Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12272
- Subject:
- NM_018328.4
- Aligned Length:
- 4494
- Identities:
- 671
- Gaps:
- 3819
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGGAGGCAAAGAGTGTGACGGAGGGGACAAGGAAGGAGGTCTTCCAGCTATACAAGTTCCTGTGGGTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGCGTCGTGTGGATCAAAATGGAGTGCTTTATGTCAGTCCCAGTGGGTCTTTGTTATCTTGCTTGGAGCAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTAAAACATACCTGCTTACTGATGGAACATGCAAGTGTGGCTTGGAATGTCCTCTTATTCTTCCCAAGGTATTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATTTTGATCCTGGAGCTGCTGTGAAACAGAGAACCGCAGAAGATGTTAAGGCAGATGAAGATGTCACAAAGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGCATACATAAAAGAAAAATTATTGCAGTGGCCACACTTCATAAAAGCATGGAAGCCCCACATCCTTCTCTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCTCACCAGTCCCGGAGGAGGAACAAATGCAACTCCAGTAGTACCTTCTCGGGCAGCAACTCCAAGATCAGTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAAATAAGTCTCATGAAGGAATTACAAATTCTGTAATGCCTGAATGTAAGAATCCTTTCAAGTTAATGATTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCATCAAATGCCATGGGAAGGCTATATGTACAAGAACTGCCTGGAAGCCAACAACAAGAACTCCACCCTGTCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCCCCGACAGAGATTGGGCAGCAGTGAACATGGACAGAAATCTCCATTCCGTGGCAGCCATGGAGGCCTGCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCCCAGCGTCATCAGGTTCCCAGATATATGGAGATGGTTCAATCTCTCCAAGGACTGACCCACTTGGAAGTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGATGTTTTCACAAGAAGTAATCCTGGTTTTCATGGAGCTCCCAATTCTAGTCCTATTCACCTGAATAGGACTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCTTTCTCCACCTTCAGTAATGCTACATGGTTCTCCTGTACAGTCATCCTGTGCAATGGCTGGAAGGACTAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATACCTCTTTCCCCAACCTTGACTACAAAGAGTCCAGTAATGAAAAAACCAATGTGTAATTTTTCAACTAATAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAAATACCACGAGCAATGTTCCACCACAAACCACCCCAAGGCCCACCTCCCCCTCCTCCACCTTCTTGTGCTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTCAGAAAAAGCCATTAACATCTGAGAAAGATCCACTTGGCATTCTTGACCCTATTCCTAGTAAACCAGTGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGAACCCTGTTATCATTAATCCAACCAGTTTCCATTCAAATGTCCACTCTCAGGTACCTATGATGAATGTAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATGCCTCCTGCTGTTGTTCCTTTGCCAAGTAATCTCCCATTGCCAACTGTAAAACCTGGTCACATGAATCATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGAGTCATGTACAAAGAGTTCAGCATTCAGCTTCAACCTCCCTGTCCCCTTCTCCAGTGACATCCCCCGTGCAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATGATGGGGACTGGAATTGGAAGGATTGAGGCATCGCCCCAAAGATCACGCTCATCTTCCACATCATCAGATCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGAAATTTCATGATGCCACCTGTAGGACCCCAGGCCACTTCTAGTGGTATTAAGGTTCCACCCAGGTCACCAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGTCAACAATAGGGTCCCCAAGGCCATCAATGCCATCAAGCCCTTCTACCAAGTCCGATGGACATCATCAGTAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAGGATATCCCTAACCCATTAATTGCTGGAATAAGTAATGTACTAAATACCCCAAGCAGTGCAGCTTTTCCTAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGCATCTGCCGGAAGTAGTTCTGTAAAGAGTCAGCCTGGTTTGCTGGGAATGCCTTTAAATCAGATCTTGAACC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGCACAATGCTGCCTCCTTTCCAGCAAGTAGTTTACTCTCAGCAGCAGCCAAAGCACAGCTAGCAAATCAAAAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAACTTGCTGGTAACAACAGTAGCAGCAGTAGCAATTCTGGAGCTGTTGCCGGCAGTGGCAACACTGAAGGACA 1850
