Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12273
- Subject:
- NM_018351.4
- Aligned Length:
- 4290
- Identities:
- 1123
- Gaps:
- 3162
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACTTCTGCAGCCGAGATAAAGAAGCCACCAGTGGCCCCCAAGCCCAAGTTTGTTGTGGCAAATAATAAGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCCCACCTCCTATTGCACCTAAACCCGACATTGTGATTTCTAGTGTTCCACAGTCGACAAAGAAAATGAAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGCAATAGCCCCAAAACCAAAAGTCCTGAAGACCTCACCTGTTCGAGAGATTGGGCAGTCGCCATCAAGGAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCATGTTGAACCTGGAAGGGCATAAACAGGAATTAGCTGAAAGCACTGACAACTTTAATTGTAAATATGAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAATCAGAGCAATGATTATATTTCACCAATGTGTTCCTGCAGTTCTGAGTGTATCCATAAGCTGGGCCATAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGAATTTGTGTGTAAAGCAGCTTGTTTTAGAGCCCCTGGAAATGAATGAAAATTTAGAAAACAGTAAAATTGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGACTTTGACTATAAAAACTAGGAGTAAATGTGATTTGTATGGTGAAAAAGCCAAGAACCAGGGTGGGGTTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTAAAGGCAAGCGTTTTAGAAGAGGAGCTCAAAGATGCCTTAATACACCAAATGCCACCTTTTATTTCTGCAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAAGCACAGGCCCACAGACAGCCCAGAAATGAATGGTGGCTGTAATTCAAATGGACAATTCAGAATTGAATTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCGGATTTGTCACCTTCCCCATCCAGCTTTGAAAAAGTTCCTGATCATCACAGTTGCCACTTACAGCTTCCTAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGATGAATGTGAACATTTTGAAACTTGCCAGGATGACAGTGAAAAAAGCAATAATTGCTTTCAGTCATCTGAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGAGGCTCTGGAAAATGGGAAAAGGAGTACTTTAATATCTTCAGATGGAGTTAGTAAGAAATCAGAAGTCAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACCTTGGTCCCTTAGAAATTCATTTAGTACCATATACCCCAAAATTTCCAACTCCCAAGCCCAGAAAGACACG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AACTGCTCGTCTGTTACGCCAAAAGTGTGTAGATACTCCTAGTGAAAGCACTGAAGAACCGGGGAATTCAGACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTAGCTCTTCCTGTCTTACTGAAAATAGTTTGAAAATCAATAAAATCAGTGTTCTGCATCAGAATGTTTTGTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGCAGGAACAGGTGGATAAAATGAAGCTAGGAAATAAAAGTGAATTGAATATGGAATCCAACAGTGATGCACA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGACTTAGTCAATTCACAGAAAGCCATGTGTAATGAAACAACTTCCTTTGAAAAAATGGCACCTTCTTTTGATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAGACTCTAATTTGAGTTCTGACAGCACAACTGTAGATGGTTCTAGTATGTCGCTTGCTGTGGACGAAGGGACC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGTTTTATAAGATGTACTGTATCTATGAGCCTGCCTAAGCAGCTCAAATTAACTTGCAATGAACATTTGCAATC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGGAGAAACCTGGGAGTTTCTGCCCCTCAAATGCAAAAGGAATCTGTTATAAAAGAGGAAAATTCTCTACGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGTCCCCAAAAAACCTCAAAGACATAGCTTGCCTGCTACAGGAGTGCTTAAAAAGGCTGCCTCCGAGGAGCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGGAAAAAAGTTCTTATCCTTCAAGTGAAGAAAAAAGTTCAGAGAAGAGTCTAGAAAGAAATCACCTTCAGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTGTGTGCCCAAAACCGTGGTGTGTCATCCTCCTTTGATATGCCTAAACGGGCTTCAGAAAAGCCAGTGTGGