Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12277
- Subject:
- NR_110309.2
- Aligned Length:
- 2385
- Identities:
- 1411
- Gaps:
- 972
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGTTAAGACAAAGGGTGTGCACTTCCTGGCCAGGAAACCTGAGCGGTGAGACTCCCAGCTGCCTACATCAAG 74
Query 1 ---------------------------------------------ATGAGGTCCTGCCTGTGGAGATGCAGGCA 29
|||||||||||||||||||||||||||||
Sbjct 75 GCCCCAGGACATGCAGAACCTTCCTCTAGAACCCGACCCACCACCATGAGGTCCTGCCTGTGGAGATGCAGGCA 148
Query 30 CCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGTCTTCTTTCTCTTCGCCTTGCCCTCTTTTA 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGTCTTCTTTCTCTTCGCCTTGCCCTCTTTTA 222
Query 104 TTAAGGAGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAGAGAACATTAAAGAAAGGTCTCTACAGTCCCTG 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTAAGGAGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAGAGAACATTAAAGAAAGGTCTCTACAGTCCCTG 296
Query 178 GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAGAACAA 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAGAACAA 370
Query 252 TGCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGC 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGC 444
Query 326 CGGAGGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAAAAAGAGAAAACCATG 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGGAGGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAAAAAGAGAAAACCATG 518
Query 400 GTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCACAATCATGGAAGAG 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCACAATCATGGAAGAG 592
Query 474 CCAGGACACAAAGACGACCAAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGA 547
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCAGGACACAAAGACGACCCAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGA 666
Query 548 AGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGCTCCCACA 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGCTCCCACA 740
Query 622 GGAGCAGTGTCAACAAGGACGAGACAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAACCTCA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGAGCAGTGTCAACAAGGACGAGACAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAACCTCA 814
Query 696 GGCCACCCCACCCCCTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCA 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGCCACCCCACCCCCTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCA 888
Query 770 AATCTGAGCCTCGGTGGGATTTTGAGGAAAAATACAGCTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGAC 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AATCTGAGCCTCGGTGGGATTTTGAGGAAAAATACAGCTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGAC 962
Query 844 TCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCTGGA 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCTGGA 1036
Query 918 CTCCAGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCA 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTCCAGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCA 1110
Query 992 ACTACTCCTTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCTCCTGGCCAGCCTC 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACTACTCCTTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCTCCTGGCCAGCCTC 1184
Query 1066 CCCGCTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCCACATAGG 1139
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1185 CCCGCTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCCACATGGG 1258
Query 1140 CCAGGAGATAGACAGTCACGACTACGTGTTCCGATTGAGCGGAGCTCTCATTAAAGGCTACGAACAGGATGTGG 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCAGGAGATAGACAGTCACGACTACGTGTTCCGATTGAGCGGAGCTCTCATTAAAGGCTACGAACAGGATGTGG 1332
Query 1214 GGACTCGGACATCCTTCTACGGCTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGT 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGACTCGGACATCCTTCTACGGCTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGT 1406
Query 1288 TTCAAGAACGTGCCTCTTGGGAAGGCACAGACCCCAGGAAGCTTTTCGGGAAGCCCTGCACATGGACAGGTACC 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TTCAAGAACGTGCCTCTTGGGAAGGCACAGACCCCAGGAAGCTTTTCGGGAAGCCCTGCACATGGACAGGTACC 1480
Query 1362 TGTTGCTGCACCCAGACTTTCTCCGATACATGAAGAACAGGTTTCTGAGGTC---------------------- 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGTTGCTGCACCCAGACTTTCTCCGATACATGAAGAACAGGTTTCTGAGGTCTAAGACCCTGGATGGTGCCCAC 1554
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1555 TGGAGGATATACCGCCCCACCACTGGGGCCCTCCTGCTGCTCACTGCCCTTCAGCTCTGTGACCAGGTGAGTGC 1628
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1629 TTATGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGATCACTACTATGATACATCATGGAAGCGGCTGATCT 1702
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1703 TTTACATAAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTG 1776
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1777 TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCT 1850
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1851 GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAG 1924
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1925 CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGT 1998
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1999 TCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCA 2072
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2073 ATACCACAATTCCTGCTGAAAAACACTCTTCCAGTCCAAAAGCTTCTTGATACAGAAAAAAGAGCCTGGATTTA 2146
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2147 CAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTATTACTTAACTT 2220
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2221 CACTACAGATTGTCTAGAAGACCTTTCTAGGAGTTATCTGATTCTAGAAGGGTCTATACTTGTCCTTGTCTTTA 2294
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2295 AGCTATTTGACAACTCTACGTGTTGTAGAAAACTGATAATAATACAAATGATTGTTGTCCATGGAAAGGCAAAT 2368
Query 1414 ----------------- 1413
Sbjct 2369 AAATTTTCTACAGTGAA 2385