Query 1 ----------------ATGTTCCCTCCTACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAAGTGGTCGAG 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TAGCACTTTAAACACCATGTTCCCTCCTACTGCCAACATGCTTCTCCCAACAGGTGAAGGGCAAAGTGGTCGAG 1924
Query 59 CAGCACTAAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGGAAAAGAAAACAACCACCTACGACAGTG 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CAGCACTAAGAGATAAGCTGATGTCTCAGCAAAAAGACGCATTGCGGAAAAGAAAACAACCACCTACGACAGTG 1998
Query 133 TTGAGTTTGCTCAGACAGTCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGACCTGACTTGCTAAGGAAGCA 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TTGAGTTTGCTCAGACAGTCTCAAATGGATAGTTCTGCAGTTCCTAAACCTGGACCTGACTTGCTAAGGAAGCA 2072
Query 207 GGGTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGTTACTACAGTCTATGAGTTGTCAAAGCTCTCACTTGA 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGGTCAGGGTTCATTTCCCATCAGTTCAATGTCTCAGTTACTACAGTCTATGAGTTGTCAAAGCTCTCACTTGA 2146
Query 281 GTAGCAATAGTACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCTTGCTCTGCTAACCAGCTGCATTTTACA 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GTAGCAATAGTACCCCGGGTTGTGGGGCCTCAAATACTGCTTTGCCTTGCTCTGCTAACCAGCTGCATTTTACA 2220
Query 355 GATCCCAGTATGAACTCTAGTGTTCTTCAGAACATACCTTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GATCCCAGTATGAACTCTAGTGTTCTTCAGAACATACCTTTAAGAGGGGAAGCCGTGCACTGCCACAATGCAAA 2294
Query 429 CACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAATAAATCAGATTCAGGCTA 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CACTAACTTTGTTCACAGTAACAGTCCAGTCCCCAACCACCATCTTGCAGGTTTAATAAATCAGATTCAGGCTA 2368
Query 503 GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTTAGGAAATTCCTTACATCCCAATCCACCTCAGTCA 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GCGGGAACTGTGGGATGCTCAGTCAGTCGGGCATGGCTTTAGGAAATTCCTTACATCCCAATCCACCTCAGTCA 2442
Query 577 AGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCATTGTTAGCAGCTATAATCAAACAAGTTCTGAAGC 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AGAATTTCAACGTCCTCCACTCCAGTGATACCAAACAGCATTGTTAGCAGCTATAATCAAACAAGTTCTGAAGC 2516
Query 651 AGGTATGGTT--------TTAT------TAGAAAAAAGTACCCAAA---GGTAC-------------------- 687
||| .|||| |.|| ||| |||.| ||.||
Sbjct 2517 AGG--CGGTTCAGGACCATCATCCTCCATAG----------CCATAGCGGGCACCAACCACCCTGCCATCACAA 2578
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2579 AGACAACATCTGTTCTTCAAGATGGCGTCATAGTCACCACTGCAGCTGGAAACCCACTGCAGAGTCAGCTACCC 2652
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2653 ATTGGGAGTGATTTTCCTTTTGTTGGCCAGGAGCACGCACTTCATTTTCCATCCAACAGCACTTCAAACAACCA 2726
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2727 TCTTCCACACCCCTTGAACCCCAGCCTCCTCAGTTCTCTACCTATCTCTTTGCCAGTGAATCAACAGCATCTCC 2800
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2801 TAAACCAGAATCTATTAAATATCCTCCAGCCTTCAGCAGGAGAAGGTGATATGTCATCAATAAACAATACTTTG 2874
