTGGCCCGAGACCCCGCTGCTGC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCCGGGACGGTCGCCGCGTCCAAGTCGGTGACTGCCCACTTGGCCGCGAAGTGGCCCGAGACCCCGCTGCTGC 148
Query 149 TGGAGGCAAGTGAATTTATGGCAGAAGAAAGTAATGAAAAATTTTGGCAGTTTTTGGAAACTGTGCAAGAATTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGGCAAGTGAATTTATGGCAGAAGAAAGTAATGAAAAATTTTGGCAGTTTTTGGAAACTGTGCAAGAATTA 222
Query 223 GCAATTTATAAGCAAACAGAATCAGATTATTCTTATTACAACTTAATCCTGAAGAAAGCTGGACAGTTTCTAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCAATTTATAAGCAAACAGAATCAGATTATTCTTATTACAACTTAATCCTGAAGAAAGCTGGACAGTTTCTAGA 296
Query 297 CAATTTACACATCAACCTTTTAAAGTTTGCTTTCTCTATAAGGGCATACTCCCCAGCTATTCAGATGTTTCAGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAATTTACACATCAACCTTTTAAAGTTTGCTTTCTCTATAAGGGCATACTCCCCAGCTATTCAGATGTTTCAGC 370
Query 371 AGATTGCAGCTGATGAGCCACCACCAGATGGTTGTAATGCATTTGTGGTTATTCATAAGAAGCACACCTGTAAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGATTGCAGCTGATGAGCCACCACCAGATGGTTGTAATGCATTTGTGGTTATTCATAAGAAGCACACCTGTAAA 444
Query 445 ATTAATGAGATTAAAAAGCTGCTGAAGAAAGCTGCTTCAAGGACTAGACCTTATCTATTTAAAGGAGATCACAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTAATGAGATTAAAAAGCTGCTGAAGAAAGCTGCTTCAAGGACTAGACCTTATCTATTTAAAGGAGATCACAA 518
Query 519 ATTTCCTACAAACAAAGAGAACTTACCAGTGGTGATTCTCTATGCCGAAATGGGTACTAGAACATTTAGTGCAT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATTTCCTACAAACAAAGAGAACTTACCAGTGGTGATTCTCTATGCCGAAATGGGTACTAGAACATTTAGTGCAT 592
Query 593 TTCACAAAGTATTGTCTGAAAAAGCTCAAAATGAGGAAATTCTGTATGTTCTTCGCCATTATATTCAGAAACCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCACAAAGTATTGTCTGAAAAAGCTCAAAATGAGGAAATTCTGTATGTTCTTCGCCATTATATTCAGAAACCA 666
Query 667 AGCTCACGGAAAATGTACTTATCTGGGTATGGTGTGGAGCTAGCAATTAAGAGTACAGAATACAAAGCACTGGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCTCACGGAAAATGTACTTATCTGGGTATGGTGTGGAGCTAGCAATTAAGAGTACAGAATACAAAGCACTGGA 740
Query 741 TGATACCCAAGTTAAAACTGTGACTAATACTACTGTAGAGGATGAGACTGAAACAAATGAAGTTCAAGGATTTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGATACCCAAGTTAAAACTGTGACTAATACTACTGTAGAGGATGAGACTGAAACAAATGAAGTTCAAGGATTTC 814
Query 815 TCTTTGGGAAACTAAA--------------ATCT---------------------------------------- 834
|||||||||||||||| ||||
Sbjct 815 TCTTTGGGAAACTAAAAGAAATATATTCAGATCTTAGAGATAATCTGACAGCATTCCAAAAATACCTGATTGAG 888
Query 835 -------------------------------------------------------------------------- 834
Sbjct 889 AGTAACAAACAAATGATGCCTTTGAAAGTCTGGGAACTACAAGATCTTAGTTTTCAAGCAGCTTCTCAAATAAT 962
Query 835 -------------------------------------------------------------------------- 834
Sbjct 963 GTCCGCTCCAGTTTATGATTCCATTAAATTAATGAAAGACATTTCACAGAACTTCCCCATAAAAGCCAGATCTC 1036
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1037 TAACCAGAATTGCTGTAAATCAACATATGAGAGAAGAAATAAAGGAAAATCAAAAGGATCTTCAAGTTAGATTT 1110
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1111 AAAATTCAGCCAGGCGATGCTCGTCTATTTATAAATGGCCTTCGTGTTGATATGGATGTTTATGACGCTTTTAG 1184
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1185 TATTTTGGATATGCTGAAATTAGAAGGAAAAATGATGAATGGCCTTCGCAATCTTGGGATCAATGGGGAAGATA 1258
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1259 TGAGCAAATTTTTAAAATTAAATTCACACATTTGGGAATATACTTATGTATTAGATATTCGACATTCTTCTATA 1332
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1333 ATGTGGATTAATGACTTAGAAAATGATGATTTGTATATTACATGGCCTACAAGTTGCCAGAAACTTCTGAAGCC 1406