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGTTACCTCATCCTATTTTACCCTTTTCAGGGAACCCAGAATTCTTAAAGTCTGTCACCGTATCGTCAAACAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAGCCTTCAACAGCCCTAACCAAGCCCAGAGCAAAATCGTTATCTGCTATGGATGTGGAAAAGTGCACTAAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTGCAAAGACTCTACAAAGAAAAACTCTTTTAAAAAGTTGCTCAGCATGAAACTGTCCATCTGTTTCATGAAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTGACTTTCAAAAATTTTGGTCCAAGAGTAGCCAACTCGGAGACACCACCACAGGCCACCTCTCCAGTGGGGAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAGAAGGGGATTGAAAGTGATTGGCAAGGCTTGTTGGTAGGAGAGGAGAAGAGAAGTAAACCCATCAAGGCATA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTCCACAGAAAACTATAGCCTGGAATCTCAAAAGAAGAGGAAGAAGTCTCGGGGCCAGACCAGTGCAGCTAATG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GTCTGAGAGCTGAGTCTTTGGATGACCAAATGCTCTCCCGGGAGTCATCATCTCAGGCACCTTACAAGTCTGTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACAAGCCTCTGTGCACCGGAGTATGAAAATATACGCCATTATGAGGAAATACCAGAGTACGAGAACTTGCCATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TATTATGGCTATACGGAAAACTCAAGAGTTGGAATGGCAGAATTCCAGCAGCATGGAGGACGCTGATGCAAATG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTATGAGGTAGAAGAGCCGTATGAAGCTCCAGATGGCCAGCTGCAGCTTGGACCCAGACATCAGCATTCCAGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCAGGAGCATCCCAGGAGGAACAGAATGATCTTGGTCTTGGTGACCTTCCCTCTGATGAGGAGGAAATCATCAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGTTCTGATGAAGATGATGTCAGCTCTGAGTCAAGTAAAGGAGAGCCTGACCCACTGGAAGATAAACAGGATG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AAGATAATGGAATGAAAAGTAAAGTTCATCATATTGCCAAGGAGATCATGAGCTCAGAGAAAGTGTTTGTGGAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GTGTTAAAACTTTTGCATATTGATTTCCGGGATGCAGTAGCTCATGCTTCCAGGCAACTTGGGAAACCAGTGAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TGAGGACCGGATTCTAAATCAGATCCTATACTACTTGCCTCAGCTGTATGAGCTCAACCGGGATCTCTTGAAGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AACTGGAGGAAAGAATGTTGCACTGGACTGAACAACAAAGAATTGCTGATATCTTTGTAAAGAAGGGACCATAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTAAAAATGTATTCCACATACATCAAAGAATTTGATAAGAATATAGCCTTGCTGGATGAACAGTGCAAGAAAAA 2960
Query 1 ----------------------------------ATGAGCCCTCGCTGTGCTAATCTGGCCCTCAAGCACTACC 40
||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 TCCAGGTTTTGCTGCTGTTGTTAGAGAATTTGAGATGAGCCCTCGCTGTGCTAATCTGGCCCTCAAGCACTACC 3034
Query 41 TGCTCAAGCCGGTTCAGAGGATCCCCCAGTACAGGCTGTTGCTGACAGATTATTTGAAGAATCTCATAGAAGAT 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TGCTCAAGCCGGTTCAGAGGATCCCCCAGTACAGGCTGTTGCTGACAGATTATTTGAAGAATCTCATAGAAGAT 3108
Query 115 GCTGGAGATTACAGAGACACTCAAGATGCCCTTGCTGTTGTTGTAGAGGTAGCCAACCACGCCAATGACACCAT 188
||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 3109 GCTGGAGATTACAGAGACACTCAAGATGCCCTTGCTGTTGTTATAGAGGTAGCCAACCACGCCAATGACACCAT 3182
Query 189 GAAGCAAGGAGACAACTTTCAGAAACTTATGCAAATTCAGTACAGCTTAAATGGACACCATGAAATTGTGCAGC 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GAAGCAAGGAGACAACTTTCAGAAACTTATGCAAATTCAGTACAGCTTAAATGGACACCATGAAATTGTGCAGC 3256