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2875 AGTAACCATCAACTGACTCATCTACAGTCGCTGTTAAACAACAATCAGATGTTTCCTCCAAATCAGCAACAGCA 2948
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2949 GCAACTTCTCCAGGGGTACCAGAATCTCCAGGCGTTCCAAGGACAGTCCACAATTCCTTGCCCAGCTAACAATA 3022
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3023 ACCCCATGGCTTGTCTGTTTCAGAACTTTCAGGTGAGAATGCAGGAAGATGCAGCTCTCCTAAACAAAAGAATA 3096
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3097 AGCACTCAGCCTGGGCTCACAGCACTTCCTGAGAATCCAAACACTACACTTCCACCTTTTCAAGATACACCTTG 3170
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3171 TGAGTTGCAACCGAGGATTGACCCATCTCTTGGTCAACAGGTGAAGGATGGCCTCGTTGTGGGTGGCCCAGGTG 3244
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3245 ATGCTTCCGTAGATGCCATTTACAAAGCAGTTGTCGATGCAGCCAGCAAAGGAATGCAGGTTGTCATCACCACT 3318
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3319 GCAGTCAACAGTACAACTCAGATCAGCCCCATTCCAGCTCTGAGTGCCATGAGTGCCTTCACTGCCTCAATTGG 3392
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3393 TGACCCATTAAATCTCTCCAGTGCTGTCAGTGCGGTCATTCATGGACGGAACATGGGAGGTGTTGATCATGATG 3466
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3467 GTAGGCTGAGGAATTCAAGAGGGGCTCGGCTGCCCAAGAATCTAGACCATGGGAAAAATGTGAACGAAGGAGAT 3540
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3541 GGGTTTGAATATTTCAAGTCAGCAAGTTGCCACACATCCAAAAAACAGTGGGACGGGGAGCAAAGCCCCAGAGG 3614
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3615 GGAGCGAAACAGGTGGAAGTACGAGGAATTTTTAGATCATCCAGGCCATATCCACAGTAGTCCTTGTCATGAAA 3688
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3689 GGCCCAACAATGTCTCTACACTGCCATTTCTGCCTGGGGAACAGCACCCAATACTGTTACCACCAAGAAACTGT 3762
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3763 CCAGGGGATAAAATTCTAGAGGAAAATTTCAGGTATAATAACTACAAAAGAACTATGATGAGTTTTAAGGAGAG 3836
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3837 ACTAGAGAACACTGTGGAAAGATGTGCACACATAAATGGGAATAGACCTCGACAGAGTCGGGGATTTGGAGAGC 3910
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3911 TGCTAAGCACTGCAAAGCAAGACCTGGTCCTAGAGGAGCAGTCTCCAAGTTCCTCAAATAGTTTGGAAAATTCT 3984
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3985 CTGGTCAAAGACTACATCCATTACAATGGAGACTTTAATGCCAAAAGCGTTAATGGGTGTGTGCCTAGCCCTTC 4058
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4059 AGATGCTAAAAGCATTAGTAGTGAAGATGACCTAAGGAACCCAGACTCCCCCTCTTCAAATGAATTGATACATT 4132
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4133 ATAGACCAAGGACGTTCAATGTTGGCGACTTGGTCTGGGGCCAAATCAAAGGACTGACTTCCTGGCCTGGAAAA 4206
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4207 TTAGTAAGAGAAGACGACGTTCACAATTCATGTCAACAAAGCCCCGAGGAAGGGAAGGTGGAGCCCGAGAAGTT 4280
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4281 GAAGACACTAACAGAAGGTTTGGAAGCCTACAGCCGTGTCCGGAAAAGGAACAGAAAAAGTGGAAAGCTAAATA 4354
Query 688 -------------------------------------------------------------------------- 687
Sbjct 4355 ACCATTTAGAAGCTGCTATTCATGAGGCCATGAGTGAACTGGACAAAATGTCTGGGACTGTACACCAAATCCCA 4428
Query 688 ------------------------------------------------------ 687
Sbjct 4429 CAGGGTGACAGACAAATGAGACCCCCCAAACCCAAGAGGAGGAAGATCTCCAGA 4482