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1407 AGTATTTCCTGGAAGTGTACCTTCCATAAGGCGCAATTTTCATAATTTGGTTCTGTTTATTGATCCGGCCCAAG 1480
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1481 AATATACCTTGGATTTTATAAAACTTGCTGATGTTTTCTATTCTCACGAAGTTCCTCTTAGAATTGGTTTTGTG 1554
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1555 TTCATTCTTAATACAGATGATGAAGTTGATGGAGCAAATGATGCTGGAGTTGCTCTCTGGCGAGCTTTCAACTA 1628
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1629 TATTGCAGAAGAATTTGATATATCAGAAGCATTTATTTCTATAGTACACATGTACCAAAAAGTGAAGAAGGATC 1702
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1703 AAAATATACTCACTGTGGACAATGTGAAGAGTGTTCTCCAAAATACATTTCCTCATGCTAATATTTGGGATATT 1776
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1777 TTGGGAATTCATTCTAAATATGATGAAGAAAGAAAGGCTGGAGCAAGCTTTTATAAGATGACTGGCCTGGGTCC 1850
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1851 TTTGCCTCAAGCTCTTTATAATGGTGAACCCTTTAAACATGAAGAGATGAATATTAAAGAACTAAAAATGGCTG 1924
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1925 TTCTTCAAAGAATGATGGATGCATCTGTATATTTACAAAGAGAAGTTTTTTTGGGCACATTAAATGATCGCACG 1998
Query 835 -------------------------------------------------------------------------- 834
Sbjct 1999 AATGCAATTGATTTTCTAATGGATAGGAATAATGTTGTACCCCGTATAAATACTTTGATTTTGCGTACTAACCA 2072
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2073 GCAGTACCTCAATTTAATATCTACATCAGTAACTGCTGATGTTGAAGATTTCTCTACTTTCTTTTTCTTGGATT 2146
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2147 CACAAGATAAGAGTGCTGTAATTGCAAAGAACATGTATTATTTAACCCAAGACGATGAGAGTATAATTTCTGCA 2220
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2221 GTCACTCTCTGGATTATTGCAGATTTTGATAAGCCTTCTGGGAGAAAACTTCTTTTTAATGCATTAAAGCACAT 2294
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2295 GAAAACAAGTGTTCATAGTCGGTTGGGGATTATTTATAATCCTACATCAAAAATAAATGAAGAGAACACAGCTA 2368
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2369 TTTCTAGAGGAATTTTGGCAGCTTTTCTTACACAGAAGAACATGTTTTTGAGAAGCTTTCTTGGGCAACTGGCA 2442
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2443 AAGGAAGAAATTGCTACAGCTATTTACTCTGGAGATAAAATTAAAACATTCCTTATTGAGTTCTTAGGACCTTT 2516
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2517 AGATGAAGATTTTTATGCAGAAGATTTTTACTTGTTGGAAAAGATAACATTTAGTAATTTAGGAGAGAAAATTA 2590
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2591 AAGGCATTGTTGAAAATATGGGAATCAACGCAAATAACATGAGTGACTTTATTATGAAAGTTGATGCCCTTATG 2664
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2665 TCCTCTGTGCCTAAGCGTGCATCTCGATATGATGTCACATTTCTTAGGGAGAATCACAGTGTTATAAAGACGAA 2738
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2739 TCCTCAAGAGAATGATATGTTCTTCAATGTCATTGCTATTGTTGATCCATTAACAAGAGAAGCACAGAAAATGG 2812
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2813 CACAGTTGTTGGTTGTACTTGGCAAGATTATCAACATGAAGATAAAGTTGTTCATGAACTGTAGGGGCAGGCTT 2886
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2887 TCAGAAGCCCCTTTAGAAAGAATCACTGTCATTCATTATGAGCCATTCTTATTGATGGGAATATTCAGTTCTCC 2960
Query 835 -------------------------------------------------------------------------- 834
Sbjct 2961 TTCATGTGTCATTGGGCAGAAAACAGGCTTTTACCGTTTTGTTCTGGAACCAGAACTGATGTCAGGGGCTAATG 3034
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3035 ACGTTTCTTCTCTTGGACCAGTGGCAAAATTTTTGGATATTCCTGAATCACCCCTCCTAATCCTCAACATGATT 3108