Query 263 CTGGTCGGGTTTTTCTCAAAGAAGGAATTCTGATGAAGCTGTCTCGGAAAGTGATGCAACCTCGAATGTTTTTC 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CTGGTCGGGTTTTTCTCAAAGAAGGAATTCTGATGAAGCTGTCTCGGAAAGTGATGCAACCTCGAATGTTTTTC 3330
Query 337 CTGTTTAATGATGCCCTGCTGTATACAACACCAGTGCAGTCTGGGATGTATAAACTGAACAACATGCTCTCACT 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CTGTTTAATGATGCCCTGCTGTATACAACACCAGTGCAGTCTGGGATGTATAAACTGAACAACATGCTCTCACT 3404
Query 411 GGCTGGAATGAAGGTCAGAAAACCTACCCAAGAAGCCTATCAGAATGAATTAAAGATTGAAAGTGTAGAACGTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 GGCTGGAATGAAGGTCAGAAAACCTACCCAAGAAGCCTATCAGAATGAATTAAAGATTGAAAGTGTAGAACGTT 3478
Query 485 CCTTCATTCTCTCAGCCAGTTCTGCCACAGAAAGGGATGAATGGCTAGAAGCGATTTCCAGGGCAATAGAAGAG 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 CCTTCATTCTCTCAGCCAGTTCTGCCACAGAAAGGGATGAATGGCTAGAAGCGATTTCCAGGGCAATAGAAGAG 3552
Query 559 TATGCCAAGAAAAGAATCACCTTCTGTCCTAGTAGGAGTCTTGATGAGGCAGACTCAGAAAATAAAGAAGAAGT 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TATGCCAAGAAAAGAATCACCTTCTGTCCTAGTAGGAGTCTTGATGAGGCAGACTCAGAAAATAAAGAAGAAGT 3626
Query 633 TAGTCCTCTTGGATCGAAGGCTCCCATCTGGATTCCTGATACCAGAGCCACAATGTGTATGATCTGCACAAGCG 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 TAGTCCTCTTGGATCGAAGGCTCCCATCTGGATTCCTGATACCAGAGCCACAATGTGTATGATCTGCACAAGCG 3700
Query 707 AATTCACTCTCACCTGGAGACGACACCACTGCCGGGCCTGTGGAAAGATTGTATGCCAAGCTTGTTCGTCTAAT 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 AATTCACTCTCACCTGGAGACGACACCACTGCCGGGCCTGTGGAAAGATTGTATGCCAAGCTTGTTCGTCTAAT 3774
Query 781 AAGTATGGCTTAGATTACCTGAAAAATCAACCAGCAAGAGTATGTGAACATTGTTTCCAAGAACTGCAGAAATT 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 AAGTATGGCTTAGATTACCTGAAAAATCAACCAGCAAGAGTATGTGAACATTGTTTCCAAGAACTGCAGAAATT 3848
Query 855 AGATCACCAGCACTCCCCTAGGATTGGATCTCCTGGAAATCACAAATCTCCTTCAAGTGCCTTATCATCAGTCT 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 AGATCACCAGCACTCCCCTAGGATTGGATCTCCTGGAAATCACAAATCTCCTTCAAGTGCCTTATCATCAGTCT 3922
Query 929 TACATAGCATTCCATCAGGGAGGAAACAGAAAAAAATCCCAGCTGCTCTCAAAGAAGTATCAGCAAACACAGAG 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 TACATAGCATTCCATCAGGGAGGAAACAGAAAAAAATCCCAGCTGCTCTCAAAGAAGTATCAGCAAACACAGAG 3996
Query 1003 GATTCTTCTATGAGTGGCTACTTGTACAGATCAAAGGGCAATAAAAAACCCTGGAAACACTTTTGGTTTGTCAT 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 GATTCTTCTATGAGTGGCTACTTGTACAGATCAAAGGGCAATAAAAAACCCTGGAAACACTTTTGGTTTGTCAT 4070
Query 1077 AAAAAATAAAGTACTATATACATATGCTGCAAGTGAGG------------------------------TAAGAT 1120
|||||||||||||||||||||||||||||||||||||| ||.|||
Sbjct 4071 AAAAAATAAAGTACTATATACATATGCTGCAAGTGAGGACGTGGCCGCTTTGGAGAGTCAGCCTTTATTAGGAT 4144
Query 1121 ---CTGAAATC--------------------------------------------------------------- 1128
|||..||.
Sbjct 4145 TCACTGTTATTCAAGTTAAAGATGAGAATTCCGAGTCTAAAGTATTTCAGTTACTGCACAAAAACATGTTATTT 4218
Query 1129 ------------------------------------------------------------------------ 1128
Sbjct 4219 TATGTATTCAAAGCAGAGGATGCTCATTCGGCTCAGAAGTGGATAGAAGCATTTCAGGAAGGCACAATATTG 4290
