Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12269
- Subject:
- XM_011521095.1
- Aligned Length:
- 4689
- Identities:
- 833
- Gaps:
- 3849
Alignment
Query 1 ATGGCGCCAGCGAAAGCCACGAACGTGGTGCGGCTGCTACTAGGCTCCACAGCGCTGTGGCTTTCGCAGCTCGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGCCAGCGAAAGCCACGAACGTGGTGCGGCTGCTACTAGGCTCCACAGCGCTGTGGCTTTCGCAGCTCGG 74
Query 75 CTCCGGGACGGTCGCCGCGTCCAAGTCGGTGACTGCCCACTTGGCCGCGAAGTGGCCCGAGACCCCGCTGCTGC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCCGGGACGGTCGCCGCGTCCAAGTCGGTGACTGCCCACTTGGCCGCGAAGTGGCCCGAGACCCCGCTGCTGC 148
Query 149 TGGAGGCAAGTGAATTTATGGCAGAAGAAAGTAATGAAAAATTTTGGCAGTTTTTGGAAACTGTGCAAGAATTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGGCAAGTGAATTTATGGCAGAAGAAAGTAATGAAAAATTTTGGCAGTTTTTGGAAACTGTGCAAGAATTA 222
Query 223 GCAATTTATAAGCAAACAGAATCAGATTATTCTTATTACAACTTAATCCTGAAGAAAGCTGGACAGTTTCTAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCAATTTATAAGCAAACAGAATCAGATTATTCTTATTACAACTTAATCCTGAAGAAAGCTGGACAGTTTCTAGA 296
Query 297 CAATTTACACATCAACCTTTTAAAGTTTGCTTTCTCTATAAGGGCATACTCCCGAGCTATTCAGATGTTTCAGC 370
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 297 CAATTTACACATCAACCTTTTAAAGTTTGCTTTCTCTATAAGGGCATACTCCCCAGCTATTCAGATGTTTCAGC 370
Query 371 AGATTGCAGCTGATGAGCCACCACCAGATGGTTGTAATGCATTTGTGGTTATTCATAAGAAGCACACCTGTAAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGATTGCAGCTGATGAGCCACCACCAGATGGTTGTAATGCATTTGTGGTTATTCATAAGAAGCACACCTGTAAA 444
Query 445 ATTAATGAGATTAAAAAGCTGCTGAAGAAAGCTGCTTCAAGGACTAGACCTTATCTATTTAAAGGAGATCACAA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATTAATGAGATTAAAAAGCTGCTGAAGAAAGCTGCTTCAAGGACTAGACCTTATCTATTTAAAGGAGATCACAA 518
Query 519 ATTTCCTACAAACAAAGAGAACTTACCAGTGGTGATTCTCTATGCCGAAATGGGTACTAGAACATTTAGTGCAT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATTTCCTACAAACAAAGAGAACTTACCAGTGGTGATTCTCTATGCCGAAATGGGTACTAGAACATTTAGTGCAT 592
Query 593 TTCACAAAGTATTGTCTGAAAAAGCTCAAAATGAGGAAATTCTGTATGTTCTTCGCCATTATATTCAGAAACCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCACAAAGTATTGTCTGAAAAAGCTCAAAATGAGGAAATTCTGTATGTTCTTCGCCATTATATTCAGAAACCA 666
Query 667 AGCTCACGGAAAATGTACTTATCTGGGTATGGTGTGGAGCTAGCAATTAAGAGTACAGAATACAAAGCACTGGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCTCACGGAAAATGTACTTATCTGGGTATGGTGTGGAGCTAGCAATTAAGAGTACAGAATACAAAGCACTGGA 740
Query 741 TGATACCCAAGTTAAAACTGTGACTAATACTACTGTAGAGGATGAGACTGAAACAAATGAAGTTCAAGGATTTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGATACCCAAGTTAAAACTGTGACTAATACTACTGTAGAGGATGAGACTGAAACAAATGAAGTTCAAGGATTTC 814
Query 815 TCTTTGGGAAACTAAAGCTTGTCTAT------------------------------------------------ 840
||||||||||||||||.....|.|||
Sbjct 815 TCTTTGGGAAACTAAAAGAAATATATTCAGATCTTAGAGATAATCTGACAGCATTCCAAAAATACCTGATTGAG 888
Query 841 -------------------------------------------------------------------------- 840
Sbjct 889 AGTAACAAACAAATGATGCCTTTGAAAGTCTGGGAACTACAAGATCTTAGTTTTCAAGCAGCTTCTCAAATAAT 962
Query 841 -------------------------------------------------------------------------- 840
Sbjct 963 GTCCGCTCCAGTTTATGATTCCATTAAATTAATGAAAGACATTTCACAGAACTTCCCCATAAAAGCCAGATCTC 1036
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1037 TAACCAGAATTGCTGTAAATCAACATATGAGAGAAGAAATAAAGGAAAATCAAAAGGATCTTCAAGTTAGATTT 1110
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1111 AAAATTCAGCCAGGCGATGCTCGTCTATTTATAAATGGCCTTCGTGTTGATATGGATGTTTATGACGCTTTTAG 1184
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1185 TATTTTGGATATGCTGAAATTAGAAGGAAAAATGATGAATGGCCTTCGCAATCTTGGGATCAATGGGGAAGATA 1258