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3109 ACTCCAGAAGGCTGGTTGGTTGAAACAGTGCACAGCAACTGTGACCTTGATAATATTCACTTAAAGGATACTGA 3182
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3183 GAAAACTGTTACAGCAGAATATGAACTAGAATACTTACTACTGGAAGGACAATGCTTTGATAAAGTGACAGAAC 3256
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3257 AGCCTCCTCGGGGTCTGCAGTTCACACTAGGCACAAAAAATAAACCTGCTGTGGTTGATACAATAGTGATGGCA 3330
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3331 CATCATGGGTATTTTCAATTAAAAGCAAACCCAGGTGCTTGGATACTGAGGTTACACCAAGGAAAATCTGAAGA 3404
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3405 TATTTATCAAATAGTTGGGCATGAAGGAACTGACTCTCAAGCAGACCTAGAAGATATCATTGTTGTATTAAACA 3478
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3479 GCTTCAAAAGCAAGATACTCAAAGTAAAAGTGAAAAAAGAAACAGACAAAATTAAGGAAGATATCCTTACCGAT 3552
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3553 GAAGATGAAAAAACAAAAGGACTGTGGGATTCCATTAAAAGTTTCACAGTAAGCTTGCATAAAGAAAACAAAAA 3626
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3627 GGAAAAAGATGTCCTAAACATTTTTTCAGTTGCTTCTGGTCATTTATATGAACGTTTTTTAAGAATTATGATGC 3700
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3701 TTTCTGTTTTGCGTAACACCAAAACACCAGTGAAATTCTGGTTGCTAAAAAATTATCTCTCACCGACATTTAAA 3774
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3775 GAAGTAATTCCTCACATGGCTAAAGAGTATGGATTCCGATATGAACTAGTTCAATATAGGTGGCCCCGTTGGCT 3848
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3849 TCGTCAACAGACTGAAAGACAGAGGATTATTTGGGGTTACAAAATTCTTTTCCTTGATGTTCTTTTCCCACTAG 3922
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3923 CAGTGGACAAAATCATTTTTGTTGATGCTGACCAGATTGTGAGACATGATCTAAAAGAACTTCGAGATTTCGAT 3996
Query 835 -------------------------------------------------------------------------- 834
Sbjct 3997 CTGGATGGAGCTCCTTATGGGTATACTCCATTTTGTGATAGCCGCAGGGAAATGGATGGATATCGTTTCTGGAA 4070
Query 835 -------------------------------------------------------------------------- 834
Sbjct 4071 AACAGGATACTGGGCATCACATCTTTTAAGACGGAAATACCATATCAGTGCTTTATATGTAGTGGATCTCAAGA 4144
Query 835 -------------------------------------------------------------------------- 834
Sbjct 4145 AGTTCAGGAGAATTGGAGCAGGTGACAGGCTCAGGAGCCAGTATCAAGCTCTCAGTCAAGATCCAAACAGTCTT 4218
Query 835 -------------------------------------------------------------------------- 834
Sbjct 4219 TCAAACCTAGATCAGGATCTCCCCAATAATATGATTTACCAAGTCGCCATTAAGTCTCTTCCTCAAGACTGGCT 4292
Query 835 -------------------------------------------------------------------------- 834
Sbjct 4293 GTGGTGTGAAACCTGGTGTGATGATGAATCCAAACAAAGAGCCAAAACAATTGATCTGTGCAATAATCCCAAAA 4366
Query 835 -------------------------------------------------------------------------- 834
Sbjct 4367 CAAAAGAATCCAAACTAAAAGCTGCTGCCAGAATTGTCCCAGAATGGGTGGAGTATGATGCTGAGATAAGACAA 4440
Query 835 -------------------------------------------------------------------------- 834
Sbjct 4441 CTATTAGATCATCTTGAAAACAAGAAGCAAGATACAAGCTCTACAAGAAGCATGGCAGCATCTGCTTCTGGGGA 4514
Query 835 -------------------------------------------------------------------------- 834
Sbjct 4515 AGCCTCAAGGAGCTTTTATTCATGGTGGAAGGCAAAGCAGGAGCAGGTGTCTTACATTGGAGGAACAGGACCAC 4588
Query 835 -------------------------------------------------- 834
Sbjct 4589 GAGAGAGAAGGGGAAGGTGCCACACACTTTTAAACAACCAGATCTCACAC 4638
