Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12277
- Subject:
- XR_002958047.1
- Aligned Length:
- 2437
- Identities:
- 1408
- Gaps:
- 1024
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CATTGTTAAGACAAAGGGTGTGCACTTCCTGGCCAGGAAACCTGAGCGGTGAGACTCCCAGCTGCCTACATCAA 74
Query 1 ----------------------------------------------ATGAGGTCCTGCCTGTGGAGATGCAGGC 28
||||||||||||||||||||||||||||
Sbjct 75 GGCCCCAGGACATGCAGAACCTTCCTCTAGAACCCGACCCACCACCATGAGGTCCTGCCTGTGGAGATGCAGGC 148
Query 29 ACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGTCTTCTTTCTCTTCGCCTTGCCCTCTTTT 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGTCTTCTTTCTCTTCGCCTTGCCCTCTTTT 222
Query 103 ATTAAGGAGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAGAGAACATTAAAGAAAGGTCTCTACAGTCCCT 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATTAAGGAGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAGAGAACATTAAAGAAAGGTCTCTACAGTCCCT 296
Query 177 GGCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAGAACA 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAGAACA 370
Query 251 ATGCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCG 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCG 444
Query 325 CCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAAAAAGAGAAAACCAT 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAAAAAGAGAAAACCAT 518
Query 399 GGTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCACAATCATGGAAGA 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCACAATCATGGAAGA 592
Query 473 GCCAGGACACAAAGACGACCAAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAG 546
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCAGGACACAAAGACGACCCAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAG 666
Query 547 AAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGCTCCCAC 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGCTCCCAC 740
Query 621 AGGAGCAGTGTCAACAAGGACGAGACAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAACCTC 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGGAGCAGTGTCAACAAGGACGAGACAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAACCTC 814
Query 695 AGGCCACCCCACCCCCTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTC 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGGCCACCCCACCCCCTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTC 888
Query 769 AAATCTGAGCCTCGGTGGGATTTTGAGGAAAAATACAGCTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGA 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAATCTGAGCCTCGGTGGGATTTTGAGGAAAAATACAGCTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGA 962
Query 843 CTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCTGG 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCTGG 1036
Query 917 ACTCCAGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTC 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACTCCAGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTC 1110
Query 991 AACTACTCCTTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCTCCTGGCCAGCCT 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AACTACTCCTTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCTCCTGGCCAGCCT 1184
Query 1065 CCCCGCTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCCACATAG 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1185 CCCCGCTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCCACATGG 1258
Query 1139 GCCAGGAGATAGACAGTCACGACTACGTGTTCCGATTGAGCGGAGCTCTCATTAAAGGCTACGAACAGGATGTG 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCCAGGAGATAGACAGTCACGACTACGTGTTCCGATTGAGCGGAGCTCTCATTAAAGGCTACGAACAGGATGTG 1332
Query 1213 GGGACTCGGACATCCTTCTACGGCTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGG 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGGACTCGGACATCCTTCTACGGCTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGG 1406
Query 1287 TTTCAAGAACGTGCCTCTTGGGAAGGCACAGACCCCAGGAAGCTTTTCGGGAAGCCCTGCACATGGACAGGTAC 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TTTCAAGAACGTGCCTCTTGGGAAGGCACAGACCCCAGGAAGCTTTTCGGGAAGCCCTGCACATGGACAGGTAC 1480
Query 1361 CTGTTGCTGCACCCAGACTTTCTCCGATACATGAAGAACAGGTT------------------------TCTGAG 1410
|||||||||||||||||||||||||||||||||||||||||||| .|..||
Sbjct 1481 CTGTTGCTGCACCCAGACTTTCTCCGATACATGAAGAACAGGTTAGAGCAGAAAGCACGTGACACGTAGCCCAG 1554
Query 1411 GTC----------------------------------------------------------------------- 1413
|||
Sbjct 1555 GTCCCTGTTATCCTTGCAGCCTCCTGACAGTTGGGGGTTTGGGGCATTTCACAGGTTTCTGAGGTCTAAGACCC 1628
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1629 TGGATGGTGCCCACTGGAGGATATACCGCCCCACCACTGGGGCCCTCCTGCTGCTCACTGCCCTTCAGCTCTGT 1702
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1703 GACCAGGTGAGTGCTTATGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGATCACTACTATGATACATCATG 1776
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1777 GAAGCGGCTGATCTTTTACATAAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAG 1850
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1851 GGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCA 1924
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1925 TGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCA 1998
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 1999 GACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAA 2072
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2073 TGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGG 2146
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2147 GTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCAGTCCAAAAGCTTCTTGATACAGAAAAA 2220
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2221 AGAGCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAG 2294
Query 1414 -------------------------------------------------------------------------- 1413
Sbjct 2295 GTATTACTTAACTTCACTACAGATTGTCTAGAAGACCTTTCTAGGAGTTATCTGATTCTAGAAGGGTCTATACT 2368
Query 1414 --------------------------------------------------------------------- 1413
Sbjct 2369 TGTCCTTGTCTTTAAGCTATTTGACAACTCTACGTGTTGTAGAAAACTGATAATAATACAAATGATTGT 2437