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1259 TGAGCAAATTTTTAAAATTAAATTCACACATTTGGGAATATACTTATGTATTAGATATTCGACATTCTTCTATA 1332
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1333 ATGTGGATTAATGACTTAGAAAATGATGATTTGTATATTACATGGCCTACAAGTTGCCAGAAACTTCTGAAGCC 1406
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1407 AGTATTTCCTGGAAGTGTACCTTCCATAAGGCGCAATTTTCATAATTTGGTTCTGTTTATTGATCCGGCCCAAG 1480
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1481 AATATACCTTGGATTTTATAAAACTTGCTGATGTTTTCTATTCTCACGAAGTTCCTCTTAGAATTGGTTTTGTG 1554
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1555 TTCATTCTTAATACAGATGATGAAGTTGATGGAGCAAATGATGCTGGAGTTGCTCTCTGGCGAGCTTTCAACTA 1628
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1629 TATTGCAGAAGAATTTGATATATCAGAAGCATTTATTTCTATAGTACACATGTACCAAAAAGTGAAGAAGGATC 1702
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1703 AAAATATACTCACTGTGGACAATGTGAAGAGTGTTCTCCAAAATACATTTCCTCATGCTAATATTTGGGATATT 1776
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1777 TTGGGAATTCATTCTAAATATGATGAAGAAAGAAAGGCTGGAGCAAGCTTTTATAAGATGACTGGCCTGGGTCC 1850
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1851 TTTGCCTCAAGCTCTTTATAATGGTGAACCCTTTAAACATGAAGAGATGAATATTAAAGAACTAAAAATGGCTG 1924
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1925 TTCTTCAAAGAATGATGGATGCATCTGTATATTTACAAAGAGAAGTTTTTTTGGGCACATTAAATGATCGCACG 1998
Query 841 -------------------------------------------------------------------------- 840
Sbjct 1999 AATGCAATTGATTTTCTAATGGATAGGAATAATGTTGTACCCCGTATAAATACTTTGATTTTGCGTACTAACCA 2072
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2073 GCAGTACCTCAATTTAATATCTACATCAGTAACTGCTGATGTTGAAGATTTCTCTACTTTCTTTTTCTTGGATT 2146
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2147 CACAAGATAAGAGTGCTGTAATTGCAAAGAACATGTATTATTTAACCCAAGACGATGAGAGTATAATTTCTGCA 2220
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2221 GTCACTCTCTGGATTATTGCAGATTTTGATAAGCCTTCTGGGAGAAAACTTCTTTTTAATGCATTAAAGCACAT 2294
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2295 GAAAACAAGTGTTCATAGTCGGTTGGGGATTATTTATAATCCTACATCAAAAATAAATGAAGAGAACACAGCTA 2368
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2369 TTTCTAGAGGAATTTTGGCAGCTTTTCTTACACAGAAGAACATGTTTTTGAGAAGCTTTCTTGGGCAACTGGCA 2442
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2443 AAGGAAGAAATTGCTACAGCTATTTACTCTGGAGATAAAATTAAAACATTCCTTATTGAGGGGATGGATAAGAA 2516
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2517 TGCTTTTGAGAAAAAATATAATACTGTTGGAGTGAATATTTTTCGAACTCACCAGTTGTTCTGTCAAGATGTAC 2590
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2591 TTAAATTACGTCCTGGAGAAATGGGTATTGTCAGCAATGGGAGATTCTTAGGACCTTTAGATGAAGATTTTTAT 2664
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2665 GCAGAAGATTTTTACTTGTTGGAAAAGATAACATTTAGTAATTTAGGAGAGAAAATTAAAGGCATTGTTGAAAA 2738
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2739 TATGGGAATCAACGCAAATAACATGAGTGACTTTATTATGAAAGTTGATGCCCTTATGTCCTCTGTGCCTAAGC 2812
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2813 GTGCATCTCGATATGATGTCACATTTCTTAGGGAGAATCACAGTGTTATAAAGACGAATCCTCAAGAGAATGAT 2886
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2887 ATGTTCTTCAATGTCATTGCTATTGTTGATCCATTAACAAGAGAAGCACAGAAAATGGCACAGTTGTTGGTTGT 2960
Query 841 -------------------------------------------------------------------------- 840
Sbjct 2961 ACTTGGCAAGATTATCAACATGAAGATAAAGTTGTTCATGAACTGTAGGGGCAGGCTTTCAGAAGCCCCTTTAG 3034
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3035 AAAGCTTTTACCGTTTTGTTCTGGAACCAGAACTGATGTCAGGGGCTAATGACGTTTCTTCTCTTGGACCAGTG 3108
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3109 GCAAAATTTTTGGATATTCCTGAATCACCCCTCCTAATCCTCAACATGATTACTCCAGAAGGCTGGTTGGTTGA 3182
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3183 AACAGTGCACAGCAACTGTGACCTTGATAATATTCACTTAAAGGATACTGAGAAAACTGTTACAGCAGAATATG 3256
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3257 AACTAGAATACTTACTACTGGAAGGACAATGCTTTGATAAAGTGACAGAACAGCCTCCTCGGGGTCTGCAGTTC 3330
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3331 ACACTAGGCACAAAAAATAAACCTGCTGTGGTTGATACAATAGTGATGGCACATCATGGGTATTTTCAATTAAA 3404
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3405 AGCAAACCCAGGTGCTTGGATACTGAGGTTACACCAAGGAAAATCTGAAGATATTTATCAAATAGTTGGGCATG 3478
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3479 AAGGAACTGACTCTCAAGCAGACCTAGAAGATATCATTGTTGTATTAAACAGCTTCAAAAGCAAGATACTCAAA 3552
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3553 GTAAAAGTGAAAAAAGAAACAGACAAAATTAAGGAAGATATCCTTACCGATGAAGATGAAAAAACAAAAGGACT 3626
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3627 GTGGGATTCCATTAAAAGTTTCACAGTAAGCTTGCATAAAGAAAACAAAAAGGAAAAAGATGTCCTAAACATTT 3700
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3701 TTTCAGTTGCTTCTGGTCATTTATATGAACGTTTTTTAAGAATTATGATGCTTTCTGTTTTGCGTAACACCAAA 3774
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3775 ACACCAGTGAAATTCTGGTTGCTAAAAAATTATCTCTCACCGACATTTAAAGAAGTAATTCCTCACATGGCTAA 3848
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3849 AGAGTATGGATTCCGATATGAACTAGTTCAATATAGGTGGCCCCGTTGGCTTCGTCAACAGACTGAAAGACAGA 3922
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3923 GGATTATTTGGGGTTACAAAATTCTTTTCCTTGATGTTCTTTTCCCACTAGCAGTGGACAAAATCATTTTTGTT 3996
Query 841 -------------------------------------------------------------------------- 840
Sbjct 3997 GATGCTGACCAGATTGTGAGACATGATCTAAAAGAACTTCGAGATTTCGATCTGGATGGAGCTCCTTATGGGTA 4070
Query 841 -------------------------------------------------------------------------- 840
Sbjct 4071 TACTCCATTTTGTGATAGCCGCAGGGAAATGGATGGATATCGTTTCTGGAAAACAGGATACTGGGCATCACATC 4144
Query 841 -------------------------------------------------------------------------- 840
Sbjct 4145 TTTTAAGACGGAAATACCATATCAGTGCTTTATATGTAGTGGATCTCAAGAAGTTCAGGAGAATTGGAGCAGGT 4218
Query 841 -------------------------------------------------------------------------- 840
Sbjct 4219 GACAGGCTCAGGAGCCAGTATCAAGCTCTCAGTCAAGATCCAAACAGTCTTTCAAACCTAGATCAGGATCTCCC 4292
Query 841 -------------------------------------------------------------------------- 840
Sbjct 4293 CAATAATATGATTTACCAAGTCGCCATTAAGTCTCTTCCTCAAGACTGGCTGTGGTGTGAAACCTGGTGTGATG 4366
Query 841 -------------------------------------------------------------------------- 840
Sbjct 4367 ATGAATCCAAACAAAGAGCCAAAACAATTGATCTGTGCAATAATCCCAAAACAAAAGAATCCAAACTAAAAGCT 4440
Query 841 -------------------------------------------------------------------------- 840
Sbjct 4441 GCTGCCAGAATTGTCCCAGAATGGGTGGAGTATGATGCTGAGATAAGACAACTATTAGATCATCTTGAAAACAA 4514
Query 841 -------------------------------------------------------------------------- 840
Sbjct 4515 GAAGCAAGATACAAGCTCTACAAGAAGCATGGCAGCATCTGCTTCTGGGGAAGCCTCAAGGAGCTTTTATTCAT 4588
Query 841 -------------------------------------------------------------------------- 840
Sbjct 4589 GGTGGAAGGCAAAGCAGGAGCAGGTGTCTTACATTGGAGGAACAGGACCACGAGAGAGAAGGGGAAGGTGCCAC 4662
Query 841 --------------------------- 840
Sbjct 4663 ACACTTTTAAACAACCAGATCTCACAC 4689
